RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 LINC01561Q8N1V8 128 aa4.7□□□□□ -1.66
SH3D19-208ENST00000508492 PACRGQ96M98 296 aaPredicted RBP4.7□□□□□ -1.66
SH3D19-208ENST00000508492 SCGB3A1Q96QR1 104 aa4.7□□□□□ -1.66
SH3D19-208ENST00000508492 XAGE1AQ9HD64 81 aa4.7□□□□□ -1.66
SH3D19-208ENST00000508492 IGLV7-46A0A075B6I9 117 aa4.69□□□□□ -1.66
SH3D19-208ENST00000508492 IGLV7-43P04211 117 aa4.69□□□□□ -1.66
SH3D19-208ENST00000508492 SPINK8P0C7L1 97 aa4.69□□□□□ -1.66
SH3D19-208ENST00000508492 HERVK_113P63121 156 aa4.69□□□□□ -1.66
SH3D19-208ENST00000508492 RHEBQ15382 184 aa4.69□□□□□ -1.66
SH3D19-208ENST00000508492 Q8IZM0 81 aa4.69□□□□□ -1.66
SH3D19-208ENST00000508492 GEMIN7Q9H840 131 aaKnown RBP4.69□□□□□ -1.66
SH3D19-208ENST00000508492 CKS1BP61024 79 aa4.68□□□□□ -1.66
SH3D19-208ENST00000508492 UBE2BP63146 152 aa4.68□□□□□ -1.66
SH3D19-208ENST00000508492 C6orf226Q5I0X4 101 aa4.68□□□□□ -1.66
SH3D19-208ENST00000508492 REG3GQ6UW15 175 aa4.68□□□□□ -1.66
SH3D19-208ENST00000508492 FA2HQ7L5A8 372 aa4.68□□□□□ -1.66
SH3D19-208ENST00000508492 C18orf32Q8TCD1 76 aa4.68□□□□□ -1.66
SH3D19-208ENST00000508492 CST9LQ9H4G1 147 aa4.68□□□□□ -1.66
SH3D19-208ENST00000508492 TINCRA0A1B0GVN0 87 aa4.67□□□□□ -1.66
SH3D19-208ENST00000508492 APOC3P02656 99 aa4.67□□□□□ -1.66
SH3D19-208ENST00000508492 COX7B2Q8TF08 81 aa4.67□□□□□ -1.66
SH3D19-208ENST00000508492 SMCO4Q9NRQ5 59 aa4.67□□□□□ -1.66
SH3D19-208ENST00000508492 TRAPPC1Q9Y5R8 145 aa4.67□□□□□ -1.66
SH3D19-208ENST00000508492 LRP2P98164 4655 aa4.66□□□□□ -1.66
SH3D19-208ENST00000508492 LPAP08519 4548 aa4.66□□□□□ -1.66
SH3D19-208ENST00000508492 F8VRH5 84 aa4.66□□□□□ -1.66
SH3D19-208ENST00000508492 SCO1O75880 301 aa4.66□□□□□ -1.66
SH3D19-208ENST00000508492 KRTAP1-4P0C5Y4 121 aa4.66□□□□□ -1.66
SH3D19-208ENST00000508492 PMVKQ15126 192 aa4.66□□□□□ -1.66
SH3D19-208ENST00000508492 YPEL4Q96NS1 127 aa4.66□□□□□ -1.66
SH3D19-208ENST00000508492 C22orf24Q9Y442 160 aa4.66□□□□□ -1.66
SH3D19-208ENST00000508492 H0Y9J4 135 aa4.65□□□□□ -1.67
SH3D19-208ENST00000508492 ZNF22P17026 224 aaPredicted RBP4.65□□□□□ -1.67
SH3D19-208ENST00000508492 NDUFA6P56556 154 aa4.65□□□□□ -1.67
SH3D19-208ENST00000508492 RAB5BP61020 215 aa4.65□□□□□ -1.67
SH3D19-208ENST00000508492 SEC11AP67812 179 aa4.65□□□□□ -1.67
SH3D19-208ENST00000508492 COX19Q49B96 90 aa4.65□□□□□ -1.67
SH3D19-208ENST00000508492 PDZD11Q5EBL8 140 aa4.65□□□□□ -1.67
SH3D19-208ENST00000508492 LINC00518Q8N0U6 118 aa4.65□□□□□ -1.67
SH3D19-208ENST00000508492 C11orf86A6NJI1 115 aa4.64□□□□□ -1.67
SH3D19-208ENST00000508492 LINC00614P0C842 121 aa4.64□□□□□ -1.67
SH3D19-208ENST00000508492 IGLC3P0DOY3 106 aa4.64□□□□□ -1.67
SH3D19-208ENST00000508492 G0S2P27469 103 aa4.64□□□□□ -1.67
SH3D19-208ENST00000508492 NDUFA5Q16718 116 aa4.64□□□□□ -1.67
SH3D19-208ENST00000508492 Q8NDZ9 215 aa4.64□□□□□ -1.67
SH3D19-208ENST00000508492 DIRC1Q969H9 104 aa4.64□□□□□ -1.67
SH3D19-208ENST00000508492 RPL37AP8A6NKH3 93 aa4.63□□□□□ -1.67
SH3D19-208ENST00000508492 HBDP02042 147 aa4.63□□□□□ -1.67
SH3D19-208ENST00000508492 MT3P25713 68 aa4.63□□□□□ -1.67
SH3D19-208ENST00000508492 CXCL5P42830 114 aa4.63□□□□□ -1.67
SH3D19-208ENST00000508492 CBLN2Q8IUK8 224 aa4.63□□□□□ -1.67
SH3D19-208ENST00000508492 SNAPINO95295 136 aa4.62□□□□□ -1.67
SH3D19-208ENST00000508492 PFN2P35080 140 aa4.62□□□□□ -1.67
SH3D19-208ENST00000508492 MRPL55Q7Z7F7 128 aaKnown RBP4.62□□□□□ -1.67
SH3D19-208ENST00000508492 SVBPQ8N300 66 aa4.62□□□□□ -1.67
SH3D19-208ENST00000508492 ZNF625Q96I27 306 aaPredicted RBP4.62□□□□□ -1.67
SH3D19-208ENST00000508492 LINC00167Q96N53 147 aa4.62□□□□□ -1.67
SH3D19-208ENST00000508492 BAGE3Q86Y29 109 aa4.61□□□□□ -1.67
SH3D19-208ENST00000508492 NDUFAF8A1L188 74 aa4.6□□□□□ -1.67
SH3D19-208ENST00000508492 LINC01549A6NIU2 74 aa4.6□□□□□ -1.67
SH3D19-208ENST00000508492 H3BRM9 83 aa4.6□□□□□ -1.67
SH3D19-208ENST00000508492 ZNF861PO60384 105 aa4.6□□□□□ -1.67
SH3D19-208ENST00000508492 TMEM170BQ5T4T1 132 aa4.6□□□□□ -1.67
SH3D19-208ENST00000508492 FAM19A2Q8N3H0 131 aa4.6□□□□□ -1.67
SH3D19-208ENST00000508492 Q8NBF4 154 aa4.6□□□□□ -1.67
SH3D19-208ENST00000508492 OCR1Q9BZK8 76 aa4.6□□□□□ -1.67
SH3D19-208ENST00000508492 ANAPC11Q9NYG5 84 aa4.6□□□□□ -1.67
SH3D19-208ENST00000508492 TP73-AS1Q9UF72 201 aa4.6□□□□□ -1.67
SH3D19-208ENST00000508492 IGKV2-28A0A075B6P5 120 aa4.59□□□□□ -1.67
SH3D19-208ENST00000508492 ATP5LO75964 103 aa4.59□□□□□ -1.67
SH3D19-208ENST00000508492 IGKV2D-28P01615 120 aa4.59□□□□□ -1.67
SH3D19-208ENST00000508492 SND1-IT1Q9HBX3 110 aa4.59□□□□□ -1.67
SH3D19-208ENST00000508492 ERG28Q9UKR5 140 aa4.59□□□□□ -1.67
SH3D19-208ENST00000508492 CHTOPQ9Y3Y2 248 aaKnown RBP4.59□□□□□ -1.67
SH3D19-208ENST00000508492 TMEM238C9JI98 176 aa4.58□□□□□ -1.68
SH3D19-208ENST00000508492 NUPR1O60356 82 aa4.58□□□□□ -1.68
SH3D19-208ENST00000508492 BCE1O60756 84 aa4.58□□□□□ -1.68
SH3D19-208ENST00000508492 KRTAP13-1Q8IUC0 172 aa4.58□□□□□ -1.68
SH3D19-208ENST00000508492 IFI27L1Q96BM0 104 aa4.58□□□□□ -1.68
SH3D19-208ENST00000508492 IGLV1-50A0A075B6I6 118 aa4.57□□□□□ -1.68
SH3D19-208ENST00000508492 TMEM223A0PJW6 202 aa4.57□□□□□ -1.68
SH3D19-208ENST00000508492 COLCA2A8K830 154 aa4.57□□□□□ -1.68
SH3D19-208ENST00000508492 H0Y8G0 127 aa4.57□□□□□ -1.68
SH3D19-208ENST00000508492 TRGC2P03986 189 aa4.57□□□□□ -1.68
SH3D19-208ENST00000508492 NDUFV3P56181 108 aaKnown RBP4.57□□□□□ -1.68
SH3D19-208ENST00000508492 PRLHP81277 87 aa4.57□□□□□ -1.68
SH3D19-208ENST00000508492 NKAPP1Q8N9T2 125 aa4.57□□□□□ -1.68
SH3D19-208ENST00000508492 TSPEAR-AS2P59090 65 aa4.56□□□□□ -1.68
SH3D19-208ENST00000508492 KRTAP13-2Q52LG2 175 aa4.56□□□□□ -1.68
SH3D19-208ENST00000508492 CHCHD1Q96BP2 118 aaKnown RBP4.56□□□□□ -1.68
SH3D19-208ENST00000508492 RNF213Q63HN8 5207 aa4.56□□□□□ -1.68
SH3D19-208ENST00000508492 TRAV12-1A0A0B4J245 112 aa4.55□□□□□ -1.68
SH3D19-208ENST00000508492 HSBP1O75506 76 aa4.55□□□□□ -1.68
SH3D19-208ENST00000508492 SERF1AO75920 110 aa4.55□□□□□ -1.68
SH3D19-208ENST00000508492 TSPAN13O95857 204 aa4.55□□□□□ -1.68
SH3D19-208ENST00000508492 SMIM13P0DJ93 91 aa4.55□□□□□ -1.68
SH3D19-208ENST00000508492 RPL28P46779 137 aaKnown RBP4.55□□□□□ -1.68
SH3D19-208ENST00000508492 UBE2AP49459 152 aa4.55□□□□□ -1.68
SH3D19-208ENST00000508492 PMCHL2Q9BQD1 86 aa4.55□□□□□ -1.68
SH3D19-208ENST00000508492 M0R378 163 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms