RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 SCGB1C1Q8TD33 95 aa3.36□□□□□ -1.87
SVIP-204ENST00000530199 TP73-AS1Q9UF72 201 aa3.36□□□□□ -1.87
SVIP-204ENST00000530199 TGIF2-C20orf24A0A0A6YYL0 155 aa3.35□□□□□ -1.87
SVIP-204ENST00000530199 SLC25A20O43772 301 aa3.35□□□□□ -1.87
SVIP-204ENST00000530199 SH2D1AO60880 128 aa3.35□□□□□ -1.87
SVIP-204ENST00000530199 SMIM17P0DL12 118 aa3.35□□□□□ -1.87
SVIP-204ENST00000530199 AQP4P55087 323 aa3.35□□□□□ -1.87
SVIP-204ENST00000530199 C1orf195Q5TG92 126 aa3.35□□□□□ -1.87
SVIP-204ENST00000530199 RASL11AQ6T310 242 aa3.35□□□□□ -1.87
SVIP-204ENST00000530199 NIT2Q9NQR4 276 aa3.35□□□□□ -1.87
SVIP-204ENST00000530199 LSM5Q9Y4Y9 91 aaKnown RBP3.35□□□□□ -1.87
SVIP-204ENST00000530199 ARL2-SNX15V9GYD0 113 aa3.35□□□□□ -1.87
SVIP-204ENST00000530199 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.34□□□□□ -1.87
SVIP-204ENST00000530199 IGKV2-29A2NJV5 120 aaPredicted RBP3.34□□□□□ -1.87
SVIP-204ENST00000530199 C1orf196B1AJZ1 125 aa3.34□□□□□ -1.87
SVIP-204ENST00000530199 NCR2O95944 276 aa3.34□□□□□ -1.87
SVIP-204ENST00000530199 CXCL1P09341 107 aa3.34□□□□□ -1.87
SVIP-204ENST00000530199 LGALS3P17931 250 aaKnown RBP3.34□□□□□ -1.87
SVIP-204ENST00000530199 TMEM136Q6ZRR5 245 aa3.34□□□□□ -1.87
SVIP-204ENST00000530199 BTF3L4Q96K17 158 aa3.34□□□□□ -1.87
SVIP-204ENST00000530199 AP1S3Q96PC3 154 aa3.34□□□□□ -1.87
SVIP-204ENST00000530199 EPDR1Q9UM22 224 aa3.34□□□□□ -1.87
SVIP-204ENST00000530199 TMSB15BA0A087X1C1 80 aa3.33□□□□□ -1.88
SVIP-204ENST00000530199 C9orf170A2RU37 121 aa3.33□□□□□ -1.88
SVIP-204ENST00000530199 SPANXN1Q5VSR9 72 aa3.33□□□□□ -1.88
SVIP-204ENST00000530199 UNQ6190/PRO20217Q6UXQ8 127 aa3.33□□□□□ -1.88
SVIP-204ENST00000530199 PLEKHB2Q96CS7 222 aa3.33□□□□□ -1.88
SVIP-204ENST00000530199 CDC42SE2Q9NRR3 84 aa3.33□□□□□ -1.88
SVIP-204ENST00000530199 IGSF23A1L1A6 192 aa3.32□□□□□ -1.88
SVIP-204ENST00000530199 LINC00614P0C842 121 aa3.32□□□□□ -1.88
SVIP-204ENST00000530199 RAB5BP61020 215 aa3.32□□□□□ -1.88
SVIP-204ENST00000530199 IFITM2Q01629 132 aa3.32□□□□□ -1.88
SVIP-204ENST00000530199 Q6Q795 121 aa3.32□□□□□ -1.88
SVIP-204ENST00000530199 LYZL1Q6UWQ5 148 aa3.32□□□□□ -1.88
SVIP-204ENST00000530199 AMN1Q8IY45 258 aa3.32□□□□□ -1.88
SVIP-204ENST00000530199 WDR61Q9GZS3 305 aaKnown RBP3.32□□□□□ -1.88
SVIP-204ENST00000530199 TRBV30A0A0K0K1B3 111 aa3.31□□□□□ -1.88
SVIP-204ENST00000530199 C17orf112F2Z3M2 114 aa3.31□□□□□ -1.88
SVIP-204ENST00000530199 LSM3P62310 102 aaKnown RBP3.31□□□□□ -1.88
SVIP-204ENST00000530199 C5orf38Q86SI9 138 aa3.31□□□□□ -1.88
SVIP-204ENST00000530199 Q86TA4 180 aa3.31□□□□□ -1.88
SVIP-204ENST00000530199 MCFD2Q8NI22 146 aa3.31□□□□□ -1.88
SVIP-204ENST00000530199 CNBD2Q96M20 576 aa3.31□□□□□ -1.88
SVIP-204ENST00000530199 ZFP30Q9Y2G7 519 aa3.31□□□□□ -1.88
SVIP-204ENST00000530199 C8orf87E5RJ46 101 aa3.3□□□□□ -1.88
SVIP-204ENST00000530199 MGPP08493 103 aa3.3□□□□□ -1.88
SVIP-204ENST00000530199 FAUP35544 74 aaKnown RBP3.3□□□□□ -1.88
SVIP-204ENST00000530199 H2BFSP57053 126 aa3.3□□□□□ -1.88
SVIP-204ENST00000530199 RPS20P60866 119 aaKnown RBP3.3□□□□□ -1.88
SVIP-204ENST00000530199 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
SVIP-204ENST00000530199 IL15RAQ13261 267 aa3.3□□□□□ -1.88
SVIP-204ENST00000530199 C1orf64Q8NEQ6 169 aa3.3□□□□□ -1.88
SVIP-204ENST00000530199 SIGMAR1Q99720 223 aa3.3□□□□□ -1.88
SVIP-204ENST00000530199 MUC21A0A140T8X8 626 aa3.29□□□□□ -1.88
SVIP-204ENST00000530199 K7ERS5 55 aa3.29□□□□□ -1.88
SVIP-204ENST00000530199 SCGB1D4Q6XE38 83 aa3.29□□□□□ -1.88
SVIP-204ENST00000530199 GNB1LQ9BYB4 327 aa3.29□□□□□ -1.88
SVIP-204ENST00000530199 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
SVIP-204ENST00000530199 C9orf92A6NGG3 77 aa3.28□□□□□ -1.88
SVIP-204ENST00000530199 C20orf202A1L168 122 aa3.27□□□□□ -1.89
SVIP-204ENST00000530199 ZNF727A8MUV8 499 aa3.27□□□□□ -1.89
SVIP-204ENST00000530199 TMEM250H0YL14 139 aa3.27□□□□□ -1.89
SVIP-204ENST00000530199 IFNA1P01562 189 aa3.27□□□□□ -1.89
SVIP-204ENST00000530199 NCS1P62166 190 aa3.27□□□□□ -1.89
SVIP-204ENST00000530199 PRLHP81277 87 aa3.27□□□□□ -1.89
SVIP-204ENST00000530199 NEDD8Q15843 81 aa3.27□□□□□ -1.89
SVIP-204ENST00000530199 SPRR4Q96PI1 79 aa3.27□□□□□ -1.89
SVIP-204ENST00000530199 BIN3Q9NQY0 253 aa3.27□□□□□ -1.89
SVIP-204ENST00000530199 TRAPPC1Q9Y5R8 145 aa3.27□□□□□ -1.89
SVIP-204ENST00000530199 TSTD3H0UI37 97 aa3.26□□□□□ -1.89
SVIP-204ENST00000530199 H3BQ85 93 aa3.26□□□□□ -1.89
SVIP-204ENST00000530199 ARL14EPLP0DKL9 152 aa3.26□□□□□ -1.89
SVIP-204ENST00000530199 DDTP30046 118 aa3.26□□□□□ -1.89
SVIP-204ENST00000530199 TRAV13-1A0A0B4J241 112 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 A0A1W2PRE2 83 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 A8MWP4 228 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 IGLV6-57P01721 117 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 S100A2P29034 98 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 DEFA3P59666 94 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 BATFQ16520 125 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 FAM19A3Q7Z5A8 133 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 SMIM20Q8N5G0 67 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 HIST1H2BAQ96A08 127 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 CCDC32Q9BV29 185 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 XAGE1AQ9HD64 81 aa3.25□□□□□ -1.89
SVIP-204ENST00000530199 HMGB3O15347 200 aaKnown RBP3.24□□□□□ -1.89
SVIP-204ENST00000530199 LTAP01374 205 aa3.24□□□□□ -1.89
SVIP-204ENST00000530199 SCGB1A1P11684 91 aa3.24□□□□□ -1.89
SVIP-204ENST00000530199 GCHFRP30047 84 aa3.24□□□□□ -1.89
SVIP-204ENST00000530199 FOXA3P55318 350 aaPredicted RBP3.24□□□□□ -1.89
SVIP-204ENST00000530199 SSBP3-AS1Q7Z2R9 100 aa3.24□□□□□ -1.89
SVIP-204ENST00000530199 BORCS7Q96B45 105 aa3.24□□□□□ -1.89
SVIP-204ENST00000530199 TMEM167BQ9NRX6 74 aa3.24□□□□□ -1.89
SVIP-204ENST00000530199 SDHAF1A6NFY7 115 aa3.23□□□□□ -1.89
SVIP-204ENST00000530199 I3L3M4 83 aa3.23□□□□□ -1.89
SVIP-204ENST00000530199 NDUFB6O95139 128 aa3.23□□□□□ -1.89
SVIP-204ENST00000530199 PPBPP02775 128 aa3.23□□□□□ -1.89
SVIP-204ENST00000530199 TRGC1P0CF51 173 aa3.23□□□□□ -1.89
SVIP-204ENST00000530199 MP68P56378 58 aa3.23□□□□□ -1.89
SVIP-204ENST00000530199 CENPWQ5EE01 88 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms