RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 KANTRA0A1W2PQU2 76 aa0.23□□□□□ -2.37
GABPB1-209ENST00000559100 PHGR1C9JFL3 82 aa0.23□□□□□ -2.37
GABPB1-209ENST00000559100 RPL38P63173 70 aaKnown RBP0.23□□□□□ -2.37
GABPB1-209ENST00000559100 LINC00643Q86TS7 51 aa0.23□□□□□ -2.37
GABPB1-209ENST00000559100 RGPD4Q7Z3J3 1758 aa0.23□□□□□ -2.37
GABPB1-209ENST00000559100 URB1O60287 2271 aaKnown RBP0.23□□□□□ -2.37
GABPB1-209ENST00000559100 FMN2Q9NZ56 1722 aa0.23□□□□□ -2.37
GABPB1-209ENST00000559100 MYO3AQ8NEV4 1616 aa0.23□□□□□ -2.37
GABPB1-209ENST00000559100 PTPN13Q12923 2485 aa0.23□□□□□ -2.37
GABPB1-209ENST00000559100 ABCC3O15438 1527 aa0.23□□□□□ -2.37
GABPB1-209ENST00000559100 NEXMIFQ5QGS0 1516 aa0.23□□□□□ -2.37
GABPB1-209ENST00000559100 CHD6Q8TD26 2715 aa0.22□□□□□ -2.37
GABPB1-209ENST00000559100 CELSR1Q9NYQ6 3014 aa0.22□□□□□ -2.37
GABPB1-209ENST00000559100 LRRC37AA6NMS7 1700 aa0.22□□□□□ -2.37
GABPB1-209ENST00000559100 CRYBG1Q9Y4K1 1723 aa0.22□□□□□ -2.37
GABPB1-209ENST00000559100 TENM4Q6N022 2769 aa0.22□□□□□ -2.37
GABPB1-209ENST00000559100 CEBPZOSA8MTT3 80 aa0.22□□□□□ -2.37
GABPB1-209ENST00000559100 ACYP1P07311 99 aa0.22□□□□□ -2.37
GABPB1-209ENST00000559100 GAFA1Q96PS6 74 aa0.22□□□□□ -2.37
GABPB1-209ENST00000559100 HRNRQ86YZ3 2850 aaPredicted RBP0.22□□□□□ -2.37
GABPB1-209ENST00000559100 NKTRP30414 1462 aaKnown RBP0.22□□□□□ -2.37
GABPB1-209ENST00000559100 GVINP1Q7Z2Y8 2422 aa0.22□□□□□ -2.37
GABPB1-209ENST00000559100 RGPD3A6NKT7 1758 aaPredicted RBP0.22□□□□□ -2.37
GABPB1-209ENST00000559100 UACAQ9BZF9 1416 aa0.21□□□□□ -2.38
GABPB1-209ENST00000559100 LRP1Q07954 4544 aaKnown RBP0.21□□□□□ -2.38
GABPB1-209ENST00000559100 VWFP04275 2813 aa0.21□□□□□ -2.38
GABPB1-209ENST00000559100 PKD1L1Q8TDX9 2849 aa0.21□□□□□ -2.38
GABPB1-209ENST00000559100 ANKRD36A6QL64 1941 aa0.21□□□□□ -2.38
GABPB1-209ENST00000559100 HIVEP3Q5T1R4 2406 aa0.21□□□□□ -2.38
GABPB1-209ENST00000559100 CCL22O00626 93 aa0.21□□□□□ -2.38
GABPB1-209ENST00000559100 WFDC9Q8NEX5 89 aa0.21□□□□□ -2.38
GABPB1-209ENST00000559100 S100A13Q99584 98 aa0.21□□□□□ -2.38
GABPB1-209ENST00000559100 MRPL34Q9BQ48 92 aaKnown RBP0.21□□□□□ -2.38
GABPB1-209ENST00000559100 SLIT1O75093 1534 aa0.21□□□□□ -2.38
GABPB1-209ENST00000559100 KIF20BQ96Q89 1820 aa0.2□□□□□ -2.38
GABPB1-209ENST00000559100 COX7BP24311 80 aa0.2□□□□□ -2.38
GABPB1-209ENST00000559100 ADIRFQ15847 76 aa0.2□□□□□ -2.38
GABPB1-209ENST00000559100 H1FX-AS1Q4G0G2 97 aa0.2□□□□□ -2.38
GABPB1-209ENST00000559100 ABCA2Q9BZC7 2435 aa0.2□□□□□ -2.38
GABPB1-209ENST00000559100 KIAA1551Q9HCM1 1747 aa0.2□□□□□ -2.38
GABPB1-209ENST00000559100 CLIP1P30622 1438 aa0.2□□□□□ -2.38
GABPB1-209ENST00000559100 ATRQ13535 2644 aa0.19□□□□□ -2.38
GABPB1-209ENST00000559100 LRRC7Q96NW7 1537 aa0.19□□□□□ -2.38
GABPB1-209ENST00000559100 PKD1L3Q7Z443 1732 aa0.19□□□□□ -2.38
GABPB1-209ENST00000559100 COL7A1Q02388 2944 aa0.19□□□□□ -2.38
GABPB1-209ENST00000559100 WNK2Q9Y3S1 2297 aa0.19□□□□□ -2.38
GABPB1-209ENST00000559100 UBR3Q6ZT12 1888 aa0.19□□□□□ -2.38
GABPB1-209ENST00000559100 ATP7BP35670 1465 aa0.19□□□□□ -2.38
GABPB1-209ENST00000559100 TRAV21A0A0B4J279 112 aa0.19□□□□□ -2.38
GABPB1-209ENST00000559100 TDRG1Q3Y452 100 aa0.19□□□□□ -2.38
GABPB1-209ENST00000559100 NCOR1O75376 2440 aa0.19□□□□□ -2.38
GABPB1-209ENST00000559100 DMBT1Q9UGM3 2413 aaPredicted RBP0.19□□□□□ -2.38
GABPB1-209ENST00000559100 SYNE1Q8NF91 8797 aaKnown RBP0.19□□□□□ -2.38
GABPB1-209ENST00000559100 COL14A1Q05707 1796 aaKnown RBP0.19□□□□□ -2.38
GABPB1-209ENST00000559100 RB1CC1Q8TDY2 1594 aa0.19□□□□□ -2.38
GABPB1-209ENST00000559100 KIF14Q15058 1648 aa0.18□□□□□ -2.38
GABPB1-209ENST00000559100 NDUFB1O75438 58 aa0.18□□□□□ -2.38
GABPB1-209ENST00000559100 CDKN2A-AS1Q9UH64 79 aa0.18□□□□□ -2.38
GABPB1-209ENST00000559100 UBR1Q8IWV7 1749 aa0.18□□□□□ -2.38
GABPB1-209ENST00000559100 CCDC18Q5T9S5 1454 aa0.17□□□□□ -2.38
GABPB1-209ENST00000559100 MAGI2Q86UL8 1455 aa0.17□□□□□ -2.38
GABPB1-209ENST00000559100 SUPT6HQ7KZ85 1726 aaKnown RBP0.17□□□□□ -2.38
GABPB1-209ENST00000559100 ST20Q9HBF5 79 aa0.17□□□□□ -2.38
GABPB1-209ENST00000559100 SPTA1P02549 2419 aa0.17□□□□□ -2.38
GABPB1-209ENST00000559100 CACNA1AO00555 2505 aa0.16□□□□□ -2.38
GABPB1-209ENST00000559100 FLNCQ14315 2725 aa0.16□□□□□ -2.38
GABPB1-209ENST00000559100 ALKQ9UM73 1620 aa0.16□□□□□ -2.38
GABPB1-209ENST00000559100 LRRC9Q6ZRR7 1453 aa0.16□□□□□ -2.38
GABPB1-209ENST00000559100 CSPG4Q6UVK1 2322 aa0.15□□□□□ -2.38
GABPB1-209ENST00000559100 FAT2Q9NYQ8 4349 aa0.15□□□□□ -2.38
GABPB1-209ENST00000559100 HUWE1Q7Z6Z7 4374 aaKnown RBP0.15□□□□□ -2.39
GABPB1-209ENST00000559100 RGPD2P0DJD1 1756 aa0.15□□□□□ -2.39
GABPB1-209ENST00000559100 A0A087WXM4 84 aa0.15□□□□□ -2.39
GABPB1-209ENST00000559100 PRM1P04553 51 aa0.15□□□□□ -2.39
GABPB1-209ENST00000559100 WFDC13Q8IUB5 93 aa0.15□□□□□ -2.39
GABPB1-209ENST00000559100 MAP3K4Q9Y6R4 1608 aa0.15□□□□□ -2.39
GABPB1-209ENST00000559100 PPLO60437 1756 aa0.14□□□□□ -2.39
GABPB1-209ENST00000559100 H3BUT2 72 aa0.14□□□□□ -2.39
GABPB1-209ENST00000559100 IFI27P40305 119 aaPredicted RBP0.14□□□□□ -2.39
GABPB1-209ENST00000559100 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
GABPB1-209ENST00000559100 DCHS2Q6V1P9 2916 aa0.14□□□□□ -2.39
GABPB1-209ENST00000559100 URB2Q14146 1524 aaKnown RBP0.13□□□□□ -2.39
GABPB1-209ENST00000559100 BSNQ9UPA5 3926 aa0.13□□□□□ -2.39
GABPB1-209ENST00000559100 UMAD1C9J7I0 102 aa0.13□□□□□ -2.39
GABPB1-209ENST00000559100 M0R2T5 61 aa0.13□□□□□ -2.39
GABPB1-209ENST00000559100 LELP1Q5T871 98 aa0.13□□□□□ -2.39
GABPB1-209ENST00000559100 BCORQ6W2J9 1755 aa0.13□□□□□ -2.39
GABPB1-209ENST00000559100 SETXQ7Z333 2677 aaKnown RBP0.13□□□□□ -2.39
GABPB1-209ENST00000559100 MED14O60244 1454 aa0.12□□□□□ -2.39
GABPB1-209ENST00000559100 NCOA2Q15596 1464 aa0.12□□□□□ -2.39
GABPB1-209ENST00000559100 NDUFA3O95167 84 aa0.12□□□□□ -2.39
GABPB1-209ENST00000559100 ATP5EP2Q5VTU8 51 aa0.12□□□□□ -2.39
GABPB1-209ENST00000559100 NSD1Q96L73 2696 aaPredicted RBP0.12□□□□□ -2.39
GABPB1-209ENST00000559100 CHD8Q9HCK8 2581 aa0.12□□□□□ -2.39
GABPB1-209ENST00000559100 RGPD1P0DJD0 1748 aa0.12□□□□□ -2.39
GABPB1-209ENST00000559100 QSER1Q2KHR3 1735 aa0.12□□□□□ -2.39
GABPB1-209ENST00000559100 KMT2AQ03164 3969 aa0.12□□□□□ -2.39
GABPB1-209ENST00000559100 REV3LO60673 3130 aa0.11□□□□□ -2.39
GABPB1-209ENST00000559100 SMIM13P0DJ93 91 aa0.11□□□□□ -2.39
GABPB1-209ENST00000559100 DEFB135Q30KP9 77 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms