RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 KLK9Q2XQG4 91 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 FXYD6Q9H0Q3 95 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 V9GYS6 101 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 PKD1L1Q8TDX9 2849 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 UBR5O95071 2799 aaPredicted RBP-0.04□□□□□ -2.42
SMN2-208ENST00000508258 KMT2AQ03164 3969 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 NEXMIFQ5QGS0 1516 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 NCOR1O75376 2440 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 QSER1Q2KHR3 1735 aa-0.04□□□□□ -2.42
SMN2-208ENST00000508258 DNAJC13O75165 2243 aa-0.05□□□□□ -2.42
SMN2-208ENST00000508258 GOLGA4Q13439 2230 aaKnown RBP-0.05□□□□□ -2.42
SMN2-208ENST00000508258 MYH4Q9Y623 1939 aa-0.05□□□□□ -2.42
SMN2-208ENST00000508258 CPSF4LA6NMK7 179 aaKnown RBP-0.05□□□□□ -2.42
SMN2-208ENST00000508258 I3L3M4 83 aa-0.05□□□□□ -2.42
SMN2-208ENST00000508258 RGPD3A6NKT7 1758 aaPredicted RBP-0.05□□□□□ -2.42
SMN2-208ENST00000508258 DOPEY2Q9Y3R5 2298 aa-0.05□□□□□ -2.42
SMN2-208ENST00000508258 ABCA2Q9BZC7 2435 aa-0.05□□□□□ -2.42
SMN2-208ENST00000508258 TMEM131LA2VDJ0 1609 aa-0.05□□□□□ -2.42
SMN2-208ENST00000508258 ALMS1Q8TCU4 4167 aa-0.05□□□□□ -2.42
SMN2-208ENST00000508258 SMARCA2P51531 1590 aa-0.06□□□□□ -2.42
SMN2-208ENST00000508258 BSNQ9UPA5 3926 aa-0.06□□□□□ -2.42
SMN2-208ENST00000508258 SMIM11AP58511 58 aa-0.06□□□□□ -2.42
SMN2-208ENST00000508258 PEA15Q15121 130 aa-0.06□□□□□ -2.42
SMN2-208ENST00000508258 NMSQ5H8A3 153 aa-0.06□□□□□ -2.42
SMN2-208ENST00000508258 PYY3Q5JQD4 70 aa-0.06□□□□□ -2.42
SMN2-208ENST00000508258 MRPL34Q9BQ48 92 aaKnown RBP-0.06□□□□□ -2.42
SMN2-208ENST00000508258 Q9H521 79 aa-0.06□□□□□ -2.42
SMN2-208ENST00000508258 APLNQ9ULZ1 77 aa-0.06□□□□□ -2.42
SMN2-208ENST00000508258 ATP7BP35670 1465 aa-0.06□□□□□ -2.42
SMN2-208ENST00000508258 MAGI2Q86UL8 1455 aa-0.06□□□□□ -2.42
SMN2-208ENST00000508258 KIF20BQ96Q89 1820 aa-0.06□□□□□ -2.42
SMN2-208ENST00000508258 DMBT1Q9UGM3 2413 aaPredicted RBP-0.06□□□□□ -2.42
SMN2-208ENST00000508258 COL14A1Q05707 1796 aaKnown RBP-0.06□□□□□ -2.42
SMN2-208ENST00000508258 RGPD1P0DJD0 1748 aa-0.07□□□□□ -2.42
SMN2-208ENST00000508258 GVINP1Q7Z2Y8 2422 aa-0.07□□□□□ -2.42
SMN2-208ENST00000508258 PVALEFA0A1B0GWK0 134 aa-0.07□□□□□ -2.42
SMN2-208ENST00000508258 K7EP34 96 aa-0.07□□□□□ -2.42
SMN2-208ENST00000508258 DEFB112Q30KQ8 113 aa-0.07□□□□□ -2.42
SMN2-208ENST00000508258 H1FX-AS1Q4G0G2 97 aa-0.07□□□□□ -2.42
SMN2-208ENST00000508258 MAP3K4Q9Y6R4 1608 aa-0.07□□□□□ -2.42
SMN2-208ENST00000508258 PTPN13Q12923 2485 aa-0.07□□□□□ -2.42
SMN2-208ENST00000508258 PLIN4Q96Q06 1357 aa-0.07□□□□□ -2.42
SMN2-208ENST00000508258 SPTBN1Q01082 2364 aaKnown RBP-0.08□□□□□ -2.42
SMN2-208ENST00000508258 LRRC7Q96NW7 1537 aa-0.08□□□□□ -2.42
SMN2-208ENST00000508258 PREX1Q8TCU6 1659 aa-0.08□□□□□ -2.42
SMN2-208ENST00000508258 KIF14Q15058 1648 aa-0.08□□□□□ -2.42
SMN2-208ENST00000508258 PPLO60437 1756 aa-0.08□□□□□ -2.42
SMN2-208ENST00000508258 RGPD2P0DJD1 1756 aa-0.08□□□□□ -2.42
SMN2-208ENST00000508258 FLNCQ14315 2725 aa-0.08□□□□□ -2.42
SMN2-208ENST00000508258 SPTY2D1-AS1A0A0U1RR47 76 aa-0.08□□□□□ -2.42
SMN2-208ENST00000508258 IQCF6A8MYZ5 107 aa-0.08□□□□□ -2.42
SMN2-208ENST00000508258 PLGLAQ15195 96 aa-0.08□□□□□ -2.42
SMN2-208ENST00000508258 C9orf62Q8N4C0 152 aa-0.08□□□□□ -2.42
SMN2-208ENST00000508258 LRP2P98164 4655 aa-0.08□□□□□ -2.42
SMN2-208ENST00000508258 URB1O60287 2271 aaKnown RBP-0.08□□□□□ -2.42
SMN2-208ENST00000508258 BCORQ6W2J9 1755 aa-0.09□□□□□ -2.42
SMN2-208ENST00000508258 PRKDCP78527 4128 aaKnown RBP-0.09□□□□□ -2.42
SMN2-208ENST00000508258 HECTD4Q9Y4D8 3996 aa-0.09□□□□□ -2.42
SMN2-208ENST00000508258 SUPT6HQ7KZ85 1726 aaKnown RBP-0.09□□□□□ -2.42
SMN2-208ENST00000508258 RB1CC1Q8TDY2 1594 aa-0.09□□□□□ -2.42
SMN2-208ENST00000508258 CLIP1P30622 1438 aa-0.09□□□□□ -2.42
SMN2-208ENST00000508258 A0A1B0GUT8 65 aa-0.09□□□□□ -2.42
SMN2-208ENST00000508258 LOC730098B7Z3J9 87 aa-0.09□□□□□ -2.42
SMN2-208ENST00000508258 CCL22O00626 93 aa-0.09□□□□□ -2.42
SMN2-208ENST00000508258 COX7BP24311 80 aa-0.09□□□□□ -2.42
SMN2-208ENST00000508258 SPRR2BP35325 72 aa-0.09□□□□□ -2.42
SMN2-208ENST00000508258 LELP1Q5T871 98 aa-0.09□□□□□ -2.42
SMN2-208ENST00000508258 S100A16Q96FQ6 103 aaKnown RBP-0.09□□□□□ -2.42
SMN2-208ENST00000508258 USP32Q8NFA0 1604 aa-0.09□□□□□ -2.42
SMN2-208ENST00000508258 LRRC9Q6ZRR7 1453 aa-0.1□□□□□ -2.42
SMN2-208ENST00000508258 MYMXA0A1B0GTQ4 84 aa-0.1□□□□□ -2.43
SMN2-208ENST00000508258 M0R2T5 61 aa-0.1□□□□□ -2.43
SMN2-208ENST00000508258 CYB5AP00167 134 aa-0.1□□□□□ -2.43
SMN2-208ENST00000508258 GNG2P59768 71 aa-0.1□□□□□ -2.43
SMN2-208ENST00000508258 SNRPFP62306 86 aaKnown RBP-0.1□□□□□ -2.43
SMN2-208ENST00000508258 LRP1BQ9NZR2 4599 aa-0.1□□□□□ -2.43
SMN2-208ENST00000508258 POLR1AO95602 1720 aaPredicted RBP-0.1□□□□□ -2.43
SMN2-208ENST00000508258 MED14O60244 1454 aa-0.1□□□□□ -2.43
SMN2-208ENST00000508258 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.11□□□□□ -2.43
SMN2-208ENST00000508258 ATRQ13535 2644 aa-0.11□□□□□ -2.43
SMN2-208ENST00000508258 CSPG4Q6UVK1 2322 aa-0.11□□□□□ -2.43
SMN2-208ENST00000508258 TDRG1Q3Y452 100 aa-0.11□□□□□ -2.43
SMN2-208ENST00000508258 LINC00643Q86TS7 51 aa-0.11□□□□□ -2.43
SMN2-208ENST00000508258 RABAC1Q9UI14 185 aa-0.11□□□□□ -2.43
SMN2-208ENST00000508258 TIAM2Q8IVF5 1701 aa-0.11□□□□□ -2.43
SMN2-208ENST00000508258 ZNF831Q5JPB2 1677 aa-0.11□□□□□ -2.43
SMN2-208ENST00000508258 RGPD8O14715 1765 aaPredicted RBP-0.11□□□□□ -2.43
SMN2-208ENST00000508258 RGPD5Q99666 1765 aa-0.11□□□□□ -2.43
SMN2-208ENST00000508258 UACAQ9BZF9 1416 aa-0.12□□□□□ -2.43
SMN2-208ENST00000508258 GAFA1Q96PS6 74 aa-0.12□□□□□ -2.43
SMN2-208ENST00000508258 CDKN2A-AS1Q9UH64 79 aa-0.12□□□□□ -2.43
SMN2-208ENST00000508258 EP300Q09472 2414 aaPredicted RBP-0.12□□□□□ -2.43
SMN2-208ENST00000508258 UBR3Q6ZT12 1888 aa-0.12□□□□□ -2.43
SMN2-208ENST00000508258 LTN1O94822 1766 aa-0.13□□□□□ -2.43
SMN2-208ENST00000508258 TRAV21A0A0B4J279 112 aa-0.13□□□□□ -2.43
SMN2-208ENST00000508258 ACYP1P07311 99 aa-0.13□□□□□ -2.43
SMN2-208ENST00000508258 HEPN1Q6WQI6 88 aa-0.13□□□□□ -2.43
SMN2-208ENST00000508258 REV3LO60673 3130 aa-0.13□□□□□ -2.43
SMN2-208ENST00000508258 COL6A3P12111 3177 aa-0.13□□□□□ -2.43
SMN2-208ENST00000508258 MAGI3Q5TCQ9 1506 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms