RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 AEBP2Q6ZN18 517 aaPredicted RBP19.39■□□□□ 0.69
HIPK3-206ENST00000534262 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
HIPK3-206ENST00000534262 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
HIPK3-206ENST00000534262 SENP3Q9H4L4 574 aaPredicted RBP16.4■□□□□ 0.22
HIPK3-206ENST00000534262 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
HIPK3-206ENST00000534262 FOXD1Q16676 465 aa15.25■□□□□ 0.03
HIPK3-206ENST00000534262 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
HIPK3-206ENST00000534262 ADRA2BP18089 450 aa14.68□□□□□ -0.06
HIPK3-206ENST00000534262 PIAS4Q8N2W9 510 aaPredicted RBP14.33□□□□□ -0.12
HIPK3-206ENST00000534262 MSH5O43196 834 aa14.01□□□□□ -0.17
HIPK3-206ENST00000534262 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
HIPK3-206ENST00000534262 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
HIPK3-206ENST00000534262 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
HIPK3-206ENST00000534262 KCNA4P22459 653 aa13.28□□□□□ -0.28
HIPK3-206ENST00000534262 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
HIPK3-206ENST00000534262 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
HIPK3-206ENST00000534262 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
HIPK3-206ENST00000534262 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
HIPK3-206ENST00000534262 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
HIPK3-206ENST00000534262 HOXD11P31277 338 aaPredicted RBP12.88□□□□□ -0.35
HIPK3-206ENST00000534262 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
HIPK3-206ENST00000534262 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
HIPK3-206ENST00000534262 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
HIPK3-206ENST00000534262 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
HIPK3-206ENST00000534262 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
HIPK3-206ENST00000534262 EHMT2Q96KQ7 1210 aa12.25□□□□□ -0.45
HIPK3-206ENST00000534262 ZBTB22O15209 634 aa12.23□□□□□ -0.45
HIPK3-206ENST00000534262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.45
HIPK3-206ENST00000534262 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
HIPK3-206ENST00000534262 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
HIPK3-206ENST00000534262 U3KPZ7 1027 aaPredicted RBP12.05□□□□□ -0.48
HIPK3-206ENST00000534262 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
HIPK3-206ENST00000534262 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
HIPK3-206ENST00000534262 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
HIPK3-206ENST00000534262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.87□□□□□ -0.51
HIPK3-206ENST00000534262 HNRNPUL2Q1KMD3 747 aaKnown RBP11.87□□□□□ -0.51
HIPK3-206ENST00000534262 SAMD1Q6SPF0 538 aaPredicted RBP11.84□□□□□ -0.51
HIPK3-206ENST00000534262 ATXN8OSP0DMR3 200 aa11.8□□□□□ -0.52
HIPK3-206ENST00000534262 APLP2Q06481 763 aa11.72□□□□□ -0.53
HIPK3-206ENST00000534262 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
HIPK3-206ENST00000534262 SPINK5Q9NQ38 1064 aaPredicted RBP11.7□□□□□ -0.54
HIPK3-206ENST00000534262 CACNB1Q02641 598 aaPredicted RBP11.66□□□□□ -0.54
HIPK3-206ENST00000534262 CAPN15O75808 1086 aa11.61□□□□□ -0.55
HIPK3-206ENST00000534262 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
HIPK3-206ENST00000534262 ZNF219Q9P2Y4 722 aaPredicted RBP11.57□□□□□ -0.56
HIPK3-206ENST00000534262 DSG3P32926 999 aa11.47□□□□□ -0.57
HIPK3-206ENST00000534262 POLA2Q14181 598 aa11.43□□□□□ -0.58
HIPK3-206ENST00000534262 ABCB7O75027 752 aa11.4□□□□□ -0.58
HIPK3-206ENST00000534262 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
HIPK3-206ENST00000534262 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
HIPK3-206ENST00000534262 FBLN2P98095 1184 aa11.16□□□□□ -0.62
HIPK3-206ENST00000534262 OSCARQ8IYS5 282 aa11□□□□□ -0.65
HIPK3-206ENST00000534262 FKBP8Q14318 412 aa10.96□□□□□ -0.65
HIPK3-206ENST00000534262 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
HIPK3-206ENST00000534262 SPDYE4A6NLX3 237 aa10.94□□□□□ -0.66
HIPK3-206ENST00000534262 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
HIPK3-206ENST00000534262 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
HIPK3-206ENST00000534262 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
HIPK3-206ENST00000534262 RBM42Q9BTD8 480 aaKnown RBP10.88□□□□□ -0.67
HIPK3-206ENST00000534262 SSUH2Q9Y2M2 353 aa10.87□□□□□ -0.67
HIPK3-206ENST00000534262 PROM2Q8N271 834 aa10.83□□□□□ -0.68
HIPK3-206ENST00000534262 AKT1S1Q96B36 256 aa10.79□□□□□ -0.68
HIPK3-206ENST00000534262 PABPN1Q86U42 306 aaKnown RBP eCLIP10.74□□□□□ -0.69
HIPK3-206ENST00000534262 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
HIPK3-206ENST00000534262 SPDYE1Q8NFV5 336 aaPredicted RBP10.58□□□□□ -0.72
HIPK3-206ENST00000534262 STAG3Q9UJ98 1225 aa10.57□□□□□ -0.72
HIPK3-206ENST00000534262 FBXO3Q9UK99 471 aa10.57□□□□□ -0.72
HIPK3-206ENST00000534262 PITPNM1O00562 1244 aa10.55□□□□□ -0.72
HIPK3-206ENST00000534262 CLEC11AQ9Y240 323 aa10.52□□□□□ -0.73
HIPK3-206ENST00000534262 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
HIPK3-206ENST00000534262 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
HIPK3-206ENST00000534262 CHRDL2Q6WN34 429 aa10.43□□□□□ -0.74
HIPK3-206ENST00000534262 FXR2P51116 673 aaKnown RBP eCLIP10.38□□□□□ -0.75
HIPK3-206ENST00000534262 MIER1Q8N108 512 aa10.37□□□□□ -0.75
HIPK3-206ENST00000534262 CREBZFQ9NS37 354 aa10.35□□□□□ -0.75
HIPK3-206ENST00000534262 IFNLR1Q8IU57 520 aaPredicted RBP10.33□□□□□ -0.76
HIPK3-206ENST00000534262 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
HIPK3-206ENST00000534262 PIP4P2Q8N4L2 257 aa10.32□□□□□ -0.76
HIPK3-206ENST00000534262 MNX1P50219 401 aaPredicted RBP10.28□□□□□ -0.76
HIPK3-206ENST00000534262 CHADLQ6NUI6 762 aa10.28□□□□□ -0.76
HIPK3-206ENST00000534262 PRKAR2AP13861 404 aaKnown RBP10.27□□□□□ -0.77
HIPK3-206ENST00000534262 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
HIPK3-206ENST00000534262 KLHL34Q8N239 644 aa10.22□□□□□ -0.77
HIPK3-206ENST00000534262 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
HIPK3-206ENST00000534262 FARP1Q9Y4F1 1045 aaPredicted RBP10.2□□□□□ -0.78
HIPK3-206ENST00000534262 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
HIPK3-206ENST00000534262 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
HIPK3-206ENST00000534262 NUBP1P53384 320 aa10.14□□□□□ -0.79
HIPK3-206ENST00000534262 POTEHQ6S545 545 aa10.08□□□□□ -0.8
HIPK3-206ENST00000534262 RASEFQ8IZ41 740 aa10.07□□□□□ -0.8
HIPK3-206ENST00000534262 AMER1Q5JTC6 1135 aaPredicted RBP10.03□□□□□ -0.8
HIPK3-206ENST00000534262 C19orf67A6NJJ6 358 aa10.02□□□□□ -0.81
HIPK3-206ENST00000534262 RTN4Q9NQC3 1192 aaKnown RBP10.02□□□□□ -0.81
HIPK3-206ENST00000534262 PKD2Q13563 968 aa10□□□□□ -0.81
HIPK3-206ENST00000534262 DCAF8Q5TAQ9 597 aa10□□□□□ -0.81
HIPK3-206ENST00000534262 GSE1Q14687 1217 aa9.99□□□□□ -0.81
HIPK3-206ENST00000534262 FAM212AQ96EL1 285 aa9.99□□□□□ -0.81
HIPK3-206ENST00000534262 CIZ1Q9ULV3 898 aaPredicted RBP9.98□□□□□ -0.81
HIPK3-206ENST00000534262 CD44P16070 742 aaKnown RBP9.97□□□□□ -0.81
HIPK3-206ENST00000534262 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms