RNA–Protein interactions for RNA: ENST00000553993.1

TRAV32-201, Transcript of T cell receptor alpha variable 32 (pseudogene), humanhuman

BASIC

Gene TRAV32, Length 340 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV32-201ENST00000553993 TNXBP22105 4242 aa0.11□□□□□ -2.39
TRAV32-201ENST00000553993 ABCC3O15438 1527 aa0.1□□□□□ -2.39
TRAV32-201ENST00000553993 SPINK1P00995 79 aa0.1□□□□□ -2.39
TRAV32-201ENST00000553993 S100A3P33764 101 aa0.1□□□□□ -2.39
TRAV32-201ENST00000553993 ZNF720Q7Z2F6 126 aa0.1□□□□□ -2.39
TRAV32-201ENST00000553993 UBE2D4Q9Y2X8 147 aa0.1□□□□□ -2.39
TRAV32-201ENST00000553993 U3KQA8 63 aa0.1□□□□□ -2.39
TRAV32-201ENST00000553993 PTPRZ1P23471 2315 aaPredicted RBP0.1□□□□□ -2.39
TRAV32-201ENST00000553993 LRRC37AA6NMS7 1700 aa0.1□□□□□ -2.39
TRAV32-201ENST00000553993 C4AP0C0L4 1744 aa0.1□□□□□ -2.39
TRAV32-201ENST00000553993 C4BP0C0L5 1744 aa0.1□□□□□ -2.39
TRAV32-201ENST00000553993 ARFGEF2Q9Y6D5 1785 aa0.09□□□□□ -2.39
TRAV32-201ENST00000553993 ANKRD17O75179 2603 aaKnown RBP0.09□□□□□ -2.39
TRAV32-201ENST00000553993 PIEZO2Q9H5I5 2752 aa0.09□□□□□ -2.39
TRAV32-201ENST00000553993 SPTBN2O15020 2390 aa0.09□□□□□ -2.39
TRAV32-201ENST00000553993 HMGN2P05204 90 aaKnown RBP0.09□□□□□ -2.4
TRAV32-201ENST00000553993 COX6B1P14854 86 aa0.09□□□□□ -2.4
TRAV32-201ENST00000553993 Q5VSD8 79 aa0.09□□□□□ -2.4
TRAV32-201ENST00000553993 FXYD6Q9H0Q3 95 aa0.09□□□□□ -2.4
TRAV32-201ENST00000553993 NKTRP30414 1462 aaKnown RBP0.09□□□□□ -2.4
TRAV32-201ENST00000553993 MAP3K4Q9Y6R4 1608 aa0.09□□□□□ -2.4
TRAV32-201ENST00000553993 LRRC7Q96NW7 1537 aa0.08□□□□□ -2.4
TRAV32-201ENST00000553993 TIAM2Q8IVF5 1701 aa0.08□□□□□ -2.4
TRAV32-201ENST00000553993 BSNQ9UPA5 3926 aa0.08□□□□□ -2.4
TRAV32-201ENST00000553993 RB1CC1Q8TDY2 1594 aa0.08□□□□□ -2.4
TRAV32-201ENST00000553993 CPSF4LA6NMK7 179 aaKnown RBP0.08□□□□□ -2.4
TRAV32-201ENST00000553993 PEA15Q15121 130 aa0.08□□□□□ -2.4
TRAV32-201ENST00000553993 H1FX-AS1Q4G0G2 97 aa0.08□□□□□ -2.4
TRAV32-201ENST00000553993 DEFB105AQ8NG35 78 aa0.08□□□□□ -2.4
TRAV32-201ENST00000553993 USP32Q8NFA0 1604 aa0.08□□□□□ -2.4
TRAV32-201ENST00000553993 PKDREJQ9NTG1 2253 aa0.08□□□□□ -2.4
TRAV32-201ENST00000553993 PKD1L1Q8TDX9 2849 aa0.08□□□□□ -2.4
TRAV32-201ENST00000553993 ABCC2Q92887 1545 aa0.08□□□□□ -2.4
TRAV32-201ENST00000553993 SETBP1Q9Y6X0 1596 aa0.07□□□□□ -2.4
TRAV32-201ENST00000553993 CSPG4Q6UVK1 2322 aa0.07□□□□□ -2.4
TRAV32-201ENST00000553993 PVALEFA0A1B0GWK0 134 aa0.07□□□□□ -2.4
TRAV32-201ENST00000553993 PLCH1Q4KWH8 1693 aa0.07□□□□□ -2.4
TRAV32-201ENST00000553993 HMCN2Q8NDA2 5059 aa0.07□□□□□ -2.4
TRAV32-201ENST00000553993 PLIN4Q96Q06 1357 aa0.06□□□□□ -2.4
TRAV32-201ENST00000553993 PIK3C2BO00750 1634 aa0.06□□□□□ -2.4
TRAV32-201ENST00000553993 UBR5O95071 2799 aaPredicted RBP0.06□□□□□ -2.4
TRAV32-201ENST00000553993 TENM4Q6N022 2769 aa0.06□□□□□ -2.4
TRAV32-201ENST00000553993 TJP1Q07157 1748 aa0.06□□□□□ -2.4
TRAV32-201ENST00000553993 IGSF10Q6WRI0 2623 aa0.06□□□□□ -2.4
TRAV32-201ENST00000553993 UNC79Q9P2D8 2635 aa0.06□□□□□ -2.4
TRAV32-201ENST00000553993 RGPD8O14715 1765 aaPredicted RBP0.06□□□□□ -2.4
TRAV32-201ENST00000553993 RGPD5Q99666 1765 aa0.06□□□□□ -2.4
TRAV32-201ENST00000553993 CEP170BQ9Y4F5 1589 aaPredicted RBP0.06□□□□□ -2.4
TRAV32-201ENST00000553993 ATP7BP35670 1465 aa0.05□□□□□ -2.4
TRAV32-201ENST00000553993 RICTORQ6R327 1708 aa0.05□□□□□ -2.4
TRAV32-201ENST00000553993 TRAV21A0A0B4J279 112 aa0.05□□□□□ -2.4
TRAV32-201ENST00000553993 MYMXA0A1B0GTQ4 84 aa0.05□□□□□ -2.4
TRAV32-201ENST00000553993 HMGN3Q15651 99 aa0.05□□□□□ -2.4
TRAV32-201ENST00000553993 MRPL34Q9BQ48 92 aaKnown RBP0.05□□□□□ -2.4
TRAV32-201ENST00000553993 CHD6Q8TD26 2715 aa0.05□□□□□ -2.4
TRAV32-201ENST00000553993 PREX1Q8TCU6 1659 aa0.05□□□□□ -2.4
TRAV32-201ENST00000553993 TNRC6CQ9HCJ0 1690 aaKnown RBP0.05□□□□□ -2.4
TRAV32-201ENST00000553993 ERVK-7P63135 1459 aa0.04□□□□□ -2.4
TRAV32-201ENST00000553993 MAGI2Q86UL8 1455 aa0.04□□□□□ -2.4
TRAV32-201ENST00000553993 GVINP1Q7Z2Y8 2422 aa0.04□□□□□ -2.4
TRAV32-201ENST00000553993 NCOR2Q9Y618 2525 aa0.04□□□□□ -2.4
TRAV32-201ENST00000553993 SNRPFP62306 86 aaKnown RBP0.04□□□□□ -2.4
TRAV32-201ENST00000553993 AKAP6Q13023 2319 aa0.04□□□□□ -2.4
TRAV32-201ENST00000553993 FAT2Q9NYQ8 4349 aa0.04□□□□□ -2.4
TRAV32-201ENST00000553993 SPTBN1Q01082 2364 aaKnown RBP0.04□□□□□ -2.4
TRAV32-201ENST00000553993 PARP4Q9UKK3 1724 aaKnown RBP0.04□□□□□ -2.4
TRAV32-201ENST00000553993 NCOA2Q15596 1464 aa0.03□□□□□ -2.4
TRAV32-201ENST00000553993 ARHGAP35Q9NRY4 1499 aa0.03□□□□□ -2.4
TRAV32-201ENST00000553993 CFAP43Q8NDM7 1665 aa0.03□□□□□ -2.4
TRAV32-201ENST00000553993 H3BUT2 72 aa0.03□□□□□ -2.4
TRAV32-201ENST00000553993 COX7BP24311 80 aa0.03□□□□□ -2.4
TRAV32-201ENST00000553993 PLGLAQ15195 96 aa0.03□□□□□ -2.4
TRAV32-201ENST00000553993 LINC00643Q86TS7 51 aa0.03□□□□□ -2.4
TRAV32-201ENST00000553993 MYO5CQ9NQX4 1742 aa0.03□□□□□ -2.4
TRAV32-201ENST00000553993 NESP48681 1621 aa0.02□□□□□ -2.41
TRAV32-201ENST00000553993 IQGAP3Q86VI3 1631 aa0.02□□□□□ -2.41
TRAV32-201ENST00000553993 DDX60LQ5H9U9 1706 aaKnown RBP0.02□□□□□ -2.41
TRAV32-201ENST00000553993 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.02□□□□□ -2.41
TRAV32-201ENST00000553993 SPTY2D1-AS1A0A0U1RR47 76 aa0.02□□□□□ -2.41
TRAV32-201ENST00000553993 A0A1B0GUT8 65 aa0.02□□□□□ -2.41
TRAV32-201ENST00000553993 CEBPZOSA8MTT3 80 aa0.02□□□□□ -2.41
TRAV32-201ENST00000553993 I3L3M4 83 aa0.02□□□□□ -2.41
TRAV32-201ENST00000553993 SMIM11AP58511 58 aa0.02□□□□□ -2.41
TRAV32-201ENST00000553993 GAFA1Q96PS6 74 aa0.02□□□□□ -2.41
TRAV32-201ENST00000553993 ST20Q9HBF5 79 aa0.02□□□□□ -2.41
TRAV32-201ENST00000553993 UACAQ9BZF9 1416 aa0.02□□□□□ -2.41
TRAV32-201ENST00000553993 HIVEP3Q5T1R4 2406 aa0.02□□□□□ -2.41
TRAV32-201ENST00000553993 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
TRAV32-201ENST00000553993 ITSN1Q15811 1721 aa0.01□□□□□ -2.41
TRAV32-201ENST00000553993 NDUFA3O95167 84 aa0.01□□□□□ -2.41
TRAV32-201ENST00000553993 IFI6P09912 130 aa0.01□□□□□ -2.41
TRAV32-201ENST00000553993 BVES-AS1Q5T3Y7 98 aa0.01□□□□□ -2.41
TRAV32-201ENST00000553993 WFDC9Q8NEX5 89 aa0.01□□□□□ -2.41
TRAV32-201ENST00000553993 USMG5Q96IX5 58 aa0.01□□□□□ -2.41
TRAV32-201ENST00000553993 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
TRAV32-201ENST00000553993 COL7A1Q02388 2944 aa0.01□□□□□ -2.41
TRAV32-201ENST00000553993 CCDC18Q5T9S5 1454 aa0.01□□□□□ -2.41
TRAV32-201ENST00000553993 DCAF1Q9Y4B6 1507 aa0.01□□□□□ -2.41
TRAV32-201ENST00000553993 GPR98Q8WXG9 6306 aa0.01□□□□□ -2.41
TRAV32-201ENST00000553993 NRAPQ86VF7 1730 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms