RNA–Protein interactions for RNA: ENST00000517404.1

RMDN1-203, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 2

Gene RMDN1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-203ENST00000517404 AEBP2Q6ZN18 517 aaPredicted RBP33.3■■■□□ 2.92
RMDN1-203ENST00000517404 CHIC1Q5VXU3 224 aa30.97■■■□□ 2.55
RMDN1-203ENST00000517404 SENP3Q9H4L4 574 aaPredicted RBP28.45■■■□□ 2.14
RMDN1-203ENST00000517404 PHF23Q9BUL5 403 aaPredicted RBP27.99■■■□□ 2.07
RMDN1-203ENST00000517404 FOXD1Q16676 465 aa26.71■■□□□ 1.87
RMDN1-203ENST00000517404 POTEDQ86YR6 584 aa26.45■■□□□ 1.82
RMDN1-203ENST00000517404 MSH5O43196 834 aa25.3■■□□□ 1.64
RMDN1-203ENST00000517404 PIAS4Q8N2W9 510 aaPredicted RBP24.64■■□□□ 1.54
RMDN1-203ENST00000517404 PPP6R1Q9UPN7 881 aa24.26■■□□□ 1.47
RMDN1-203ENST00000517404 ADRA2BP18089 450 aa24.07■■□□□ 1.44
RMDN1-203ENST00000517404 PLPPR3Q6T4P5 718 aa23.95■■□□□ 1.42
RMDN1-203ENST00000517404 DMRT2Q9Y5R5 561 aa22.45■■□□□ 1.18
RMDN1-203ENST00000517404 MAPK8IP2Q13387 824 aaPredicted RBP22.44■■□□□ 1.18
RMDN1-203ENST00000517404 CACNB1Q02641 598 aaPredicted RBP22.3■■□□□ 1.16
RMDN1-203ENST00000517404 SCAF1Q9H7N4 1312 aaKnown RBP21.92■■□□□ 1.1
RMDN1-203ENST00000517404 RNF39Q9H2S5 420 aa21.55■■□□□ 1.04
RMDN1-203ENST00000517404 DCAF8L1A6NGE4 600 aa21.47■■□□□ 1.03
RMDN1-203ENST00000517404 HOXD11P31277 338 aaPredicted RBP21.25■□□□□ 0.99
RMDN1-203ENST00000517404 C1QBPQ07021 282 aaKnown RBP21.14■□□□□ 0.97
RMDN1-203ENST00000517404 PPP4R3CPQ6ZMV5 832 aa20.89■□□□□ 0.93
RMDN1-203ENST00000517404 RNF216Q9NWF9 866 aaPredicted RBP20.79■□□□□ 0.92
RMDN1-203ENST00000517404 CNKSR2Q8WXI2 1034 aa20.71■□□□□ 0.91
RMDN1-203ENST00000517404 DNAJC5BQ9UF47 199 aa20.71■□□□□ 0.91
RMDN1-203ENST00000517404 POTEHQ6S545 545 aa20.5■□□□□ 0.87
RMDN1-203ENST00000517404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.15■□□□□ 0.82
RMDN1-203ENST00000517404 DSG3P32926 999 aa19.85■□□□□ 0.77
RMDN1-203ENST00000517404 SPINK5Q9NQ38 1064 aaPredicted RBP19.72■□□□□ 0.75
RMDN1-203ENST00000517404 NCBP3Q53F19 620 aaKnown RBP19.71■□□□□ 0.75
RMDN1-203ENST00000517404 U3KPZ7 1027 aaPredicted RBP19.7■□□□□ 0.74
RMDN1-203ENST00000517404 CAPN15O75808 1086 aa19.64■□□□□ 0.73
RMDN1-203ENST00000517404 NPM3O75607 178 aaKnown RBP19.53■□□□□ 0.72
RMDN1-203ENST00000517404 ABCB7O75027 752 aa19.13■□□□□ 0.65
RMDN1-203ENST00000517404 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
RMDN1-203ENST00000517404 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
RMDN1-203ENST00000517404 SLC4A2P04920 1241 aa18.95■□□□□ 0.62
RMDN1-203ENST00000517404 APLP2Q06481 763 aa18.9■□□□□ 0.62
RMDN1-203ENST00000517404 CHRDL2Q6WN34 429 aa18.9■□□□□ 0.62
RMDN1-203ENST00000517404 RBM42Q9BTD8 480 aaKnown RBP18.87■□□□□ 0.61
RMDN1-203ENST00000517404 SP7Q8TDD2 431 aaPredicted RBP18.75■□□□□ 0.59
RMDN1-203ENST00000517404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.69■□□□□ 0.58
RMDN1-203ENST00000517404 HNRNPUL2Q1KMD3 747 aaKnown RBP18.69■□□□□ 0.58
RMDN1-203ENST00000517404 SAMD1Q6SPF0 538 aaPredicted RBP18.56■□□□□ 0.56
RMDN1-203ENST00000517404 POLA2Q14181 598 aa18.4■□□□□ 0.54
RMDN1-203ENST00000517404 KCNA4P22459 653 aa18.27■□□□□ 0.52
RMDN1-203ENST00000517404 PIP4P2Q8N4L2 257 aa18.27■□□□□ 0.52
RMDN1-203ENST00000517404 AKT1S1Q96B36 256 aa18.27■□□□□ 0.52
RMDN1-203ENST00000517404 HAX1O00165 279 aa18.15■□□□□ 0.5
RMDN1-203ENST00000517404 REM2Q8IYK8 340 aaPredicted RBP18.13■□□□□ 0.49
RMDN1-203ENST00000517404 MYCNP04198 464 aaPredicted RBP18.02■□□□□ 0.48
RMDN1-203ENST00000517404 FXR2P51116 673 aaKnown RBP eCLIP18.02■□□□□ 0.48
RMDN1-203ENST00000517404 EVX2Q03828 476 aa17.97■□□□□ 0.47
RMDN1-203ENST00000517404 PITPNM1O00562 1244 aa17.95■□□□□ 0.46
RMDN1-203ENST00000517404 ZBTB12Q9Y330 459 aaPredicted RBP17.87■□□□□ 0.45
RMDN1-203ENST00000517404 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
RMDN1-203ENST00000517404 ATF5Q9Y2D1 282 aaPredicted RBP17.8■□□□□ 0.44
RMDN1-203ENST00000517404 LHX8Q68G74 356 aa17.57■□□□□ 0.4
RMDN1-203ENST00000517404 C19orf67A6NJJ6 358 aa17.47■□□□□ 0.39
RMDN1-203ENST00000517404 GABBR2O75899 941 aa17.45■□□□□ 0.38
RMDN1-203ENST00000517404 PRKAR2AP13861 404 aaKnown RBP17.44■□□□□ 0.38
RMDN1-203ENST00000517404 FOXD4L1Q9NU39 408 aa17.31■□□□□ 0.36
RMDN1-203ENST00000517404 SPDYE2BA6NHP3 402 aa17.29■□□□□ 0.36
RMDN1-203ENST00000517404 SPDYE6P0CI01 402 aa17.29■□□□□ 0.36
RMDN1-203ENST00000517404 SPDYE2Q495Y8 402 aa17.29■□□□□ 0.36
RMDN1-203ENST00000517404 CLEC11AQ9Y240 323 aa17.22■□□□□ 0.35
RMDN1-203ENST00000517404 SPDYE1Q8NFV5 336 aaPredicted RBP17.21■□□□□ 0.35
RMDN1-203ENST00000517404 PLSCR2Q9NRY7 297 aa17.21■□□□□ 0.35
RMDN1-203ENST00000517404 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
RMDN1-203ENST00000517404 CHADLQ6NUI6 762 aa17.06■□□□□ 0.32
RMDN1-203ENST00000517404 FBLN2P98095 1184 aa17.01■□□□□ 0.31
RMDN1-203ENST00000517404 SSUH2Q9Y2M2 353 aa17■□□□□ 0.31
RMDN1-203ENST00000517404 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
RMDN1-203ENST00000517404 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
RMDN1-203ENST00000517404 MKRN4PQ13434 485 aaPredicted RBP16.91■□□□□ 0.3
RMDN1-203ENST00000517404 ATXN8OSP0DMR3 200 aa16.89■□□□□ 0.29
RMDN1-203ENST00000517404 ZBTB22O15209 634 aa16.83■□□□□ 0.28
RMDN1-203ENST00000517404 CD44P16070 742 aaKnown RBP16.82■□□□□ 0.28
RMDN1-203ENST00000517404 PRR29P0C7W0 189 aa16.81■□□□□ 0.28
RMDN1-203ENST00000517404 CLCN6P51797 869 aa16.78■□□□□ 0.28
RMDN1-203ENST00000517404 FARP1Q9Y4F1 1045 aaPredicted RBP16.7■□□□□ 0.26
RMDN1-203ENST00000517404 DCBLD2Q96PD2 775 aa16.69■□□□□ 0.26
RMDN1-203ENST00000517404 OTUD5Q96G74 571 aa16.66■□□□□ 0.26
RMDN1-203ENST00000517404 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
RMDN1-203ENST00000517404 POTEMA6NI47 508 aa16.58■□□□□ 0.24
RMDN1-203ENST00000517404 POTEB2H3BUK9 544 aa16.55■□□□□ 0.24
RMDN1-203ENST00000517404 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
RMDN1-203ENST00000517404 POTEGQ6S5H5 508 aa16.5■□□□□ 0.23
RMDN1-203ENST00000517404 GALR2O43603 387 aaPredicted RBP16.43■□□□□ 0.22
RMDN1-203ENST00000517404 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
RMDN1-203ENST00000517404 PCDH10Q9P2E7 1040 aa16.35■□□□□ 0.21
RMDN1-203ENST00000517404 PELP1Q8IZL8 1130 aaKnown RBP16.25■□□□□ 0.19
RMDN1-203ENST00000517404 CREBZFQ9NS37 354 aa16.24■□□□□ 0.19
RMDN1-203ENST00000517404 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
RMDN1-203ENST00000517404 LCE2DQ5TA82 110 aaPredicted RBP16.16■□□□□ 0.18
RMDN1-203ENST00000517404 PHF12Q96QT6 1004 aa16.14■□□□□ 0.17
RMDN1-203ENST00000517404 METRNQ9UJH8 293 aa16.05■□□□□ 0.16
RMDN1-203ENST00000517404 ASTLQ6HA08 431 aaPredicted RBP16.03■□□□□ 0.16
RMDN1-203ENST00000517404 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
RMDN1-203ENST00000517404 C7P10643 843 aa15.98■□□□□ 0.15
RMDN1-203ENST00000517404 MAMSTRQ6ZN01 415 aa15.97■□□□□ 0.15
RMDN1-203ENST00000517404 SLC39A7Q92504 469 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms