RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 ATXN8Q156A1 80 aa2.58□□□□□ -2
CFHR3-204ENST00000461558 DAND5Q8N907 189 aa2.58□□□□□ -2
CFHR3-204ENST00000461558 SIGMAR1Q99720 223 aa2.58□□□□□ -2
CFHR3-204ENST00000461558 ITPR2Q14571 2701 aa2.57□□□□□ -2
CFHR3-204ENST00000461558 TRBV6-8A0A0A6YYG3 113 aa2.57□□□□□ -2
CFHR3-204ENST00000461558 IGHV3OR16-9A0A0B4J2B5 98 aa2.57□□□□□ -2
CFHR3-204ENST00000461558 TRGV4A0A0C4DH28 118 aa2.57□□□□□ -2
CFHR3-204ENST00000461558 TRBV10-2A0A0K0K1G8 114 aa2.57□□□□□ -2
CFHR3-204ENST00000461558 H7C2G1 150 aa2.57□□□□□ -2
CFHR3-204ENST00000461558 LST1O00453 97 aa2.57□□□□□ -2
CFHR3-204ENST00000461558 RPL13AP40429 203 aaKnown RBP2.57□□□□□ -2
CFHR3-204ENST00000461558 CLEC2BQ92478 149 aa2.57□□□□□ -2
CFHR3-204ENST00000461558 SONP18583 2426 aaKnown RBP2.57□□□□□ -2
CFHR3-204ENST00000461558 TLN2Q9Y4G6 2542 aa2.57□□□□□ -2
CFHR3-204ENST00000461558 LINC00959A0A1B0GUT2 108 aa2.56□□□□□ -2
CFHR3-204ENST00000461558 SMIM9A6NGZ8 99 aa2.56□□□□□ -2
CFHR3-204ENST00000461558 H3BT86 120 aa2.56□□□□□ -2
CFHR3-204ENST00000461558 UBE2L6O14933 153 aa2.56□□□□□ -2
CFHR3-204ENST00000461558 CIRBPQ14011 172 aaKnown RBP2.56□□□□□ -2
CFHR3-204ENST00000461558 DEFB121Q5J5C9 76 aa2.56□□□□□ -2
CFHR3-204ENST00000461558 COX7B2Q8TF08 81 aa2.56□□□□□ -2
CFHR3-204ENST00000461558 IGKV2-28A0A075B6P5 120 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 COX7A2LO14548 114 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 IGKV2D-28P01615 120 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 MT-ATP8P03928 68 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 COX6CP09669 75 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 DEFB130BP0DP73 79 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 DEFB130AP0DP74 79 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 CXCL6P80162 114 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 FAM222AQ5U5X8 452 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 COPS9Q8WXC6 57 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 UNC79Q9P2D8 2635 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 C22orf24Q9Y442 160 aa2.55□□□□□ -2
CFHR3-204ENST00000461558 ACANP16112 2415 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 GCN1Q92616 2671 aaKnown RBP2.54□□□□□ -2
CFHR3-204ENST00000461558 TEX49A0A1B0GTD5 131 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 LYRM9A8MSI8 78 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 IBA57-AS1B1ANH7 110 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 TMEM262E9PQX1 116 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 TRACP01848 142 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 RPL28P46779 137 aaKnown RBP2.54□□□□□ -2
CFHR3-204ENST00000461558 CCL18P55774 89 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 MEIG1Q5JSS6 88 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 C2orf82Q6UX34 121 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 MIR7-3HGQ8N6C7 128 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 LINC00337Q8N6G1 96 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 Q8NAQ8 132 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 UBE2WQ96B02 151 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 CITED1Q99966 193 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 PRO0255Q9UI72 69 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 OTOGQ6ZRI0 2925 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 VWFP04275 2813 aa2.54□□□□□ -2
CFHR3-204ENST00000461558 JMJD1CQ15652 2540 aa2.53□□□□□ -2
CFHR3-204ENST00000461558 TRAV26-1A0A087WT03 109 aa2.53□□□□□ -2
CFHR3-204ENST00000461558 TRAV13-2A0A0B4J235 113 aa2.53□□□□□ -2
CFHR3-204ENST00000461558 IGKV3OR2-268A0A0C4DH90 116 aa2.53□□□□□ -2
CFHR3-204ENST00000461558 KIAA0087Q14695 138 aa2.53□□□□□ -2
CFHR3-204ENST00000461558 DEFB135Q30KP9 77 aa2.53□□□□□ -2
CFHR3-204ENST00000461558 C5orf38Q86SI9 138 aa2.53□□□□□ -2
CFHR3-204ENST00000461558 Q8IZM0 81 aa2.53□□□□□ -2
CFHR3-204ENST00000461558 WFDC9Q8NEX5 89 aa2.53□□□□□ -2
CFHR3-204ENST00000461558 TOMM7Q9P0U1 55 aa2.53□□□□□ -2
CFHR3-204ENST00000461558 TENM1Q9UKZ4 2725 aa2.53□□□□□ -2
CFHR3-204ENST00000461558 HELZ2Q9BYK8 2649 aaKnown RBP2.53□□□□□ -2.01
CFHR3-204ENST00000461558 CCDC168Q8NDH2 2452 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 NSD1Q96L73 2696 aaPredicted RBP2.52□□□□□ -2.01
CFHR3-204ENST00000461558 A0A096LPF7 62 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 TRAV8-4A0A0B4J246 113 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 FAM240AA0A1B0GVK7 77 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 DEFB4AO15263 64 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 CRPP02741 224 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 MIFP14174 115 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 APOC4P55056 127 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 LINC00158P58513 81 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 SS18Q15532 418 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 MRPL23Q16540 153 aaKnown RBP2.52□□□□□ -2.01
CFHR3-204ENST00000461558 SMIM11BQ8TCY0 68 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 SND1-IT1Q9HBX3 110 aa2.52□□□□□ -2.01
CFHR3-204ENST00000461558 FASNP49327 2511 aaKnown RBP2.51□□□□□ -2.01
CFHR3-204ENST00000461558 ATP5G1P05496 136 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 BAALC-AS2P0C853 105 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 PFN2P35080 140 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 XCL1P47992 114 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 CKS1BP61024 79 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 DAD1P61803 113 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 C6orf226Q5I0X4 101 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 Q6Q795 121 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 CLPSL2Q6UWE3 100 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 SDIM1Q6ZPB5 146 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 LINC00269Q8N2A0 174 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 CHCHD10Q8WYQ3 142 aaPredicted RBP2.51□□□□□ -2.01
CFHR3-204ENST00000461558 MTORP42345 2549 aa2.51□□□□□ -2.01
CFHR3-204ENST00000461558 SETD2Q9BYW2 2564 aaPredicted RBP2.5□□□□□ -2.01
CFHR3-204ENST00000461558 A0A1B0GV72 72 aa2.5□□□□□ -2.01
CFHR3-204ENST00000461558 H0YGX0 51 aa2.5□□□□□ -2.01
CFHR3-204ENST00000461558 NDUFC2O95298 119 aa2.5□□□□□ -2.01
CFHR3-204ENST00000461558 SPART-AS1P0CW21 52 aa2.5□□□□□ -2.01
CFHR3-204ENST00000461558 CXCL5P42830 114 aa2.5□□□□□ -2.01
CFHR3-204ENST00000461558 REG3AQ06141 175 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms