RNA–Protein interactions for RNA: ENST00000517404.1

RMDN1-203, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 2

Gene RMDN1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-203ENST00000517404 HERC1Q15751 4861 aa-0.29□□□□□ -2.46
RMDN1-203ENST00000517404 MXRA5Q9NR99 2828 aa-0.29□□□□□ -2.46
RMDN1-203ENST00000517404 KNL1Q8NG31 2342 aa-0.3□□□□□ -2.46
RMDN1-203ENST00000517404 PDCD11Q14690 1871 aaKnown RBP-0.3□□□□□ -2.46
RMDN1-203ENST00000517404 NCMAPQ5T1S8 102 aa-0.3□□□□□ -2.46
RMDN1-203ENST00000517404 NBASA2RRP1 2371 aa-0.3□□□□□ -2.46
RMDN1-203ENST00000517404 FAT2Q9NYQ8 4349 aa-0.3□□□□□ -2.46
RMDN1-203ENST00000517404 IQSEC2Q5JU85 1478 aa-0.3□□□□□ -2.46
RMDN1-203ENST00000517404 CCDC141Q6ZP82 1450 aa-0.3□□□□□ -2.46
RMDN1-203ENST00000517404 SVEP1Q4LDE5 3571 aa-0.31□□□□□ -2.46
RMDN1-203ENST00000517404 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.31□□□□□ -2.46
RMDN1-203ENST00000517404 DOPEY1Q5JWR5 2465 aa-0.31□□□□□ -2.46
RMDN1-203ENST00000517404 COL5A1-AS1Q5SY13 56 aa-0.31□□□□□ -2.46
RMDN1-203ENST00000517404 FYCO1Q9BQS8 1478 aa-0.31□□□□□ -2.46
RMDN1-203ENST00000517404 USP9YO00507 2555 aaPredicted RBP-0.31□□□□□ -2.46
RMDN1-203ENST00000517404 EDC4Q6P2E9 1401 aaKnown RBP-0.31□□□□□ -2.46
RMDN1-203ENST00000517404 SPTBN4Q9H254 2564 aa-0.32□□□□□ -2.46
RMDN1-203ENST00000517404 BSNQ9UPA5 3926 aa-0.32□□□□□ -2.46
RMDN1-203ENST00000517404 RAPGEF2Q9Y4G8 1499 aa-0.32□□□□□ -2.46
RMDN1-203ENST00000517404 ARMS2P0C7Q2 107 aa-0.32□□□□□ -2.46
RMDN1-203ENST00000517404 SPRR2AP35326 72 aa-0.32□□□□□ -2.46
RMDN1-203ENST00000517404 MT4P47944 62 aa-0.32□□□□□ -2.46
RMDN1-203ENST00000517404 DEFB112Q30KQ8 113 aa-0.32□□□□□ -2.46
RMDN1-203ENST00000517404 H1FX-AS1Q4G0G2 97 aa-0.32□□□□□ -2.46
RMDN1-203ENST00000517404 HEPN1Q6WQI6 88 aa-0.32□□□□□ -2.46
RMDN1-203ENST00000517404 FASNP49327 2511 aaKnown RBP-0.32□□□□□ -2.46
RMDN1-203ENST00000517404 PCLOQ9Y6V0 5065 aa-0.32□□□□□ -2.46
RMDN1-203ENST00000517404 SONP18583 2426 aaKnown RBP-0.33□□□□□ -2.46
RMDN1-203ENST00000517404 NRXN1Q9ULB1 1477 aa-0.33□□□□□ -2.46
RMDN1-203ENST00000517404 KMT2CQ8NEZ4 4911 aaKnown RBP-0.33□□□□□ -2.46
RMDN1-203ENST00000517404 I3L3M4 83 aa-0.33□□□□□ -2.46
RMDN1-203ENST00000517404 M0R143 59 aa-0.33□□□□□ -2.46
RMDN1-203ENST00000517404 H0YGG7 62 aa-0.34□□□□□ -2.46
RMDN1-203ENST00000517404 LAMA5O15230 3695 aa-0.34□□□□□ -2.46
RMDN1-203ENST00000517404 SPRR2EP22531 72 aa-0.34□□□□□ -2.46
RMDN1-203ENST00000517404 FAUP35544 74 aaKnown RBP-0.34□□□□□ -2.46
RMDN1-203ENST00000517404 HECTD1Q9ULT8 2610 aa-0.34□□□□□ -2.46
RMDN1-203ENST00000517404 PDE4DIPQ5VU43 2346 aa-0.35□□□□□ -2.46
RMDN1-203ENST00000517404 C9orf62Q8N4C0 152 aa-0.35□□□□□ -2.47
RMDN1-203ENST00000517404 ACACAQ13085 2346 aa-0.35□□□□□ -2.47
RMDN1-203ENST00000517404 ABCC2Q92887 1545 aa-0.35□□□□□ -2.47
RMDN1-203ENST00000517404 ITPR3Q14573 2671 aa-0.35□□□□□ -2.47
RMDN1-203ENST00000517404 TACC2O95359 2948 aa-0.35□□□□□ -2.47
RMDN1-203ENST00000517404 FMN2Q9NZ56 1722 aa-0.35□□□□□ -2.47
RMDN1-203ENST00000517404 FAT1Q14517 4588 aa-0.36□□□□□ -2.47
RMDN1-203ENST00000517404 USH2AO75445 5202 aa-0.36□□□□□ -2.47
RMDN1-203ENST00000517404 FLGP20930 4061 aaPredicted RBP-0.36□□□□□ -2.47
RMDN1-203ENST00000517404 UQCRHLA0A096LP55 91 aa-0.36□□□□□ -2.47
RMDN1-203ENST00000517404 HMGN3Q15651 99 aa-0.36□□□□□ -2.47
RMDN1-203ENST00000517404 LELP1Q5T871 98 aa-0.36□□□□□ -2.47
RMDN1-203ENST00000517404 MYO18BQ8IUG5 2567 aa-0.36□□□□□ -2.47
RMDN1-203ENST00000517404 KNDC1Q76NI1 1749 aa-0.36□□□□□ -2.47
RMDN1-203ENST00000517404 PKHD1P08F94 4074 aa-0.36□□□□□ -2.47
RMDN1-203ENST00000517404 NKTRP30414 1462 aaKnown RBP-0.36□□□□□ -2.47
RMDN1-203ENST00000517404 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.36□□□□□ -2.47
RMDN1-203ENST00000517404 SLIT1O75093 1534 aa-0.37□□□□□ -2.47
RMDN1-203ENST00000517404 PRRC2CQ9Y520 2896 aaKnown RBP-0.37□□□□□ -2.47
RMDN1-203ENST00000517404 HIVEP1P15822 2718 aa-0.37□□□□□ -2.47
RMDN1-203ENST00000517404 TRBV7-7A0A0K0K1E9 115 aa-0.37□□□□□ -2.47
RMDN1-203ENST00000517404 H3BNG1 76 aa-0.37□□□□□ -2.47
RMDN1-203ENST00000517404 WFDC13Q8IUB5 93 aa-0.37□□□□□ -2.47
RMDN1-203ENST00000517404 MRPL34Q9BQ48 92 aaKnown RBP-0.37□□□□□ -2.47
RMDN1-203ENST00000517404 PSENENQ9NZ42 101 aa-0.37□□□□□ -2.47
RMDN1-203ENST00000517404 CDKN2A-AS1Q9UH64 79 aa-0.37□□□□□ -2.47
RMDN1-203ENST00000517404 SPTY2D1-AS1A0A0U1RR47 76 aa-0.38□□□□□ -2.47
RMDN1-203ENST00000517404 ETDBQ3ZM63 59 aa-0.38□□□□□ -2.47
RMDN1-203ENST00000517404 ZNF720Q7Z2F6 126 aa-0.38□□□□□ -2.47
RMDN1-203ENST00000517404 HERC2O95714 4834 aa-0.38□□□□□ -2.47
RMDN1-203ENST00000517404 PAPPA2Q9BXP8 1791 aa-0.38□□□□□ -2.47
RMDN1-203ENST00000517404 AKAP13Q12802 2813 aa-0.38□□□□□ -2.47
RMDN1-203ENST00000517404 TARBP1Q13395 1621 aaKnown RBP-0.38□□□□□ -2.47
RMDN1-203ENST00000517404 CCDC168Q8NDH2 2452 aa-0.39□□□□□ -2.47
RMDN1-203ENST00000517404 ALKAL2Q6UX46 152 aa-0.39□□□□□ -2.47
RMDN1-203ENST00000517404 SPRR2FQ96RM1 72 aa-0.39□□□□□ -2.47
RMDN1-203ENST00000517404 HIGD1BQ9P298 99 aa-0.39□□□□□ -2.47
RMDN1-203ENST00000517404 MTORP42345 2549 aa-0.39□□□□□ -2.47
RMDN1-203ENST00000517404 STARD9Q9P2P6 4700 aa-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 NEBP20929 6669 aa-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 MGAM2Q2M2H8 2515 aa-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 UBR4Q5T4S7 5183 aa-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 MARF1Q9Y4F3 1742 aaKnown RBP-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 D6R8Y8 96 aa-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 CCL22O00626 93 aa-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 MUSTN1Q8IVN3 82 aa-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 TROQ12816 1431 aaPredicted RBP-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 VPS8Q8N3P4 1428 aa-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 REV3LO60673 3130 aa-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 LRRK2Q5S007 2527 aa-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 PRKDCP78527 4128 aaKnown RBP-0.4□□□□□ -2.47
RMDN1-203ENST00000517404 TNRC18O15417 2968 aaPredicted RBP-0.41□□□□□ -2.47
RMDN1-203ENST00000517404 TRANK1O15050 2925 aa-0.41□□□□□ -2.48
RMDN1-203ENST00000517404 F8WEM9 126 aa-0.41□□□□□ -2.48
RMDN1-203ENST00000517404 LEPROTL1O95214 131 aa-0.41□□□□□ -2.48
RMDN1-203ENST00000517404 S100A8P05109 93 aa-0.41□□□□□ -2.48
RMDN1-203ENST00000517404 CLIP1P30622 1438 aa-0.41□□□□□ -2.48
RMDN1-203ENST00000517404 TEP1Q99973 2627 aaKnown RBP-0.41□□□□□ -2.48
RMDN1-203ENST00000517404 UTP20O75691 2785 aaKnown RBP-0.41□□□□□ -2.48
RMDN1-203ENST00000517404 ABCC10Q5T3U5 1492 aa-0.41□□□□□ -2.48
RMDN1-203ENST00000517404 PKD1L2Q7Z442 2459 aa-0.42□□□□□ -2.48
RMDN1-203ENST00000517404 SHPRHQ149N8 1683 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms