RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 SVBPQ8N300 66 aa3.57□□□□□ -1.84
CDHR3-213ENST00000488386 GEMIN7Q9H840 131 aaKnown RBP3.57□□□□□ -1.84
CDHR3-213ENST00000488386 F8WDY8 70 aa3.56□□□□□ -1.84
CDHR3-213ENST00000488386 SNAPINO95295 136 aa3.56□□□□□ -1.84
CDHR3-213ENST00000488386 S100PP25815 95 aa3.56□□□□□ -1.84
CDHR3-213ENST00000488386 RAB5BP61020 215 aa3.56□□□□□ -1.84
CDHR3-213ENST00000488386 FAM19A3Q7Z5A8 133 aa3.56□□□□□ -1.84
CDHR3-213ENST00000488386 Q8IZM0 81 aa3.56□□□□□ -1.84
CDHR3-213ENST00000488386 TIMM17AQ99595 171 aa3.56□□□□□ -1.84
CDHR3-213ENST00000488386 A0A096LNJ9 63 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 LINC01549A6NIU2 74 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 SCO1O75880 301 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 NDUFA6P56556 154 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 HERVK_113P63121 156 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 FA2HQ7L5A8 372 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 ERASQ7Z444 233 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 LINC01561Q8N1V8 128 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 GNB1LQ9BYB4 327 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 CST9LQ9H4G1 147 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 SMCO4Q9NRQ5 59 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 C22orf24Q9Y442 160 aa3.55□□□□□ -1.84
CDHR3-213ENST00000488386 LINC01546A6NGU7 62 aa3.54□□□□□ -1.84
CDHR3-213ENST00000488386 RPL37AP8A6NKH3 93 aa3.54□□□□□ -1.84
CDHR3-213ENST00000488386 F8VRH5 84 aa3.54□□□□□ -1.84
CDHR3-213ENST00000488386 H0Y9J4 135 aa3.54□□□□□ -1.84
CDHR3-213ENST00000488386 APOC3P02656 99 aa3.54□□□□□ -1.84
CDHR3-213ENST00000488386 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
CDHR3-213ENST00000488386 C18orf32Q8TCD1 76 aa3.54□□□□□ -1.84
CDHR3-213ENST00000488386 COX7B2Q8TF08 81 aa3.54□□□□□ -1.84
CDHR3-213ENST00000488386 TRAPPC1Q9Y5R8 145 aa3.54□□□□□ -1.84
CDHR3-213ENST00000488386 TINCRA0A1B0GVN0 87 aa3.53□□□□□ -1.84
CDHR3-213ENST00000488386 SEC11AP67812 179 aa3.53□□□□□ -1.84
CDHR3-213ENST00000488386 PMVKQ15126 192 aa3.53□□□□□ -1.84
CDHR3-213ENST00000488386 ADAMTSL4-AS1Q5T5F5 129 aa3.53□□□□□ -1.84
CDHR3-213ENST00000488386 DIRC1Q969H9 104 aa3.53□□□□□ -1.84
CDHR3-213ENST00000488386 ZNF625Q96I27 306 aaPredicted RBP3.53□□□□□ -1.84
CDHR3-213ENST00000488386 RNF213Q63HN8 5207 aa3.52□□□□□ -1.85
CDHR3-213ENST00000488386 ZNF22P17026 224 aaPredicted RBP3.52□□□□□ -1.85
CDHR3-213ENST00000488386 G0S2P27469 103 aa3.52□□□□□ -1.85
CDHR3-213ENST00000488386 PFN2P35080 140 aa3.52□□□□□ -1.85
CDHR3-213ENST00000488386 PDZD11Q5EBL8 140 aa3.52□□□□□ -1.85
CDHR3-213ENST00000488386 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
CDHR3-213ENST00000488386 LINC00167Q96N53 147 aa3.52□□□□□ -1.85
CDHR3-213ENST00000488386 ANAPC11Q9NYG5 84 aa3.52□□□□□ -1.85
CDHR3-213ENST00000488386 C11orf86A6NJI1 115 aa3.51□□□□□ -1.85
CDHR3-213ENST00000488386 HBDP02042 147 aa3.51□□□□□ -1.85
CDHR3-213ENST00000488386 LINC00614P0C842 121 aa3.51□□□□□ -1.85
CDHR3-213ENST00000488386 IGLC3P0DOY3 106 aa3.51□□□□□ -1.85
CDHR3-213ENST00000488386 CXCL5P42830 114 aa3.51□□□□□ -1.85
CDHR3-213ENST00000488386 MRPL55Q7Z7F7 128 aaKnown RBP3.51□□□□□ -1.85
CDHR3-213ENST00000488386 Q8NDZ9 215 aa3.51□□□□□ -1.85
CDHR3-213ENST00000488386 IGKV2-28A0A075B6P5 120 aa3.5□□□□□ -1.85
CDHR3-213ENST00000488386 A0A0U1RRA0 63 aa3.5□□□□□ -1.85
CDHR3-213ENST00000488386 ZNF861PO60384 105 aa3.5□□□□□ -1.85
CDHR3-213ENST00000488386 IGKV2D-28P01615 120 aa3.5□□□□□ -1.85
CDHR3-213ENST00000488386 BAGE3Q86Y29 109 aa3.5□□□□□ -1.85
CDHR3-213ENST00000488386 CBLN2Q8IUK8 224 aa3.5□□□□□ -1.85
CDHR3-213ENST00000488386 YPEL4Q96NS1 127 aa3.5□□□□□ -1.85
CDHR3-213ENST00000488386 TMEM238C9JI98 176 aa3.49□□□□□ -1.85
CDHR3-213ENST00000488386 H3BRM9 83 aa3.49□□□□□ -1.85
CDHR3-213ENST00000488386 NUPR1O60356 82 aa3.49□□□□□ -1.85
CDHR3-213ENST00000488386 BCE1O60756 84 aa3.49□□□□□ -1.85
CDHR3-213ENST00000488386 ATP5LO75964 103 aa3.49□□□□□ -1.85
CDHR3-213ENST00000488386 TSPAN13O95857 204 aa3.49□□□□□ -1.85
CDHR3-213ENST00000488386 PRLHP81277 87 aa3.49□□□□□ -1.85
CDHR3-213ENST00000488386 LBHQ53QV2 105 aaPredicted RBP3.49□□□□□ -1.85
CDHR3-213ENST00000488386 TMEM170BQ5T4T1 132 aa3.49□□□□□ -1.85
CDHR3-213ENST00000488386 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
CDHR3-213ENST00000488386 FAM19A2Q8N3H0 131 aa3.49□□□□□ -1.85
CDHR3-213ENST00000488386 IGLV1-50A0A075B6I6 118 aa3.48□□□□□ -1.85
CDHR3-213ENST00000488386 H0Y8G0 127 aa3.48□□□□□ -1.85
CDHR3-213ENST00000488386 NKAPP1Q8N9T2 125 aa3.48□□□□□ -1.85
CDHR3-213ENST00000488386 SND1-IT1Q9HBX3 110 aa3.48□□□□□ -1.85
CDHR3-213ENST00000488386 TP73-AS1Q9UF72 201 aa3.48□□□□□ -1.85
CDHR3-213ENST00000488386 ERG28Q9UKR5 140 aa3.48□□□□□ -1.85
CDHR3-213ENST00000488386 CHTOPQ9Y3Y2 248 aaKnown RBP3.48□□□□□ -1.85
CDHR3-213ENST00000488386 UBE2AP49459 152 aa3.47□□□□□ -1.85
CDHR3-213ENST00000488386 PRR4Q16378 134 aa3.47□□□□□ -1.85
CDHR3-213ENST00000488386 FAM19A1Q7Z5A9 133 aa3.47□□□□□ -1.85
CDHR3-213ENST00000488386 SLC7A5P1Q8MH63 180 aa3.47□□□□□ -1.85
CDHR3-213ENST00000488386 IFI27L1Q96BM0 104 aa3.47□□□□□ -1.85
CDHR3-213ENST00000488386 TMEM223A0PJW6 202 aa3.46□□□□□ -1.86
CDHR3-213ENST00000488386 KRTAP16-1A8MUX0 517 aa3.46□□□□□ -1.86
CDHR3-213ENST00000488386 TRGC2P03986 189 aa3.46□□□□□ -1.86
CDHR3-213ENST00000488386 SMIM13P0DJ93 91 aa3.46□□□□□ -1.86
CDHR3-213ENST00000488386 RPL28P46779 137 aaKnown RBP3.46□□□□□ -1.86
CDHR3-213ENST00000488386 LINC00158P58513 81 aa3.46□□□□□ -1.86
CDHR3-213ENST00000488386 KRTAP13-2Q52LG2 175 aa3.46□□□□□ -1.86
CDHR3-213ENST00000488386 PET117Q6UWS5 81 aa3.46□□□□□ -1.86
CDHR3-213ENST00000488386 KRTAP13-1Q8IUC0 172 aa3.46□□□□□ -1.86
CDHR3-213ENST00000488386 RETNLBQ9BQ08 111 aa3.46□□□□□ -1.86
CDHR3-213ENST00000488386 PMCHL2Q9BQD1 86 aa3.46□□□□□ -1.86
CDHR3-213ENST00000488386 M0R378 163 aa3.45□□□□□ -1.86
CDHR3-213ENST00000488386 NCR3O14931 201 aa3.45□□□□□ -1.86
CDHR3-213ENST00000488386 HSBP1O75506 76 aa3.45□□□□□ -1.86
CDHR3-213ENST00000488386 S100A1P23297 94 aa3.45□□□□□ -1.86
CDHR3-213ENST00000488386 TSPEAR-AS2P59090 65 aa3.45□□□□□ -1.86
CDHR3-213ENST00000488386 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
CDHR3-213ENST00000488386 TYMSOSQ8TAI1 123 aa3.45□□□□□ -1.86
CDHR3-213ENST00000488386 CHCHD1Q96BP2 118 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 2902.3 ms