RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 KRTAP26-1Q6PEX3 210 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 ANKRD29Q8N6D5 301 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 GTSF1Q8WW33 167 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 PRELID3AQ96N28 172 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 C20orf78Q9BR46 151 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 PRO0461Q9UI25 63 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 PYGO1Q9Y3Y4 419 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 IGLV4-60A0A075B6I1 120 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 IGHV3-64A0A075B6Q5 118 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 IGHV1-24A0A0C4DH33 117 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 IGKV2-24A0A0C4DH68 120 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 LTAP01374 205 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 KRTDAPP60985 99 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 HIGD2BQ4VC39 106 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 LYRM7Q5U5X0 104 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 GAGE2AQ6NT46 116 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 C20orf203Q8NBC4 194 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 GFRA4Q9GZZ7 299 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 PRR34Q9NV39 138 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 TRAPPC1Q9Y5R8 145 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 KIF25-AS1Q9Y6Z4 181 aa3.47□□□□□ -1.85
SPTA1-209ENST00000498708 TRBV20-1A0A075B6N2 111 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.46□□□□□ -1.86
SPTA1-209ENST00000498708 A0A0J9YXV3 536 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 FAM240AA0A1B0GVK7 77 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 E9PLD3 99 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 H7C1H1 209 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 SERF1AO75920 110 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 C3orf79P0CE67 100 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 COX8AP10176 69 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 FOXA3P55318 350 aaPredicted RBP3.46□□□□□ -1.86
SPTA1-209ENST00000498708 COX6A2Q02221 97 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 ETDBQ3ZM63 59 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 TMEM136Q6ZRR5 245 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 COX8CQ7Z4L0 72 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 TEN1Q86WV5 123 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 BAGE2Q86Y30 109 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 PRR15Q8IV56 129 aa3.46□□□□□ -1.86
SPTA1-209ENST00000498708 TRBV7-6A0A0J9YX20 115 aa3.45□□□□□ -1.86
SPTA1-209ENST00000498708 FAM236AA0A1B0GUQ0 79 aa3.45□□□□□ -1.86
SPTA1-209ENST00000498708 FAM236BA0A1B0GV22 79 aa3.45□□□□□ -1.86
SPTA1-209ENST00000498708 UBE2L6O14933 153 aa3.45□□□□□ -1.86
SPTA1-209ENST00000498708 SMIM13P0DJ93 91 aa3.45□□□□□ -1.86
SPTA1-209ENST00000498708 COX7CP15954 63 aa3.45□□□□□ -1.86
SPTA1-209ENST00000498708 CNBPP62633 177 aaKnown RBP3.45□□□□□ -1.86
SPTA1-209ENST00000498708 FAM213BQ8TBF2 198 aa3.45□□□□□ -1.86
SPTA1-209ENST00000498708 SPACA4Q8TDM5 124 aa3.45□□□□□ -1.86
SPTA1-209ENST00000498708 C7orf33Q8WU49 177 aa3.45□□□□□ -1.86
SPTA1-209ENST00000498708 TMEM243Q9BU79 118 aa3.45□□□□□ -1.86
SPTA1-209ENST00000498708 TRAV13-1A0A0B4J241 112 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 TRAV8-4A0A0B4J246 113 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 A0A1B0GWB2 263 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 M0QY20 66 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 P01737 135 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 TRACP01848 142 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 FGF6P10767 208 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 SRSF9Q13242 221 aaKnown RBP eCLIP3.44□□□□□ -1.86
SPTA1-209ENST00000498708 CIRBPQ14011 172 aaKnown RBP3.44□□□□□ -1.86
SPTA1-209ENST00000498708 LINC01545Q5VT33 79 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 C2orf91Q6ZV80 131 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 BAGE3Q86Y29 109 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 C15orf56Q8N910 161 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 HIGD1BQ9P298 99 aa3.44□□□□□ -1.86
SPTA1-209ENST00000498708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.43□□□□□ -1.86
SPTA1-209ENST00000498708 A0A096LNI7 61 aa3.43□□□□□ -1.86
SPTA1-209ENST00000498708 SMIM26A0A096LP01 95 aa3.43□□□□□ -1.86
SPTA1-209ENST00000498708 IGKV2-29A2NJV5 120 aaPredicted RBP3.43□□□□□ -1.86
SPTA1-209ENST00000498708 NUPR1O60356 82 aa3.43□□□□□ -1.86
SPTA1-209ENST00000498708 RNF185Q96GF1 192 aa3.43□□□□□ -1.86
SPTA1-209ENST00000498708 CARD19Q96LW7 228 aa3.43□□□□□ -1.86
SPTA1-209ENST00000498708 PLAC8Q9NZF1 115 aa3.43□□□□□ -1.86
SPTA1-209ENST00000498708 SERP1Q9Y6X1 66 aa3.43□□□□□ -1.86
SPTA1-209ENST00000498708 SMKR1H3BMG3 65 aa3.42□□□□□ -1.86
SPTA1-209ENST00000498708 ATOX1O00244 68 aa3.42□□□□□ -1.86
SPTA1-209ENST00000498708 APCSP02743 223 aa3.42□□□□□ -1.86
SPTA1-209ENST00000498708 CCL20P78556 96 aa3.42□□□□□ -1.86
SPTA1-209ENST00000498708 PRR3P79522 188 aaKnown RBP3.42□□□□□ -1.86
SPTA1-209ENST00000498708 MRPS36P82909 103 aaKnown RBP3.42□□□□□ -1.86
SPTA1-209ENST00000498708 CENPWQ5EE01 88 aa3.42□□□□□ -1.86
SPTA1-209ENST00000498708 LYZL1Q6UWQ5 148 aa3.42□□□□□ -1.86
SPTA1-209ENST00000498708 PRR26Q8N8Z3 221 aa3.42□□□□□ -1.86
SPTA1-209ENST00000498708 CHCHD10Q8WYQ3 142 aaPredicted RBP3.42□□□□□ -1.86
SPTA1-209ENST00000498708 GNB1LQ9BYB4 327 aa3.42□□□□□ -1.86
SPTA1-209ENST00000498708 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
SPTA1-209ENST00000498708 A0A1B0GUV1 79 aa3.41□□□□□ -1.86
SPTA1-209ENST00000498708 VCYO14598 125 aa3.41□□□□□ -1.86
SPTA1-209ENST00000498708 CXCL5P42830 114 aa3.41□□□□□ -1.86
SPTA1-209ENST00000498708 CACNG7P62955 275 aa3.41□□□□□ -1.86
SPTA1-209ENST00000498708 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
SPTA1-209ENST00000498708 SCGB1D4Q6XE38 83 aa3.41□□□□□ -1.86
SPTA1-209ENST00000498708 RPL39LQ96EH5 51 aaKnown RBP3.41□□□□□ -1.86
SPTA1-209ENST00000498708 GNG13Q9P2W3 67 aa3.41□□□□□ -1.86
SPTA1-209ENST00000498708 IGLV5-39A0A0G2JS06 123 aa3.4□□□□□ -1.87
SPTA1-209ENST00000498708 C19orf71A6NCJ1 209 aa3.4□□□□□ -1.87
SPTA1-209ENST00000498708 A8MWL6 223 aa3.4□□□□□ -1.87
SPTA1-209ENST00000498708 MT3P25713 68 aa3.4□□□□□ -1.87
SPTA1-209ENST00000498708 XCL1P47992 114 aa3.4□□□□□ -1.87
SPTA1-209ENST00000498708 ATP5EP56381 51 aaPredicted RBP3.4□□□□□ -1.87
SPTA1-209ENST00000498708 NPC2P61916 151 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms