RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 AKAP9Q99996 3911 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 A6NED7 52 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 GNRH2O43555 120 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 PDE6GP18545 87 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 LINC00158P58513 81 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 PRR9Q5T870 116 aa1.72□□□□□ -2.13
UBXN4-208ENST00000490163 CACNA1AO00555 2505 aa1.71□□□□□ -2.13
UBXN4-208ENST00000490163 SPTBN1Q01082 2364 aaKnown RBP1.71□□□□□ -2.14
UBXN4-208ENST00000490163 HCG22E2RYF7 251 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 CTSGP08311 255 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 RNASE3P12724 160 aaKnown RBP1.71□□□□□ -2.14
UBXN4-208ENST00000490163 C14orf177Q52M58 125 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 SCXQ7RTU7 201 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 CNEP1R1Q8N9A8 125 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 ROS1P08922 2347 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 AKAP13Q12802 2813 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 APC2O95996 2303 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 VPS13AQ96RL7 3174 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 M0QY20 66 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 IGKV3-15P01624 115 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 LINC00315P59091 139 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 DEFB109BQ30KR1 87 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 LUZP6Q538Z0 58 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 KPRPQ5T749 579 aaPredicted RBP1.71□□□□□ -2.14
UBXN4-208ENST00000490163 C1orf64Q8NEQ6 169 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 DIRC1Q969H9 104 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 PRR15LQ9BU68 103 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 DCHS1Q96JQ0 3298 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 DMXL1Q9Y485 3027 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 CACNA1BQ00975 2339 aa1.71□□□□□ -2.14
UBXN4-208ENST00000490163 Q6ZTI0 123 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 LIMD2Q9BT23 127 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 HIGD2AQ9BW72 106 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 TOMM7Q9P0U1 55 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 CUL9Q8IWT3 2517 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 LAMA1P25391 3075 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 ANK3Q12955 4377 aaKnown RBP1.7□□□□□ -2.14
UBXN4-208ENST00000490163 MED13LQ71F56 2210 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 PKDREJQ9NTG1 2253 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 TRBV6-8A0A0A6YYG3 113 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 PRB2P02812 416 aaPredicted RBP1.7□□□□□ -2.14
UBXN4-208ENST00000490163 CYP4F30PQ9H0H9 118 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 FRYQ5TBA9 3013 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 MUC4Q99102 2169 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.7□□□□□ -2.14
UBXN4-208ENST00000490163 COX7B2Q8TF08 81 aa1.7□□□□□ -2.14
UBXN4-208ENST00000490163 UBR5O95071 2799 aaPredicted RBP1.69□□□□□ -2.14
UBXN4-208ENST00000490163 DNAH3Q8TD57 4116 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 PCNX1Q96RV3 2341 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 IGLV3-9A0A075B6K5 115 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 LOC110117498A0A087WWA1 95 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 A0A096LNT2 108 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 CLPSL1A2RUU4 121 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 PSCAO43653 123 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 IGKV3-20P01619 116 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 Q5VV11 94 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 Q6ZQT0 140 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 ITLN2Q8WWU7 325 aaPredicted RBP1.69□□□□□ -2.14
UBXN4-208ENST00000490163 CR1P17927 2039 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 ITPR1Q14643 2758 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 A0A1B0GVY2 172 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 A6NN06 94 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 H3BQ85 93 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 CCL18P55774 89 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 Q8N814 137 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 LINC01560Q8TB33 94 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 KLK9Q9UKQ9 250 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 WDFY4Q6ZS81 3184 aa1.69□□□□□ -2.14
UBXN4-208ENST00000490163 IGKV2-28A0A075B6P5 120 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 NDUFB1O75438 58 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 IGKV2D-28P01615 120 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 LINC01554Q52M75 96 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 KRTAP11-1Q8IUC1 163 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 LINC00167Q96N53 147 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 LINC00467Q9BRT7 94 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 CMYA5Q8N3K9 4069 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 MAP1BP46821 2468 aaKnown RBP1.68□□□□□ -2.14
UBXN4-208ENST00000490163 IGKV3-7A0A075B6H7 116 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 IGHV3-73A0A0B4J1V6 119 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 KRTAP13-2Q52LG2 175 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 CASC2Q6XLA1 102 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 ZNF706Q9Y5V0 76 aaPredicted RBP1.68□□□□□ -2.14
UBXN4-208ENST00000490163 ANK2Q01484 3957 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 TRBV6-4A0A1B0GX49 114 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 A8MU10 97 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 DSCR10P59022 87 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 KRTAP21-3Q3LHN1 58 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 CDC42SE1Q9NRR8 79 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 AKAP6Q13023 2319 aa1.68□□□□□ -2.14
UBXN4-208ENST00000490163 LY6HO94772 140 aa1.67□□□□□ -2.14
UBXN4-208ENST00000490163 DEFB1P60022 68 aa1.67□□□□□ -2.14
UBXN4-208ENST00000490163 COX6A2Q02221 97 aa1.67□□□□□ -2.14
UBXN4-208ENST00000490163 C9orf116Q5BN46 136 aaPredicted RBP1.67□□□□□ -2.14
UBXN4-208ENST00000490163 CELA1Q9UNI1 258 aa1.67□□□□□ -2.14
UBXN4-208ENST00000490163 SPTBN2O15020 2390 aa1.67□□□□□ -2.14
UBXN4-208ENST00000490163 CACNA1HO95180 2353 aa1.67□□□□□ -2.14
UBXN4-208ENST00000490163 LINC00208Q96KT6 92 aa1.67□□□□□ -2.14
UBXN4-208ENST00000490163 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.67□□□□□ -2.141e-6■■■□□ 15.3
UBXN4-208ENST00000490163 PRM2P04554 102 aa1.67□□□□□ -2.14
UBXN4-208ENST00000490163 Q8N9L7 120 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms