RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 LAMA5O15230 3695 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 ABCC5O15440 1437 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 NDUFC1O43677 76 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 KRTAP20-2Q3LI61 65 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 MON2Q7Z3U7 1717 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 C2orf88Q9BSF0 95 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 NBASA2RRP1 2371 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 SPTBN4Q9H254 2564 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 TRBV7-7A0A0K0K1E9 115 aa-0.69□□□□□ -2.52
LINC00871-203ENST00000556869 UQCRHP07919 91 aa-0.69□□□□□ -2.52
LINC00871-203ENST00000556869 CDKN2A-AS1Q9UH64 79 aa-0.69□□□□□ -2.52
LINC00871-203ENST00000556869 MLH3Q9UHC1 1453 aa-0.69□□□□□ -2.52
LINC00871-203ENST00000556869 C5P01031 1676 aa-0.69□□□□□ -2.52
LINC00871-203ENST00000556869 KNL1Q8NG31 2342 aa-0.7□□□□□ -2.52
LINC00871-203ENST00000556869 LINC00587B1AMM8 73 aa-0.7□□□□□ -2.52
LINC00871-203ENST00000556869 LELP1Q5T871 98 aa-0.7□□□□□ -2.52
LINC00871-203ENST00000556869 WFDC13Q8IUB5 93 aa-0.7□□□□□ -2.52
LINC00871-203ENST00000556869 FAM135AQ9P2D6 1515 aa-0.7□□□□□ -2.52
LINC00871-203ENST00000556869 CLIP1P30622 1438 aa-0.71□□□□□ -2.52
LINC00871-203ENST00000556869 NCOA3Q9Y6Q9 1424 aa-0.71□□□□□ -2.52
LINC00871-203ENST00000556869 C20orf202A1L168 122 aa-0.71□□□□□ -2.52
LINC00871-203ENST00000556869 TRGV9Q99603 122 aa-0.71□□□□□ -2.52
LINC00871-203ENST00000556869 PMCHL2Q9BQD1 86 aa-0.71□□□□□ -2.52
LINC00871-203ENST00000556869 HIGD1BQ9P298 99 aa-0.71□□□□□ -2.52
LINC00871-203ENST00000556869 BCORQ6W2J9 1755 aa-0.71□□□□□ -2.52
LINC00871-203ENST00000556869 KIF20BQ96Q89 1820 aa-0.71□□□□□ -2.52
LINC00871-203ENST00000556869 RAPGEF2Q9Y4G8 1499 aa-0.72□□□□□ -2.52
LINC00871-203ENST00000556869 NF1P21359 2839 aa-0.72□□□□□ -2.52
LINC00871-203ENST00000556869 ABCC2Q92887 1545 aa-0.72□□□□□ -2.52
LINC00871-203ENST00000556869 TMEM218A2RU14 115 aa-0.72□□□□□ -2.52
LINC00871-203ENST00000556869 PSENENQ9NZ42 101 aa-0.72□□□□□ -2.52
LINC00871-203ENST00000556869 AP4S1Q9Y587 144 aa-0.72□□□□□ -2.52
LINC00871-203ENST00000556869 SPG11Q96JI7 2443 aa-0.72□□□□□ -2.52
LINC00871-203ENST00000556869 ADAMTS12P58397 1594 aa-0.72□□□□□ -2.52
LINC00871-203ENST00000556869 PTPN23Q9H3S7 1636 aa-0.72□□□□□ -2.52
LINC00871-203ENST00000556869 SONP18583 2426 aaKnown RBP-0.73□□□□□ -2.53
LINC00871-203ENST00000556869 SAMD9Q5K651 1589 aa-0.73□□□□□ -2.53
LINC00871-203ENST00000556869 H7BZZ5 65 aa-0.73□□□□□ -2.53
LINC00871-203ENST00000556869 MPC2O95563 127 aa-0.73□□□□□ -2.53
LINC00871-203ENST00000556869 SARNPP82979 210 aaKnown RBP-0.73□□□□□ -2.53
LINC00871-203ENST00000556869 FAT1Q14517 4588 aa-0.73□□□□□ -2.53
LINC00871-203ENST00000556869 MXRA5Q9NR99 2828 aa-0.73□□□□□ -2.53
LINC00871-203ENST00000556869 RGPD2P0DJD1 1756 aa-0.73□□□□□ -2.53
LINC00871-203ENST00000556869 PRDM15P57071 1507 aaPredicted RBP-0.74□□□□□ -2.53
LINC00871-203ENST00000556869 ZFYVE16Q7Z3T8 1539 aa-0.74□□□□□ -2.53
LINC00871-203ENST00000556869 EPG5Q9HCE0 2579 aa-0.75□□□□□ -2.53
LINC00871-203ENST00000556869 TGP01266 2768 aa-0.75□□□□□ -2.53
LINC00871-203ENST00000556869 ATOX1O00244 68 aa-0.75□□□□□ -2.53
LINC00871-203ENST00000556869 MT4P47944 62 aa-0.75□□□□□ -2.53
LINC00871-203ENST00000556869 ETDBQ3ZM63 59 aa-0.75□□□□□ -2.53
LINC00871-203ENST00000556869 SERP2Q8N6R1 65 aa-0.75□□□□□ -2.53
LINC00871-203ENST00000556869 ANKRD36BQ8N2N9 1353 aa-0.75□□□□□ -2.53
LINC00871-203ENST00000556869 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.75□□□□□ -2.53
LINC00871-203ENST00000556869 CICQ96RK0 1608 aaPredicted RBP-0.75□□□□□ -2.53
LINC00871-203ENST00000556869 HERC2O95714 4834 aa-0.76□□□□□ -2.53
LINC00871-203ENST00000556869 D6R8Y8 96 aa-0.76□□□□□ -2.53
LINC00871-203ENST00000556869 LEPROTL1O95214 131 aa-0.76□□□□□ -2.53
LINC00871-203ENST00000556869 MT-ATP8P03928 68 aa-0.76□□□□□ -2.53
LINC00871-203ENST00000556869 IGLC2P0DOY2 106 aa-0.76□□□□□ -2.53
LINC00871-203ENST00000556869 IGLC3P0DOY3 106 aa-0.76□□□□□ -2.53
LINC00871-203ENST00000556869 ZNF720Q7Z2F6 126 aa-0.76□□□□□ -2.53
LINC00871-203ENST00000556869 MUSTN1Q8IVN3 82 aa-0.76□□□□□ -2.53
LINC00871-203ENST00000556869 NRXN1Q9ULB1 1477 aa-0.76□□□□□ -2.53
LINC00871-203ENST00000556869 PDE4DIPQ5VU43 2346 aa-0.76□□□□□ -2.53
LINC00871-203ENST00000556869 PKD1L3Q7Z443 1732 aa-0.77□□□□□ -2.53
LINC00871-203ENST00000556869 CRYBG1Q9Y4K1 1723 aa-0.77□□□□□ -2.53
LINC00871-203ENST00000556869 S100A10P60903 97 aa-0.77□□□□□ -2.53
LINC00871-203ENST00000556869 HMGN3Q15651 99 aa-0.77□□□□□ -2.53
LINC00871-203ENST00000556869 NMSQ5H8A3 153 aa-0.77□□□□□ -2.53
LINC00871-203ENST00000556869 COL5A1-AS1Q5SY13 56 aa-0.77□□□□□ -2.53
LINC00871-203ENST00000556869 ALKAL2Q6UX46 152 aa-0.77□□□□□ -2.53
LINC00871-203ENST00000556869 TROQ12816 1431 aaPredicted RBP-0.78□□□□□ -2.53
LINC00871-203ENST00000556869 UQCRHLA0A096LP55 91 aa-0.78□□□□□ -2.53
LINC00871-203ENST00000556869 SPRR2FQ96RM1 72 aa-0.78□□□□□ -2.53
LINC00871-203ENST00000556869 UBR3Q6ZT12 1888 aa-0.78□□□□□ -2.53
LINC00871-203ENST00000556869 QSER1Q2KHR3 1735 aa-0.78□□□□□ -2.53
LINC00871-203ENST00000556869 CLTCQ00610 1675 aaKnown RBP-0.78□□□□□ -2.53
LINC00871-203ENST00000556869 PREX1Q8TCU6 1659 aa-0.78□□□□□ -2.53
LINC00871-203ENST00000556869 RYR3Q15413 4870 aa-0.78□□□□□ -2.54
LINC00871-203ENST00000556869 FYCO1Q9BQS8 1478 aa-0.79□□□□□ -2.54
LINC00871-203ENST00000556869 F8WEM9 126 aa-0.79□□□□□ -2.54
LINC00871-203ENST00000556869 FAUP35544 74 aaKnown RBP-0.79□□□□□ -2.54
LINC00871-203ENST00000556869 UBR4Q5T4S7 5183 aa-0.79□□□□□ -2.54
LINC00871-203ENST00000556869 H3BNG1 76 aa-0.8□□□□□ -2.54
LINC00871-203ENST00000556869 LINC00032P0C843 101 aa-0.8□□□□□ -2.54
LINC00871-203ENST00000556869 MAGI2Q86UL8 1455 aa-0.8□□□□□ -2.54
LINC00871-203ENST00000556869 STARD9Q9P2P6 4700 aa-0.8□□□□□ -2.54
LINC00871-203ENST00000556869 COX7BP24311 80 aa-0.81□□□□□ -2.54
LINC00871-203ENST00000556869 RPL38P63173 70 aaKnown RBP-0.81□□□□□ -2.54
LINC00871-203ENST00000556869 TCEAL7Q9BRU2 100 aa-0.81□□□□□ -2.54
LINC00871-203ENST00000556869 UBE2D4Q9Y2X8 147 aa-0.81□□□□□ -2.54
LINC00871-203ENST00000556869 C4AP0C0L4 1744 aa-0.81□□□□□ -2.54
LINC00871-203ENST00000556869 C4BP0C0L5 1744 aa-0.81□□□□□ -2.54
LINC00871-203ENST00000556869 PKD1P98161 4303 aa-0.81□□□□□ -2.54
LINC00871-203ENST00000556869 USH2AO75445 5202 aa-0.82□□□□□ -2.54
LINC00871-203ENST00000556869 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.82□□□□□ -2.54
LINC00871-203ENST00000556869 DNAH6Q9C0G6 4158 aa-0.82□□□□□ -2.54
LINC00871-203ENST00000556869 NDUFA3O95167 84 aa-0.82□□□□□ -2.54
LINC00871-203ENST00000556869 S100PP25815 95 aa-0.82□□□□□ -2.54
LINC00871-203ENST00000556869 LRRC9Q6ZRR7 1453 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms