RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 CARD19Q96LW7 228 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 LINC01600Q96MT4 127 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 GAGE2DQ9UEU5 116 aa4.29□□□□□ -1.72
HDAC1-205ENST00000472928 TRBV20-1A0A075B6N2 111 aa4.28□□□□□ -1.72
HDAC1-205ENST00000472928 USP17L23D6RBM5 183 aa4.28□□□□□ -1.72
HDAC1-205ENST00000472928 CRPP02741 224 aa4.28□□□□□ -1.72
HDAC1-205ENST00000472928 IFITM1P13164 125 aa4.28□□□□□ -1.72
HDAC1-205ENST00000472928 CCL18P55774 89 aa4.28□□□□□ -1.72
HDAC1-205ENST00000472928 HERVK_113P63121 156 aa4.28□□□□□ -1.72
HDAC1-205ENST00000472928 TTC32Q5I0X7 151 aa4.28□□□□□ -1.72
HDAC1-205ENST00000472928 LINC00269Q8N2A0 174 aa4.28□□□□□ -1.72
HDAC1-205ENST00000472928 KRTAP1-5Q9BYS1 174 aa4.28□□□□□ -1.72
HDAC1-205ENST00000472928 LINC00588Q9Y4M8 146 aa4.28□□□□□ -1.72
HDAC1-205ENST00000472928 DNAH8Q96JB1 4490 aa4.28□□□□□ -1.72
HDAC1-205ENST00000472928 IGHV3-64A0A075B6Q5 118 aa4.27□□□□□ -1.73
HDAC1-205ENST00000472928 IGLV5-45A0A087WSX0 123 aa4.27□□□□□ -1.73
HDAC1-205ENST00000472928 IGKV2D-26A0A0A0MRZ7 120 aa4.27□□□□□ -1.73
HDAC1-205ENST00000472928 LINC00959A0A1B0GUT2 108 aa4.27□□□□□ -1.73
HDAC1-205ENST00000472928 TMEM223A0PJW6 202 aa4.27□□□□□ -1.73
HDAC1-205ENST00000472928 REG3AQ06141 175 aa4.27□□□□□ -1.73
HDAC1-205ENST00000472928 LINC01556Q5JQF7 62 aa4.27□□□□□ -1.73
HDAC1-205ENST00000472928 LINC00242Q5T6M2 205 aa4.27□□□□□ -1.73
HDAC1-205ENST00000472928 FAM19A3Q7Z5A8 133 aa4.27□□□□□ -1.73
HDAC1-205ENST00000472928 KLK12Q9UKR0 248 aa4.27□□□□□ -1.73
HDAC1-205ENST00000472928 FAT3Q8TDW7 4589 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 IGLV10-54A0A075B6I4 117 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 MYMXA0A1B0GTQ4 84 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 CCDC179H3BU77 68 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 SNCGO76070 127 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 XCL1P47992 114 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 TSPEAR-AS2P59090 65 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 COX6A2Q02221 97 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 SS18Q15532 418 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 UBE2WQ96B02 151 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 HIST1H4GQ99525 98 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 TTTY13Q9BZ97 58 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 CDKN2A-AS1Q9UH64 79 aa4.26□□□□□ -1.73
HDAC1-205ENST00000472928 TRAV8-3A0A0A6YYJ7 113 aa4.25□□□□□ -1.73
HDAC1-205ENST00000472928 SMIM1B2RUZ4 78 aa4.25□□□□□ -1.73
HDAC1-205ENST00000472928 LEPROTO15243 131 aa4.25□□□□□ -1.73
HDAC1-205ENST00000472928 DNAH10OSP0CZ25 163 aa4.25□□□□□ -1.73
HDAC1-205ENST00000472928 LGALS3P17931 250 aaKnown RBP4.25□□□□□ -1.73
HDAC1-205ENST00000472928 FUSP35637 526 aaKnown RBP eCLIP4.25□□□□□ -1.73
HDAC1-205ENST00000472928 CHCHD10Q8WYQ3 142 aaPredicted RBP4.25□□□□□ -1.73
HDAC1-205ENST00000472928 PLEKHB2Q96CS7 222 aa4.25□□□□□ -1.73
HDAC1-205ENST00000472928 UPK3BQ9BT76 320 aa4.25□□□□□ -1.73
HDAC1-205ENST00000472928 PRR34Q9NV39 138 aa4.25□□□□□ -1.73
HDAC1-205ENST00000472928 ZNF815PA8K554 130 aa4.24□□□□□ -1.73
HDAC1-205ENST00000472928 J3QQQ9 107 aa4.24□□□□□ -1.73
HDAC1-205ENST00000472928 SCGB1C2P0DMR2 95 aa4.24□□□□□ -1.73
HDAC1-205ENST00000472928 PSMB2P49721 201 aa4.24□□□□□ -1.73
HDAC1-205ENST00000472928 KRTAP10-1P60331 282 aa4.24□□□□□ -1.73
HDAC1-205ENST00000472928 MEIG1Q5JSS6 88 aa4.24□□□□□ -1.73
HDAC1-205ENST00000472928 ENHOQ6UWT2 76 aa4.24□□□□□ -1.73
HDAC1-205ENST00000472928 C5orf38Q86SI9 138 aa4.24□□□□□ -1.73
HDAC1-205ENST00000472928 Q9HAA7 133 aa4.24□□□□□ -1.73
HDAC1-205ENST00000472928 A0A087WZ39 114 aa4.23□□□□□ -1.73
HDAC1-205ENST00000472928 IGHV3OR16-9A0A0B4J2B5 98 aa4.23□□□□□ -1.73
HDAC1-205ENST00000472928 IGHV1-58A0A0C4DH39 117 aa4.23□□□□□ -1.73
HDAC1-205ENST00000472928 IGLV5-39A0A0G2JS06 123 aa4.23□□□□□ -1.73
HDAC1-205ENST00000472928 A0A1B0GX51 115 aa4.23□□□□□ -1.73
HDAC1-205ENST00000472928 COX7A2LO14548 114 aa4.23□□□□□ -1.73
HDAC1-205ENST00000472928 SMR3BP02814 79 aaPredicted RBP4.23□□□□□ -1.73
HDAC1-205ENST00000472928 SLPIP03973 132 aa4.23□□□□□ -1.73
HDAC1-205ENST00000472928 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
HDAC1-205ENST00000472928 MIAQ16674 131 aa4.23□□□□□ -1.73
HDAC1-205ENST00000472928 CD164L2Q6UWJ8 174 aa4.23□□□□□ -1.73
HDAC1-205ENST00000472928 Q6ZRN7 208 aaPredicted RBP4.23□□□□□ -1.73
HDAC1-205ENST00000472928 C10orf126Q8N4M7 172 aa4.23□□□□□ -1.73
HDAC1-205ENST00000472928 LRP2P98164 4655 aa4.22□□□□□ -1.73
HDAC1-205ENST00000472928 IGKV2D-24A0A075B6R9 120 aa4.22□□□□□ -1.73
HDAC1-205ENST00000472928 TRAV8-4A0A0B4J246 113 aa4.22□□□□□ -1.73
HDAC1-205ENST00000472928 KRTAP29-1A8MX34 341 aaPredicted RBP4.22□□□□□ -1.73
HDAC1-205ENST00000472928 RPL13AP40429 203 aaKnown RBP4.22□□□□□ -1.73
HDAC1-205ENST00000472928 ANKRD29Q8N6D5 301 aa4.22□□□□□ -1.73
HDAC1-205ENST00000472928 COX7B2Q8TF08 81 aa4.22□□□□□ -1.73
HDAC1-205ENST00000472928 PPDPFQ9H3Y8 114 aa4.22□□□□□ -1.73
HDAC1-205ENST00000472928 Q9H8V8 135 aa4.22□□□□□ -1.73
HDAC1-205ENST00000472928 TOMM7Q9P0U1 55 aa4.22□□□□□ -1.73
HDAC1-205ENST00000472928 NDUFA12Q9UI09 145 aa4.22□□□□□ -1.73
HDAC1-205ENST00000472928 RNF213Q63HN8 5207 aa4.22□□□□□ -1.73
HDAC1-205ENST00000472928 PKHD1L1Q86WI1 4243 aa4.22□□□□□ -1.73
HDAC1-205ENST00000472928 IBA57-AS1B1ANH7 110 aa4.21□□□□□ -1.74
HDAC1-205ENST00000472928 TCL1BO95988 128 aa4.21□□□□□ -1.74
HDAC1-205ENST00000472928 SCGB1D4Q6XE38 83 aa4.21□□□□□ -1.74
HDAC1-205ENST00000472928 LINC01561Q8N1V8 128 aa4.21□□□□□ -1.74
HDAC1-205ENST00000472928 RMI2Q96E14 147 aa4.21□□□□□ -1.74
HDAC1-205ENST00000472928 IMUPQ9GZP8 106 aa4.21□□□□□ -1.74
HDAC1-205ENST00000472928 LOC107984156A0A0G2JMH3 177 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 TRBV7-7A0A0K0K1E9 115 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 FAM240AA0A1B0GVK7 77 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 J3KT08 172 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 NDUFA1O15239 70 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 SLC25A20O43772 301 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 PRSS2P07478 247 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 HAMPP81172 84 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 SPAG11BQ08648 103 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 ARL17AQ8IVW1 177 aa4.2□□□□□ -1.74
HDAC1-205ENST00000472928 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms