RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 UBE2L3P68036 154 aaKnown RBP1.29□□□□□ -2.2
HIPK3-206ENST00000534262 SSBP1Q04837 148 aaKnown RBP1.29□□□□□ -2.2
HIPK3-206ENST00000534262 NCMAPQ5T1S8 102 aa1.29□□□□□ -2.2
HIPK3-206ENST00000534262 Q6ZSA8 131 aa1.29□□□□□ -2.2
HIPK3-206ENST00000534262 SVBPQ8N300 66 aa1.29□□□□□ -2.2
HIPK3-206ENST00000534262 COX7B2Q8TF08 81 aa1.29□□□□□ -2.2
HIPK3-206ENST00000534262 JMJD1CQ15652 2540 aa1.29□□□□□ -2.2
HIPK3-206ENST00000534262 CENPEQ02224 2701 aa1.28□□□□□ -2.2
HIPK3-206ENST00000534262 TRBV7-1A0A0A6YYK4 115 aa1.28□□□□□ -2.2
HIPK3-206ENST00000534262 M0R143 59 aa1.28□□□□□ -2.2
HIPK3-206ENST00000534262 CYP4F30PQ9H0H9 118 aa1.28□□□□□ -2.2
HIPK3-206ENST00000534262 LINC00312Q9Y6C7 94 aa1.28□□□□□ -2.2
HIPK3-206ENST00000534262 TCHHQ07283 1943 aa1.28□□□□□ -2.2
HIPK3-206ENST00000534262 NOTCH1P46531 2555 aa1.28□□□□□ -2.2
HIPK3-206ENST00000534262 SMG1Q96Q15 3661 aaKnown RBP1.28□□□□□ -2.21
HIPK3-206ENST00000534262 APCP25054 2843 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 STAB1Q9NY15 2570 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 CNTRLQ7Z7A1 2325 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 MED12Q93074 2177 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 PIGBOS1A0A0B4J2F0 54 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 FAM24AA6NFZ4 105 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 H0YGG7 62 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 K7EIL1 84 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 ANGP03950 147 aaKnown RBP1.27□□□□□ -2.21
HIPK3-206ENST00000534262 ATP5EP56381 51 aaPredicted RBP1.27□□□□□ -2.21
HIPK3-206ENST00000534262 DEFB121Q5J5C9 76 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 SNHG12Q9BXW3 62 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 BET1LQ9NYM9 111 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 ZFHX3Q15911 3703 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 OTOGQ6ZRI0 2925 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 NF1P21359 2839 aa1.27□□□□□ -2.21
HIPK3-206ENST00000534262 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.27□□□□□ -2.21
HIPK3-206ENST00000534262 MGAQ8IWI9 3026 aa1.26□□□□□ -2.21
HIPK3-206ENST00000534262 TRBV30A0A0K0K1B3 111 aa1.26□□□□□ -2.21
HIPK3-206ENST00000534262 LOC285095A0A1B0GVY8 99 aa1.26□□□□□ -2.21
HIPK3-206ENST00000534262 DEFB108AA8MXU0 73 aa1.26□□□□□ -2.21
HIPK3-206ENST00000534262 SNRNP200O75643 2136 aaKnown RBP1.26□□□□□ -2.21
HIPK3-206ENST00000534262 PKIAP61925 76 aa1.26□□□□□ -2.21
HIPK3-206ENST00000534262 UBA52P62987 128 aaKnown RBP1.26□□□□□ -2.21
HIPK3-206ENST00000534262 Q96NJ1 140 aa1.26□□□□□ -2.21
HIPK3-206ENST00000534262 CRCT1Q9UGL9 99 aa1.26□□□□□ -2.21
HIPK3-206ENST00000534262 LAMA5O15230 3695 aa1.26□□□□□ -2.21
HIPK3-206ENST00000534262 FREM2Q5SZK8 3169 aa1.25□□□□□ -2.21
HIPK3-206ENST00000534262 COL12A1Q99715 3063 aa1.25□□□□□ -2.21
HIPK3-206ENST00000534262 CELSR2Q9HCU4 2923 aa1.25□□□□□ -2.21
HIPK3-206ENST00000534262 PDZD2O15018 2839 aa1.25□□□□□ -2.21
HIPK3-206ENST00000534262 EDDM3BP56851 147 aa1.25□□□□□ -2.21
HIPK3-206ENST00000534262 DYNLRB1Q9NP97 96 aa1.25□□□□□ -2.21
HIPK3-206ENST00000534262 TMEM14BQ9NUH8 114 aa1.25□□□□□ -2.21
HIPK3-206ENST00000534262 TLN2Q9Y4G6 2542 aa1.25□□□□□ -2.21
HIPK3-206ENST00000534262 LRBAP50851 2863 aa1.25□□□□□ -2.21
HIPK3-206ENST00000534262 SONP18583 2426 aaKnown RBP1.25□□□□□ -2.21
HIPK3-206ENST00000534262 CADP27708 2225 aa1.24□□□□□ -2.21
HIPK3-206ENST00000534262 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.24□□□□□ -2.21
HIPK3-206ENST00000534262 MRPL33O75394 65 aaKnown RBP1.24□□□□□ -2.21
HIPK3-206ENST00000534262 DEFB110Q30KQ9 67 aa1.24□□□□□ -2.21
HIPK3-206ENST00000534262 Q8N6K4 173 aa1.24□□□□□ -2.21
HIPK3-206ENST00000534262 WFDC9Q8NEX5 89 aa1.24□□□□□ -2.21
HIPK3-206ENST00000534262 PLAC4Q8WY50 150 aa1.24□□□□□ -2.21
HIPK3-206ENST00000534262 ACANP16112 2415 aa1.24□□□□□ -2.21
HIPK3-206ENST00000534262 TRBV7-3A0A075B6L6 115 aa1.23□□□□□ -2.21
HIPK3-206ENST00000534262 LCE6AA0A183 80 aa1.23□□□□□ -2.21
HIPK3-206ENST00000534262 IFI6P09912 130 aa1.23□□□□□ -2.21
HIPK3-206ENST00000534262 Q86TA4 180 aa1.23□□□□□ -2.21
HIPK3-206ENST00000534262 PPP1R1CQ8WVI7 109 aa1.23□□□□□ -2.21
HIPK3-206ENST00000534262 BPESC1Q9GZL8 116 aa1.23□□□□□ -2.21
HIPK3-206ENST00000534262 WDFY3Q8IZQ1 3526 aa1.23□□□□□ -2.21
HIPK3-206ENST00000534262 UTP20O75691 2785 aaKnown RBP1.23□□□□□ -2.21
HIPK3-206ENST00000534262 CACNA1CQ13936 2221 aa1.23□□□□□ -2.21
HIPK3-206ENST00000534262 WNK1Q9H4A3 2382 aa1.22□□□□□ -2.21
HIPK3-206ENST00000534262 ATMQ13315 3056 aa1.22□□□□□ -2.21
HIPK3-206ENST00000534262 NSD1Q96L73 2696 aaPredicted RBP1.22□□□□□ -2.21
HIPK3-206ENST00000534262 NBPF19A0A087WUL8 3843 aa1.22□□□□□ -2.21
HIPK3-206ENST00000534262 A0A1W2PPM0 123 aa1.22□□□□□ -2.21
HIPK3-206ENST00000534262 H3BQF6 201 aa1.22□□□□□ -2.21
HIPK3-206ENST00000534262 MT-ATP8P03928 68 aa1.22□□□□□ -2.21
HIPK3-206ENST00000534262 S100A10P60903 97 aa1.22□□□□□ -2.21
HIPK3-206ENST00000534262 Q5VV11 94 aa1.22□□□□□ -2.21
HIPK3-206ENST00000534262 TSLPQ969D9 159 aa1.22□□□□□ -2.21
HIPK3-206ENST00000534262 WFDC6Q9BQY6 131 aa1.22□□□□□ -2.21
HIPK3-206ENST00000534262 SPTBP11277 2137 aa1.22□□□□□ -2.21
HIPK3-206ENST00000534262 LOC400499M0QZD8 3231 aa1.21□□□□□ -2.22
HIPK3-206ENST00000534262 ABCA1O95477 2261 aa1.21□□□□□ -2.22
HIPK3-206ENST00000534262 FXYD1O00168 92 aa1.21□□□□□ -2.22
HIPK3-206ENST00000534262 RPL37P61927 97 aaKnown RBP1.21□□□□□ -2.22
HIPK3-206ENST00000534262 C10orf128Q5T292 105 aa1.21□□□□□ -2.22
HIPK3-206ENST00000534262 NCBP2-AS2Q69YL0 99 aa1.21□□□□□ -2.22
HIPK3-206ENST00000534262 MXRA5Q9NR99 2828 aa1.21□□□□□ -2.22
HIPK3-206ENST00000534262 FLNAP21333 2647 aaKnown RBP1.21□□□□□ -2.22
HIPK3-206ENST00000534262 LAMA1P25391 3075 aa1.21□□□□□ -2.22
HIPK3-206ENST00000534262 ADGRG4Q8IZF6 3080 aa1.21□□□□□ -2.22
HIPK3-206ENST00000534262 ROS1P08922 2347 aa1.21□□□□□ -2.22
HIPK3-206ENST00000534262 CRYBG3Q68DQ2 2970 aa1.2□□□□□ -2.22
HIPK3-206ENST00000534262 CELSR3Q9NYQ7 3312 aa1.2□□□□□ -2.22
HIPK3-206ENST00000534262 USF3Q68DE3 2245 aa1.2□□□□□ -2.22
HIPK3-206ENST00000534262 PKD1L1Q8TDX9 2849 aa1.2□□□□□ -2.22
HIPK3-206ENST00000534262 CCL18P55774 89 aa1.2□□□□□ -2.22
HIPK3-206ENST00000534262 COL5A1-AS1Q5SY13 56 aa1.2□□□□□ -2.22
HIPK3-206ENST00000534262 FAM167A-AS1Q96KT0 104 aa1.2□□□□□ -2.22
HIPK3-206ENST00000534262 NDUFA4L2Q9NRX3 87 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms