RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 SHPRHQ149N8 1683 aa0.42□□□□□ -2.34
SUB1-204ENST00000504016 OTOGQ6ZRI0 2925 aa0.42□□□□□ -2.34
SUB1-204ENST00000504016 GVINP1Q7Z2Y8 2422 aa0.42□□□□□ -2.34
SUB1-204ENST00000504016 MAGI2Q86UL8 1455 aa0.41□□□□□ -2.34
SUB1-204ENST00000504016 LRRC37AA6NMS7 1700 aa0.41□□□□□ -2.34
SUB1-204ENST00000504016 SPTA1P02549 2419 aa0.41□□□□□ -2.34
SUB1-204ENST00000504016 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
SUB1-204ENST00000504016 SPRR1BP22528 89 aa0.41□□□□□ -2.34
SUB1-204ENST00000504016 COX7BP24311 80 aa0.41□□□□□ -2.34
SUB1-204ENST00000504016 SPRR1AP35321 89 aa0.41□□□□□ -2.34
SUB1-204ENST00000504016 TARBP1Q13395 1621 aaKnown RBP0.41□□□□□ -2.34
SUB1-204ENST00000504016 KIF14Q15058 1648 aa0.41□□□□□ -2.34
SUB1-204ENST00000504016 MAP3K4Q9Y6R4 1608 aa0.41□□□□□ -2.34
SUB1-204ENST00000504016 NKTRP30414 1462 aaKnown RBP0.41□□□□□ -2.34
SUB1-204ENST00000504016 RRBP1Q9P2E9 1410 aaKnown RBP0.4□□□□□ -2.34
SUB1-204ENST00000504016 ABCC1P33527 1531 aa0.4□□□□□ -2.35
SUB1-204ENST00000504016 LAMC1P11047 1609 aa0.4□□□□□ -2.35
SUB1-204ENST00000504016 A0A087WXM4 84 aa0.4□□□□□ -2.35
SUB1-204ENST00000504016 IFI27P40305 119 aaPredicted RBP0.4□□□□□ -2.35
SUB1-204ENST00000504016 COX6B2Q6YFQ2 88 aa0.4□□□□□ -2.35
SUB1-204ENST00000504016 WFDC9Q8NEX5 89 aa0.4□□□□□ -2.35
SUB1-204ENST00000504016 SUPT6HQ7KZ85 1726 aaKnown RBP0.4□□□□□ -2.35
SUB1-204ENST00000504016 MON2Q7Z3U7 1717 aa0.4□□□□□ -2.35
SUB1-204ENST00000504016 ARHGAP35Q9NRY4 1499 aa0.4□□□□□ -2.35
SUB1-204ENST00000504016 C5P01031 1676 aa0.4□□□□□ -2.35
SUB1-204ENST00000504016 RGPD3A6NKT7 1758 aaPredicted RBP0.4□□□□□ -2.35
SUB1-204ENST00000504016 PPLO60437 1756 aa0.4□□□□□ -2.35
SUB1-204ENST00000504016 URB2Q14146 1524 aaKnown RBP0.39□□□□□ -2.35
SUB1-204ENST00000504016 H3BUT2 72 aa0.39□□□□□ -2.35
SUB1-204ENST00000504016 DEFB121Q5J5C9 76 aa0.39□□□□□ -2.35
SUB1-204ENST00000504016 DEFB105AQ8NG35 78 aa0.39□□□□□ -2.35
SUB1-204ENST00000504016 FXYD6Q9H0Q3 95 aa0.39□□□□□ -2.35
SUB1-204ENST00000504016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.38□□□□□ -2.351e-8■■□□□ 11.6
SUB1-204ENST00000504016 KIAA0556O60303 1618 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 CRYBG1Q9Y4K1 1723 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 ATRQ13535 2644 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 CHD6Q8TD26 2715 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 TENM4Q6N022 2769 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 ERVK-7P63135 1459 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 TRAV21A0A0B4J279 112 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 UMAD1C9J7I0 102 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 SMIM13P0DJ93 91 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 BVES-AS1Q5T3Y7 98 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 MRPL34Q9BQ48 92 aaKnown RBP0.38□□□□□ -2.35
SUB1-204ENST00000504016 CDKN2A-AS1Q9UH64 79 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 ANKARQ7Z5J8 1434 aa0.38□□□□□ -2.35
SUB1-204ENST00000504016 UBR3Q6ZT12 1888 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 ABCA2Q9BZC7 2435 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 UBR5O95071 2799 aaPredicted RBP0.37□□□□□ -2.35
SUB1-204ENST00000504016 KRTAP2-3P0C7H8 128 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 HEPN1Q6WQI6 88 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 C18orf32Q8TCD1 76 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 KRTAP2-4Q9BYR9 128 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 KRTAP2-1Q9BYU5 128 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 APLNQ9ULZ1 77 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 NCOR2Q9Y618 2525 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 DCAF1Q9Y4B6 1507 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 CHD8Q9HCK8 2581 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 CSMD3Q7Z407 3707 aa0.37□□□□□ -2.35
SUB1-204ENST00000504016 KIF20BQ96Q89 1820 aa0.36□□□□□ -2.35
SUB1-204ENST00000504016 KDM5DQ9BY66 1539 aa0.36□□□□□ -2.35
SUB1-204ENST00000504016 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
SUB1-204ENST00000504016 ALKQ9UM73 1620 aa0.35□□□□□ -2.35
SUB1-204ENST00000504016 NCOR1O75376 2440 aa0.35□□□□□ -2.35
SUB1-204ENST00000504016 DMBT1Q9UGM3 2413 aaPredicted RBP0.35□□□□□ -2.35
SUB1-204ENST00000504016 PAPPA2Q9BXP8 1791 aa0.35□□□□□ -2.35
SUB1-204ENST00000504016 LRRC7Q96NW7 1537 aa0.35□□□□□ -2.35
SUB1-204ENST00000504016 ANKRD36A6QL64 1941 aa0.35□□□□□ -2.35
SUB1-204ENST00000504016 SMCO4Q9NRQ5 59 aa0.35□□□□□ -2.35
SUB1-204ENST00000504016 PKD1L1Q8TDX9 2849 aa0.35□□□□□ -2.35
SUB1-204ENST00000504016 PKD1L3Q7Z443 1732 aa0.35□□□□□ -2.35
SUB1-204ENST00000504016 CCDC88BA6NC98 1476 aa0.35□□□□□ -2.35
SUB1-204ENST00000504016 VWFP04275 2813 aa0.34□□□□□ -2.35
SUB1-204ENST00000504016 SLIT1O75093 1534 aa0.34□□□□□ -2.35
SUB1-204ENST00000504016 PPRC1Q5VV67 1664 aaKnown RBP0.34□□□□□ -2.35
SUB1-204ENST00000504016 HIVEP3Q5T1R4 2406 aa0.34□□□□□ -2.35
SUB1-204ENST00000504016 LOC730098B7Z3J9 87 aa0.34□□□□□ -2.36
SUB1-204ENST00000504016 PDCD5O14737 125 aa0.34□□□□□ -2.36
SUB1-204ENST00000504016 CNOT1A5YKK6 2376 aaKnown RBP0.34□□□□□ -2.36
SUB1-204ENST00000504016 NCOA2Q15596 1464 aa0.34□□□□□ -2.36
SUB1-204ENST00000504016 MAST4O15021 2626 aa0.34□□□□□ -2.36
SUB1-204ENST00000504016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.33□□□□□ -2.362e-6■■□□□ 13.6
SUB1-204ENST00000504016 WNK2Q9Y3S1 2297 aa0.33□□□□□ -2.36
SUB1-204ENST00000504016 C3orf79P0CE67 100 aa0.33□□□□□ -2.36
SUB1-204ENST00000504016 MDN1Q9NU22 5596 aa0.33□□□□□ -2.36
SUB1-204ENST00000504016 RGPD8O14715 1765 aaPredicted RBP0.32□□□□□ -2.36
SUB1-204ENST00000504016 COL14A1Q05707 1796 aaKnown RBP0.32□□□□□ -2.36
SUB1-204ENST00000504016 RGPD5Q99666 1765 aa0.32□□□□□ -2.36
SUB1-204ENST00000504016 ANKRD50Q9ULJ7 1429 aa0.32□□□□□ -2.36
SUB1-204ENST00000504016 PTPN23Q9H3S7 1636 aa0.32□□□□□ -2.36
SUB1-204ENST00000504016 MRPL33O75394 65 aaKnown RBP0.32□□□□□ -2.36
SUB1-204ENST00000504016 IFI6P09912 130 aa0.32□□□□□ -2.36
SUB1-204ENST00000504016 H1FX-AS1Q4G0G2 97 aa0.32□□□□□ -2.36
SUB1-204ENST00000504016 NSD1Q96L73 2696 aaPredicted RBP0.32□□□□□ -2.36
SUB1-204ENST00000504016 CSPG4Q6UVK1 2322 aa0.32□□□□□ -2.36
SUB1-204ENST00000504016 FLNAP21333 2647 aaKnown RBP0.32□□□□□ -2.36
SUB1-204ENST00000504016 CFAP74Q9C0B2 1584 aa0.32□□□□□ -2.36
SUB1-204ENST00000504016 SETXQ7Z333 2677 aaKnown RBP0.31□□□□□ -2.36
SUB1-204ENST00000504016 UBR1Q8IWV7 1749 aa0.31□□□□□ -2.36
SUB1-204ENST00000504016 NREPQ16612 68 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms