RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 TRAV30A0A087WSZ9 112 aa-0.47□□□□□ -2.48
COPS3-206ENST00000471414 ATOX1O00244 68 aa-0.47□□□□□ -2.48
COPS3-206ENST00000471414 ARMS2P0C7Q2 107 aa-0.47□□□□□ -2.48
COPS3-206ENST00000471414 S100A10P60903 97 aa-0.47□□□□□ -2.48
COPS3-206ENST00000471414 AP4S1Q9Y587 144 aa-0.47□□□□□ -2.48
COPS3-206ENST00000471414 CNOT1A5YKK6 2376 aaKnown RBP-0.47□□□□□ -2.49
COPS3-206ENST00000471414 FYCO1Q9BQS8 1478 aa-0.48□□□□□ -2.49
COPS3-206ENST00000471414 DEFB135Q30KP9 77 aa-0.48□□□□□ -2.49
COPS3-206ENST00000471414 SERP2Q8N6R1 65 aa-0.48□□□□□ -2.49
COPS3-206ENST00000471414 NRXN1Q9ULB1 1477 aa-0.48□□□□□ -2.49
COPS3-206ENST00000471414 SAMD9Q5K651 1589 aa-0.49□□□□□ -2.49
COPS3-206ENST00000471414 CLTCQ00610 1675 aaKnown RBP-0.49□□□□□ -2.49
COPS3-206ENST00000471414 CRYBG1Q9Y4K1 1723 aa-0.49□□□□□ -2.49
COPS3-206ENST00000471414 MRPL34Q9BQ48 92 aaKnown RBP-0.49□□□□□ -2.49
COPS3-206ENST00000471414 PDZD2O15018 2839 aa-0.49□□□□□ -2.49
COPS3-206ENST00000471414 MAP1AP78559 2803 aaPredicted RBP-0.49□□□□□ -2.49
COPS3-206ENST00000471414 TEX14Q8IWB6 1497 aa-0.49□□□□□ -2.49
COPS3-206ENST00000471414 PCNX1Q96RV3 2341 aa-0.49□□□□□ -2.49
COPS3-206ENST00000471414 PKHD1P08F94 4074 aa-0.49□□□□□ -2.49
COPS3-206ENST00000471414 RGPD2P0DJD1 1756 aa-0.5□□□□□ -2.49
COPS3-206ENST00000471414 BCORQ6W2J9 1755 aa-0.5□□□□□ -2.49
COPS3-206ENST00000471414 CCL22O00626 93 aa-0.5□□□□□ -2.49
COPS3-206ENST00000471414 SPRR2AP35326 72 aa-0.5□□□□□ -2.49
COPS3-206ENST00000471414 FLGP20930 4061 aaPredicted RBP-0.5□□□□□ -2.49
COPS3-206ENST00000471414 CNTLNQ9NXG0 1405 aa-0.5□□□□□ -2.49
COPS3-206ENST00000471414 TRBV7-7A0A0K0K1E9 115 aa-0.51□□□□□ -2.49
COPS3-206ENST00000471414 SPTY2D1-AS1A0A0U1RR47 76 aa-0.51□□□□□ -2.49
COPS3-206ENST00000471414 ATP6V1G2-DDX39BF2Z307 99 aa-0.51□□□□□ -2.49
COPS3-206ENST00000471414 LINC00032P0C843 101 aa-0.51□□□□□ -2.49
COPS3-206ENST00000471414 RBP2P50120 134 aa-0.51□□□□□ -2.49
COPS3-206ENST00000471414 HMGN3Q15651 99 aa-0.51□□□□□ -2.49
COPS3-206ENST00000471414 PKD1L3Q7Z443 1732 aa-0.51□□□□□ -2.49
COPS3-206ENST00000471414 C9orf62Q8N4C0 152 aa-0.51□□□□□ -2.49
COPS3-206ENST00000471414 MYH4Q9Y623 1939 aa-0.51□□□□□ -2.49
COPS3-206ENST00000471414 PCLOQ9Y6V0 5065 aa-0.51□□□□□ -2.49
COPS3-206ENST00000471414 KRTAP6-2Q3LI66 62 aa-0.52□□□□□ -2.49
COPS3-206ENST00000471414 ETDBQ3ZM63 59 aa-0.52□□□□□ -2.49
COPS3-206ENST00000471414 COL5A1-AS1Q5SY13 56 aa-0.52□□□□□ -2.49
COPS3-206ENST00000471414 ALKAL2Q6UX46 152 aa-0.52□□□□□ -2.49
COPS3-206ENST00000471414 SVEP1Q4LDE5 3571 aa-0.52□□□□□ -2.49
COPS3-206ENST00000471414 QSER1Q2KHR3 1735 aa-0.52□□□□□ -2.49
COPS3-206ENST00000471414 KMT2CQ8NEZ4 4911 aaKnown RBP-0.53□□□□□ -2.49
COPS3-206ENST00000471414 CLIP1P30622 1438 aa-0.53□□□□□ -2.49
COPS3-206ENST00000471414 UQCRHLA0A096LP55 91 aa-0.53□□□□□ -2.49
COPS3-206ENST00000471414 HEPN1Q6WQI6 88 aa-0.53□□□□□ -2.49
COPS3-206ENST00000471414 ZNF720Q7Z2F6 126 aa-0.53□□□□□ -2.49
COPS3-206ENST00000471414 ACBD7Q8N6N7 88 aa-0.53□□□□□ -2.49
COPS3-206ENST00000471414 DPY30Q9C005 99 aa-0.53□□□□□ -2.49
COPS3-206ENST00000471414 EPRSP07814 1512 aaKnown RBP-0.54□□□□□ -2.5
COPS3-206ENST00000471414 ANKRD26Q9UPS8 1709 aa-0.54□□□□□ -2.5
COPS3-206ENST00000471414 D6R8Y8 96 aa-0.54□□□□□ -2.5
COPS3-206ENST00000471414 F8WEM9 126 aa-0.54□□□□□ -2.5
COPS3-206ENST00000471414 LEPROTL1O95214 131 aa-0.54□□□□□ -2.5
COPS3-206ENST00000471414 FAUP35544 74 aaKnown RBP-0.54□□□□□ -2.5
COPS3-206ENST00000471414 LELP1Q5T871 98 aa-0.54□□□□□ -2.5
COPS3-206ENST00000471414 MUSTN1Q8IVN3 82 aa-0.54□□□□□ -2.5
COPS3-206ENST00000471414 PSENENQ9NZ42 101 aa-0.54□□□□□ -2.5
COPS3-206ENST00000471414 CDKN2A-AS1Q9UH64 79 aa-0.54□□□□□ -2.5
COPS3-206ENST00000471414 NBEAL1Q6ZS30 2694 aa-0.54□□□□□ -2.5
COPS3-206ENST00000471414 STAB2Q8WWQ8 2551 aa-0.54□□□□□ -2.5
COPS3-206ENST00000471414 ALKQ9UM73 1620 aa-0.55□□□□□ -2.5
COPS3-206ENST00000471414 SETD2Q9BYW2 2564 aaPredicted RBP-0.55□□□□□ -2.5
COPS3-206ENST00000471414 IGLC2P0DOY2 106 aa-0.55□□□□□ -2.5
COPS3-206ENST00000471414 IGLC3P0DOY3 106 aa-0.55□□□□□ -2.5
COPS3-206ENST00000471414 DEFB112Q30KQ8 113 aa-0.55□□□□□ -2.5
COPS3-206ENST00000471414 UBR3Q6ZT12 1888 aa-0.55□□□□□ -2.5
COPS3-206ENST00000471414 FANCAO15360 1455 aa-0.55□□□□□ -2.5
COPS3-206ENST00000471414 PTPN23Q9H3S7 1636 aa-0.56□□□□□ -2.5
COPS3-206ENST00000471414 ADAMTS12P58397 1594 aa-0.56□□□□□ -2.5
COPS3-206ENST00000471414 NCMAPQ5T1S8 102 aa-0.56□□□□□ -2.5
COPS3-206ENST00000471414 HIGD1BQ9P298 99 aa-0.56□□□□□ -2.5
COPS3-206ENST00000471414 AKAP12Q02952 1782 aa-0.56□□□□□ -2.5
COPS3-206ENST00000471414 SPRR2EP22531 72 aa-0.57□□□□□ -2.5
COPS3-206ENST00000471414 WFDC13Q8IUB5 93 aa-0.57□□□□□ -2.5
COPS3-206ENST00000471414 UBE2D4Q9Y2X8 147 aa-0.57□□□□□ -2.5
COPS3-206ENST00000471414 PREX1Q8TCU6 1659 aa-0.57□□□□□ -2.5
COPS3-206ENST00000471414 DOPEY1Q5JWR5 2465 aa-0.57□□□□□ -2.5
COPS3-206ENST00000471414 MAGI2Q86UL8 1455 aa-0.58□□□□□ -2.5
COPS3-206ENST00000471414 M0R143 59 aa-0.58□□□□□ -2.5
COPS3-206ENST00000471414 KRTAP19-8Q3LI54 63 aa-0.58□□□□□ -2.5
COPS3-206ENST00000471414 ATP10BO94823 1461 aa-0.59□□□□□ -2.5
COPS3-206ENST00000471414 UBR1Q8IWV7 1749 aa-0.59□□□□□ -2.5
COPS3-206ENST00000471414 RGPD8O14715 1765 aaPredicted RBP-0.6□□□□□ -2.5
COPS3-206ENST00000471414 RGPD5Q99666 1765 aa-0.6□□□□□ -2.5
COPS3-206ENST00000471414 MYO3AQ8NEV4 1616 aa-0.6□□□□□ -2.5
COPS3-206ENST00000471414 CICQ96RK0 1608 aaPredicted RBP-0.6□□□□□ -2.5
COPS3-206ENST00000471414 ABCC10Q5T3U5 1492 aa-0.6□□□□□ -2.5
COPS3-206ENST00000471414 VPS8Q8N3P4 1428 aa-0.6□□□□□ -2.51
COPS3-206ENST00000471414 COX7BP24311 80 aa-0.6□□□□□ -2.51
COPS3-206ENST00000471414 NMSQ5H8A3 153 aa-0.6□□□□□ -2.51
COPS3-206ENST00000471414 RGPD1P0DJD0 1748 aa-0.61□□□□□ -2.51
COPS3-206ENST00000471414 TIAM2Q8IVF5 1701 aa-0.61□□□□□ -2.51
COPS3-206ENST00000471414 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.61□□□□□ -2.51
COPS3-206ENST00000471414 LRRC7Q96NW7 1537 aa-0.61□□□□□ -2.51
COPS3-206ENST00000471414 RGPD4Q7Z3J3 1758 aa-0.61□□□□□ -2.51
COPS3-206ENST00000471414 C4AP0C0L4 1744 aa-0.61□□□□□ -2.51
COPS3-206ENST00000471414 C4BP0C0L5 1744 aa-0.61□□□□□ -2.51
COPS3-206ENST00000471414 SUPT6HQ7KZ85 1726 aaKnown RBP-0.61□□□□□ -2.51
COPS3-206ENST00000471414 KNL1Q8NG31 2342 aa-0.61□□□□□ -2.51
COPS3-206ENST00000471414 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms