RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 IFITM2Q01629 132 aa4.8□□□□□ -1.64
TRAF3-205ENST00000558700 FABP9Q0Z7S8 132 aa4.8□□□□□ -1.64
TRAF3-205ENST00000558700 COMMD7Q86VX2 200 aa4.8□□□□□ -1.64
TRAF3-205ENST00000558700 HBDP02042 147 aa4.79□□□□□ -1.64
TRAF3-205ENST00000558700 IGLC3P0DOY3 106 aa4.79□□□□□ -1.64
TRAF3-205ENST00000558700 UBE2AP49459 152 aa4.79□□□□□ -1.64
TRAF3-205ENST00000558700 PRR4Q16378 134 aa4.79□□□□□ -1.64
TRAF3-205ENST00000558700 LINC00167Q96N53 147 aa4.79□□□□□ -1.64
TRAF3-205ENST00000558700 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
TRAF3-205ENST00000558700 RPS10P5Q9NQ39 176 aa4.79□□□□□ -1.64
TRAF3-205ENST00000558700 RNF213Q63HN8 5207 aa4.78□□□□□ -1.64
TRAF3-205ENST00000558700 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
TRAF3-205ENST00000558700 CRYGAP11844 174 aa4.78□□□□□ -1.64
TRAF3-205ENST00000558700 ZNF22P17026 224 aaPredicted RBP4.78□□□□□ -1.64
TRAF3-205ENST00000558700 NDUFA6P56556 154 aa4.78□□□□□ -1.64
TRAF3-205ENST00000558700 RAB5BP61020 215 aa4.78□□□□□ -1.64
TRAF3-205ENST00000558700 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
TRAF3-205ENST00000558700 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
TRAF3-205ENST00000558700 PFN2P35080 140 aa4.77□□□□□ -1.65
TRAF3-205ENST00000558700 C10orf91Q5T1B1 145 aa4.77□□□□□ -1.65
TRAF3-205ENST00000558700 SFTA2Q6UW10 78 aa4.77□□□□□ -1.65
TRAF3-205ENST00000558700 TYMSOSQ8TAI1 123 aa4.77□□□□□ -1.65
TRAF3-205ENST00000558700 C18orf32Q8TCD1 76 aa4.77□□□□□ -1.65
TRAF3-205ENST00000558700 ERG28Q9UKR5 140 aa4.77□□□□□ -1.65
TRAF3-205ENST00000558700 IGKV2-28A0A075B6P5 120 aa4.76□□□□□ -1.65
TRAF3-205ENST00000558700 A0A087X002 238 aa4.76□□□□□ -1.65
TRAF3-205ENST00000558700 A0A096LNJ9 63 aa4.76□□□□□ -1.65
TRAF3-205ENST00000558700 IGKV2D-28P01615 120 aa4.76□□□□□ -1.65
TRAF3-205ENST00000558700 LINC00614P0C842 121 aa4.76□□□□□ -1.65
TRAF3-205ENST00000558700 COX17Q14061 63 aa4.76□□□□□ -1.65
TRAF3-205ENST00000558700 Q6ZVQ6 151 aa4.76□□□□□ -1.65
TRAF3-205ENST00000558700 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
TRAF3-205ENST00000558700 LINC00518Q8N0U6 118 aa4.76□□□□□ -1.65
TRAF3-205ENST00000558700 TRAPPC1Q9Y5R8 145 aa4.76□□□□□ -1.65
TRAF3-205ENST00000558700 C11orf86A6NJI1 115 aa4.75□□□□□ -1.65
TRAF3-205ENST00000558700 PMCHL1Q16048 86 aa4.75□□□□□ -1.65
TRAF3-205ENST00000558700 NDUFA5Q16718 116 aa4.75□□□□□ -1.65
TRAF3-205ENST00000558700 FAM229BQ4G0N7 80 aa4.75□□□□□ -1.65
TRAF3-205ENST00000558700 TMEM170BQ5T4T1 132 aa4.75□□□□□ -1.65
TRAF3-205ENST00000558700 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
TRAF3-205ENST00000558700 SND1-IT1Q9HBX3 110 aa4.75□□□□□ -1.65
TRAF3-205ENST00000558700 SCO1O75880 301 aa4.74□□□□□ -1.65
TRAF3-205ENST00000558700 TSPAN13O95857 204 aa4.74□□□□□ -1.65
TRAF3-205ENST00000558700 IGKV2-30P06310 120 aa4.74□□□□□ -1.65
TRAF3-205ENST00000558700 PRLHP81277 87 aa4.74□□□□□ -1.65
TRAF3-205ENST00000558700 BAGE3Q86Y29 109 aa4.74□□□□□ -1.65
TRAF3-205ENST00000558700 SNAPINO95295 136 aa4.73□□□□□ -1.65
TRAF3-205ENST00000558700 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
TRAF3-205ENST00000558700 FAM19A1Q7Z5A9 133 aa4.73□□□□□ -1.65
TRAF3-205ENST00000558700 LINC00304Q8N9R0 145 aa4.73□□□□□ -1.65
TRAF3-205ENST00000558700 ZNF625Q96I27 306 aaPredicted RBP4.73□□□□□ -1.65
TRAF3-205ENST00000558700 TMEM126AQ9H061 195 aa4.73□□□□□ -1.65
TRAF3-205ENST00000558700 IGKV2D-26A0A0A0MRZ7 120 aa4.72□□□□□ -1.65
TRAF3-205ENST00000558700 A0A0U1RQV1 116 aa4.72□□□□□ -1.65
TRAF3-205ENST00000558700 APOC3P02656 99 aa4.72□□□□□ -1.65
TRAF3-205ENST00000558700 SVBPQ8N300 66 aa4.72□□□□□ -1.65
TRAF3-205ENST00000558700 ANAPC11Q9NYG5 84 aa4.72□□□□□ -1.65
TRAF3-205ENST00000558700 CHTOPQ9Y3Y2 248 aaKnown RBP4.72□□□□□ -1.65
TRAF3-205ENST00000558700 LPAP08519 4548 aa4.72□□□□□ -1.65
TRAF3-205ENST00000558700 TRAV12-1A0A0B4J245 112 aa4.71□□□□□ -1.66
TRAF3-205ENST00000558700 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.66
TRAF3-205ENST00000558700 TMEM238C9JI98 176 aa4.71□□□□□ -1.66
TRAF3-205ENST00000558700 M0R378 163 aa4.71□□□□□ -1.66
TRAF3-205ENST00000558700 LINC00158P58513 81 aa4.71□□□□□ -1.66
TRAF3-205ENST00000558700 KRTAP13-2Q52LG2 175 aa4.71□□□□□ -1.66
TRAF3-205ENST00000558700 CHCHD1Q96BP2 118 aaKnown RBP4.71□□□□□ -1.66
TRAF3-205ENST00000558700 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.66
TRAF3-205ENST00000558700 TMEM223A0PJW6 202 aa4.7□□□□□ -1.66
TRAF3-205ENST00000558700 CTAG1AP78358 180 aa4.7□□□□□ -1.66
TRAF3-205ENST00000558700 CBLN2Q8IUK8 224 aa4.7□□□□□ -1.66
TRAF3-205ENST00000558700 Q8NDZ9 215 aa4.7□□□□□ -1.66
TRAF3-205ENST00000558700 ZNF706Q9Y5V0 76 aaPredicted RBP4.7□□□□□ -1.66
TRAF3-205ENST00000558700 MEIG1Q5JSS6 88 aa4.69□□□□□ -1.66
TRAF3-205ENST00000558700 IFI27L1Q96BM0 104 aa4.69□□□□□ -1.66
TRAF3-205ENST00000558700 HIGD2AQ9BW72 106 aa4.69□□□□□ -1.66
TRAF3-205ENST00000558700 PCP4L1A6NKN8 68 aa4.68□□□□□ -1.66
TRAF3-205ENST00000558700 H0Y8G0 127 aa4.68□□□□□ -1.66
TRAF3-205ENST00000558700 HSBP1O75506 76 aa4.68□□□□□ -1.66
TRAF3-205ENST00000558700 RETNLBQ9BQ08 111 aa4.68□□□□□ -1.66
TRAF3-205ENST00000558700 LINC00587B1AMM8 73 aa4.67□□□□□ -1.66
TRAF3-205ENST00000558700 S100A12P80511 92 aa4.67□□□□□ -1.66
TRAF3-205ENST00000558700 TPRXLQ17RH7 258 aa4.67□□□□□ -1.66
TRAF3-205ENST00000558700 BOD1L2Q8IYS8 172 aa4.67□□□□□ -1.66
TRAF3-205ENST00000558700 PLEKHB2Q96CS7 222 aa4.67□□□□□ -1.66
TRAF3-205ENST00000558700 YPEL4Q96NS1 127 aa4.67□□□□□ -1.66
TRAF3-205ENST00000558700 MAP1LC3CQ9BXW4 147 aa4.67□□□□□ -1.66
TRAF3-205ENST00000558700 NCR3O14931 201 aa4.66□□□□□ -1.66
TRAF3-205ENST00000558700 SMIM13P0DJ93 91 aa4.66□□□□□ -1.66
TRAF3-205ENST00000558700 C3orf22Q8N5N4 141 aa4.66□□□□□ -1.66
TRAF3-205ENST00000558700 MIR7-3HGQ8N6C7 128 aa4.66□□□□□ -1.66
TRAF3-205ENST00000558700 SPRR4Q96PI1 79 aa4.66□□□□□ -1.66
TRAF3-205ENST00000558700 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
TRAF3-205ENST00000558700 NDUFA12Q9UI09 145 aa4.66□□□□□ -1.66
TRAF3-205ENST00000558700 IGLV7-46A0A075B6I9 117 aa4.65□□□□□ -1.67
TRAF3-205ENST00000558700 MYMXA0A1B0GTQ4 84 aa4.65□□□□□ -1.67
TRAF3-205ENST00000558700 ETDCA0A1B0GVM5 59 aa4.65□□□□□ -1.67
TRAF3-205ENST00000558700 SPAG11AQ6PDA7 123 aa4.65□□□□□ -1.67
TRAF3-205ENST00000558700 LINC00337Q8N6G1 96 aa4.65□□□□□ -1.67
TRAF3-205ENST00000558700 LEPROTL1O95214 131 aa4.64□□□□□ -1.67
TRAF3-205ENST00000558700 PLNP26678 52 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms