RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PAPPA2Q9BXP8 1791 aa-0.29□□□□□ -2.46
CASC4-206ENST00000558847 CCL22O00626 93 aa-0.3□□□□□ -2.46
CASC4-206ENST00000558847 LEPROTL1O95214 131 aa-0.3□□□□□ -2.46
CASC4-206ENST00000558847 KRTAP19-7Q3SYF9 63 aa-0.3□□□□□ -2.46
CASC4-206ENST00000558847 FMN2Q9NZ56 1722 aa-0.3□□□□□ -2.46
CASC4-206ENST00000558847 CUX1P39880 1505 aa-0.31□□□□□ -2.46
CASC4-206ENST00000558847 KMT2AQ03164 3969 aa-0.31□□□□□ -2.46
CASC4-206ENST00000558847 FANCAO15360 1455 aa-0.31□□□□□ -2.46
CASC4-206ENST00000558847 PDZD2O15018 2839 aa-0.31□□□□□ -2.46
CASC4-206ENST00000558847 SAMD9Q5K651 1589 aa-0.32□□□□□ -2.46
CASC4-206ENST00000558847 ZANQ9Y493 2812 aa-0.32□□□□□ -2.46
CASC4-206ENST00000558847 SPTY2D1-AS1A0A0U1RR47 76 aa-0.32□□□□□ -2.46
CASC4-206ENST00000558847 GYPAP02724 150 aa-0.32□□□□□ -2.46
CASC4-206ENST00000558847 SMIM11AP58511 58 aa-0.32□□□□□ -2.46
CASC4-206ENST00000558847 PKIAP61925 76 aa-0.32□□□□□ -2.46
CASC4-206ENST00000558847 PSENENQ9NZ42 101 aa-0.32□□□□□ -2.46
CASC4-206ENST00000558847 LRP2P98164 4655 aa-0.32□□□□□ -2.46
CASC4-206ENST00000558847 MUC2Q02817 5179 aa-0.32□□□□□ -2.46
CASC4-206ENST00000558847 SLIT1O75093 1534 aa-0.33□□□□□ -2.46
CASC4-206ENST00000558847 F8WEM9 126 aa-0.33□□□□□ -2.46
CASC4-206ENST00000558847 SRRM2Q9UQ35 2752 aaKnown RBP-0.33□□□□□ -2.46
CASC4-206ENST00000558847 ACANP16112 2415 aa-0.33□□□□□ -2.46
CASC4-206ENST00000558847 KIAA1551Q9HCM1 1747 aa-0.33□□□□□ -2.46
CASC4-206ENST00000558847 MARF1Q9Y4F3 1742 aaKnown RBP-0.33□□□□□ -2.46
CASC4-206ENST00000558847 CLTCQ00610 1675 aaKnown RBP-0.33□□□□□ -2.46
CASC4-206ENST00000558847 CLIP1P30622 1438 aa-0.34□□□□□ -2.46
CASC4-206ENST00000558847 H1FX-AS1Q4G0G2 97 aa-0.34□□□□□ -2.46
CASC4-206ENST00000558847 DCHS2Q6V1P9 2916 aa-0.34□□□□□ -2.46
CASC4-206ENST00000558847 MRPL34Q9BQ48 92 aaKnown RBP-0.34□□□□□ -2.46
CASC4-206ENST00000558847 TENM2Q9NT68 2774 aa-0.34□□□□□ -2.46
CASC4-206ENST00000558847 ABCC10Q5T3U5 1492 aa-0.35□□□□□ -2.46
CASC4-206ENST00000558847 SETXQ7Z333 2677 aaKnown RBP-0.35□□□□□ -2.47
CASC4-206ENST00000558847 C5P01031 1676 aa-0.36□□□□□ -2.47
CASC4-206ENST00000558847 MON2Q7Z3U7 1717 aa-0.36□□□□□ -2.47
CASC4-206ENST00000558847 ATP10BO94823 1461 aa-0.36□□□□□ -2.47
CASC4-206ENST00000558847 ALMS1Q8TCU4 4167 aa-0.36□□□□□ -2.47
CASC4-206ENST00000558847 FLNBO75369 2602 aaKnown RBP-0.37□□□□□ -2.47
CASC4-206ENST00000558847 IGLC2P0DOY2 106 aa-0.37□□□□□ -2.47
CASC4-206ENST00000558847 IGLC3P0DOY3 106 aa-0.37□□□□□ -2.47
CASC4-206ENST00000558847 KRTAP19-8Q3LI54 63 aa-0.37□□□□□ -2.47
CASC4-206ENST00000558847 SNHG12Q9BXW3 62 aa-0.37□□□□□ -2.47
CASC4-206ENST00000558847 KRTAP20-2Q3LI61 65 aa-0.38□□□□□ -2.47
CASC4-206ENST00000558847 UBE2D4Q9Y2X8 147 aa-0.38□□□□□ -2.47
CASC4-206ENST00000558847 FAT2Q9NYQ8 4349 aa-0.39□□□□□ -2.47
CASC4-206ENST00000558847 CDKN2A-AS1Q9UH64 79 aa-0.39□□□□□ -2.47
CASC4-206ENST00000558847 MAP1AP78559 2803 aaPredicted RBP-0.39□□□□□ -2.47
CASC4-206ENST00000558847 COL6A3P12111 3177 aa-0.39□□□□□ -2.47
CASC4-206ENST00000558847 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.4□□□□□ -2.47
CASC4-206ENST00000558847 ANKRD36A6QL64 1941 aa-0.4□□□□□ -2.47
CASC4-206ENST00000558847 CREBBPQ92793 2442 aa-0.4□□□□□ -2.47
CASC4-206ENST00000558847 HMGN2P05204 90 aaKnown RBP-0.4□□□□□ -2.47
CASC4-206ENST00000558847 MT4P47944 62 aa-0.4□□□□□ -2.47
CASC4-206ENST00000558847 PEA15Q15121 130 aa-0.4□□□□□ -2.47
CASC4-206ENST00000558847 DEFB112Q30KQ8 113 aa-0.4□□□□□ -2.47
CASC4-206ENST00000558847 TROQ12816 1431 aaPredicted RBP-0.4□□□□□ -2.47
CASC4-206ENST00000558847 DEFB135Q30KP9 77 aa-0.41□□□□□ -2.48
CASC4-206ENST00000558847 HEPN1Q6WQI6 88 aa-0.41□□□□□ -2.48
CASC4-206ENST00000558847 C9orf62Q8N4C0 152 aa-0.41□□□□□ -2.48
CASC4-206ENST00000558847 HIGD1BQ9P298 99 aa-0.41□□□□□ -2.48
CASC4-206ENST00000558847 NBEAL1Q6ZS30 2694 aa-0.41□□□□□ -2.48
CASC4-206ENST00000558847 CNOT1A5YKK6 2376 aaKnown RBP-0.42□□□□□ -2.48
CASC4-206ENST00000558847 CRYBG1Q9Y4K1 1723 aa-0.43□□□□□ -2.48
CASC4-206ENST00000558847 PLGLAQ15195 96 aa-0.43□□□□□ -2.48
CASC4-206ENST00000558847 NMSQ5H8A3 153 aa-0.43□□□□□ -2.48
CASC4-206ENST00000558847 NF1P21359 2839 aa-0.43□□□□□ -2.48
CASC4-206ENST00000558847 PCLOQ9Y6V0 5065 aa-0.43□□□□□ -2.48
CASC4-206ENST00000558847 CCNB3Q8WWL7 1395 aa-0.44□□□□□ -2.48
CASC4-206ENST00000558847 RPL38P63173 70 aaKnown RBP-0.44□□□□□ -2.48
CASC4-206ENST00000558847 KMT2CQ8NEZ4 4911 aaKnown RBP-0.44□□□□□ -2.48
CASC4-206ENST00000558847 ANKRD26Q9UPS8 1709 aa-0.44□□□□□ -2.48
CASC4-206ENST00000558847 HERC1Q15751 4861 aa-0.44□□□□□ -2.48
CASC4-206ENST00000558847 STAB2Q8WWQ8 2551 aa-0.45□□□□□ -2.48
CASC4-206ENST00000558847 A0A1B0GUT8 65 aa-0.45□□□□□ -2.48
CASC4-206ENST00000558847 Q9H521 79 aa-0.45□□□□□ -2.48
CASC4-206ENST00000558847 COL14A1Q05707 1796 aaKnown RBP-0.45□□□□□ -2.48
CASC4-206ENST00000558847 MAGI2Q86UL8 1455 aa-0.46□□□□□ -2.48
CASC4-206ENST00000558847 CYB5AP00167 134 aa-0.46□□□□□ -2.48
CASC4-206ENST00000558847 PYY3Q5JQD4 70 aa-0.46□□□□□ -2.48
CASC4-206ENST00000558847 C20orf78Q9BR46 151 aa-0.46□□□□□ -2.48
CASC4-206ENST00000558847 KIF20BQ96Q89 1820 aa-0.46□□□□□ -2.48
CASC4-206ENST00000558847 BSNQ9UPA5 3926 aa-0.46□□□□□ -2.48
CASC4-206ENST00000558847 CEP162Q5TB80 1403 aa-0.47□□□□□ -2.48
CASC4-206ENST00000558847 PCNX1Q96RV3 2341 aa-0.47□□□□□ -2.48
CASC4-206ENST00000558847 LRP1BQ9NZR2 4599 aa-0.47□□□□□ -2.48
CASC4-206ENST00000558847 COX7BP24311 80 aa-0.47□□□□□ -2.48
CASC4-206ENST00000558847 HECTD4Q9Y4D8 3996 aa-0.47□□□□□ -2.49
CASC4-206ENST00000558847 DOPEY1Q5JWR5 2465 aa-0.48□□□□□ -2.49
CASC4-206ENST00000558847 FAT1Q14517 4588 aa-0.48□□□□□ -2.49
CASC4-206ENST00000558847 COX6B2Q6YFQ2 88 aa-0.48□□□□□ -2.49
CASC4-206ENST00000558847 TGP01266 2768 aa-0.49□□□□□ -2.49
CASC4-206ENST00000558847 AKAP12Q02952 1782 aa-0.49□□□□□ -2.49
CASC4-206ENST00000558847 V9GYS6 101 aa-0.49□□□□□ -2.49
CASC4-206ENST00000558847 MYH4Q9Y623 1939 aa-0.49□□□□□ -2.49
CASC4-206ENST00000558847 PKD1L3Q7Z443 1732 aa-0.5□□□□□ -2.49
CASC4-206ENST00000558847 HERC2O95714 4834 aa-0.5□□□□□ -2.49
CASC4-206ENST00000558847 LAMA5O15230 3695 aa-0.5□□□□□ -2.49
CASC4-206ENST00000558847 MYO3AQ8NEV4 1616 aa-0.5□□□□□ -2.49
CASC4-206ENST00000558847 ALKQ9UM73 1620 aa-0.5□□□□□ -2.49
CASC4-206ENST00000558847 SPRR2AP35326 72 aa-0.51□□□□□ -2.49
CASC4-206ENST00000558847 ATP7BP35670 1465 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms