RNA–Protein interactions for RNA: ENST00000460686.1

FAM228B-201, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 357 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-201ENST00000460686 HERV-K104P63124 156 aa3.22□□□□□ -1.89
FAM228B-201ENST00000460686 CIRBPQ14011 172 aaKnown RBP3.22□□□□□ -1.89
FAM228B-201ENST00000460686 BVES-AS1Q5T3Y7 98 aa3.22□□□□□ -1.89
FAM228B-201ENST00000460686 LINC00242Q5T6M2 205 aa3.22□□□□□ -1.89
FAM228B-201ENST00000460686 CEMP1Q6PRD7 247 aaPredicted RBP3.22□□□□□ -1.89
FAM228B-201ENST00000460686 DEFB104AQ8WTQ1 72 aa3.22□□□□□ -1.89
FAM228B-201ENST00000460686 PPDPFQ9H3Y8 114 aa3.22□□□□□ -1.89
FAM228B-201ENST00000460686 SPANXB1Q9NS25 103 aaPredicted RBP3.22□□□□□ -1.89
FAM228B-201ENST00000460686 TP73-AS1Q9UF72 201 aa3.22□□□□□ -1.89
FAM228B-201ENST00000460686 VPS13DQ5THJ4 4388 aa3.22□□□□□ -1.89
FAM228B-201ENST00000460686 HECTD4Q9Y4D8 3996 aa3.22□□□□□ -1.89
FAM228B-201ENST00000460686 TRAV13-1A0A0B4J241 112 aa3.21□□□□□ -1.9
FAM228B-201ENST00000460686 A0A0J9YXY3 114 aa3.21□□□□□ -1.9
FAM228B-201ENST00000460686 TMEM238C9JI98 176 aa3.21□□□□□ -1.9
FAM228B-201ENST00000460686 H0Y9J4 135 aa3.21□□□□□ -1.9
FAM228B-201ENST00000460686 HTN3P15516 51 aa3.21□□□□□ -1.9
FAM228B-201ENST00000460686 MPV17L2Q567V2 206 aa3.21□□□□□ -1.9
FAM228B-201ENST00000460686 LYPD5Q6UWN5 251 aa3.21□□□□□ -1.9
FAM228B-201ENST00000460686 CEND1Q8N111 149 aa3.21□□□□□ -1.9
FAM228B-201ENST00000460686 ORAOV1Q8WV07 137 aa3.21□□□□□ -1.9
FAM228B-201ENST00000460686 HIST1H4GQ99525 98 aa3.21□□□□□ -1.9
FAM228B-201ENST00000460686 DHRS4-AS1Q9P1J3 65 aa3.21□□□□□ -1.9
FAM228B-201ENST00000460686 IGLV4-60A0A075B6I1 120 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 IGHV3OR16-9A0A0B4J2B5 98 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 LINC00959A0A1B0GUT2 108 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 NDUFA1O15239 70 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 APOMO95445 188 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 IFITM1P13164 125 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 CXCL5P42830 114 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 HINT1P49773 126 aaPredicted RBP3.2□□□□□ -1.9
FAM228B-201ENST00000460686 TCTAP57738 103 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 BATFQ16520 125 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 CD164L2Q6UWJ8 174 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
FAM228B-201ENST00000460686 SPANXDQ9BXN6 97 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 SPANXCQ9NY87 97 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 CDKN2A-AS1Q9UH64 79 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 NDUFA12Q9UI09 145 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 KLK5Q9Y337 293 aaPredicted RBP3.2□□□□□ -1.9
FAM228B-201ENST00000460686 DNAH10Q8IVF4 4471 aa3.2□□□□□ -1.9
FAM228B-201ENST00000460686 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.19□□□□□ -1.9
FAM228B-201ENST00000460686 F8WDY8 70 aa3.19□□□□□ -1.9
FAM228B-201ENST00000460686 LY6G6CO95867 125 aa3.19□□□□□ -1.9
FAM228B-201ENST00000460686 CRPP02741 224 aa3.19□□□□□ -1.9
FAM228B-201ENST00000460686 ANGP03950 147 aaKnown RBP3.19□□□□□ -1.9
FAM228B-201ENST00000460686 SPINK8P0C7L1 97 aa3.19□□□□□ -1.9
FAM228B-201ENST00000460686 SMIM13P0DJ93 91 aa3.19□□□□□ -1.9
FAM228B-201ENST00000460686 CCL18P55774 89 aa3.19□□□□□ -1.9
FAM228B-201ENST00000460686 COX6A2Q02221 97 aa3.19□□□□□ -1.9
FAM228B-201ENST00000460686 REG3AQ06141 175 aa3.19□□□□□ -1.9
FAM228B-201ENST00000460686 MIAQ16674 131 aa3.19□□□□□ -1.9
FAM228B-201ENST00000460686 RNASE13Q5GAN3 156 aaKnown RBP3.19□□□□□ -1.9
FAM228B-201ENST00000460686 LINC01556Q5JQF7 62 aa3.19□□□□□ -1.9
FAM228B-201ENST00000460686 TRAV8-3A0A0A6YYJ7 113 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 A0A1B0GWB2 263 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 IBA57-AS1B1ANH7 110 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 COX7A2LO14548 114 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 TSPEAR-AS2P59090 65 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 COX17Q14061 63 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 LYRM7Q5U5X0 104 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 CFAP161Q6P656 301 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 Q8IZM0 81 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 LINC00269Q8N2A0 174 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 C10orf126Q8N4M7 172 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 COX7B2Q8TF08 81 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 ZNF625Q96I27 306 aaPredicted RBP3.18□□□□□ -1.9
FAM228B-201ENST00000460686 UPK3BQ9BT76 320 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 TTTY13Q9BZ97 58 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 PKHD1P08F94 4074 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 DNAH2Q9P225 4427 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 FAT2Q9NYQ8 4349 aa3.18□□□□□ -1.9
FAM228B-201ENST00000460686 DNAH6Q9C0G6 4158 aa3.17□□□□□ -1.9
FAM228B-201ENST00000460686 IGHV3-64A0A075B6Q5 118 aa3.17□□□□□ -1.9
FAM228B-201ENST00000460686 IGHV3-30P01768 117 aa3.17□□□□□ -1.9
FAM228B-201ENST00000460686 IGHV3-30-5P0DP03 117 aa3.17□□□□□ -1.9
FAM228B-201ENST00000460686 XCL1P47992 114 aa3.17□□□□□ -1.9
FAM228B-201ENST00000460686 ESRGQ1W209 222 aa3.17□□□□□ -1.9
FAM228B-201ENST00000460686 C6orf226Q5I0X4 101 aa3.17□□□□□ -1.9
FAM228B-201ENST00000460686 CHCHD10Q8WYQ3 142 aaPredicted RBP3.17□□□□□ -1.9
FAM228B-201ENST00000460686 RMI2Q96E14 147 aa3.17□□□□□ -1.9
FAM228B-201ENST00000460686 HERC2O95714 4834 aa3.16□□□□□ -1.9
FAM228B-201ENST00000460686 A0A0B4J2C4 111 aa3.16□□□□□ -1.9
FAM228B-201ENST00000460686 IGKV3OR2-268A0A0C4DH90 116 aa3.16□□□□□ -1.9
FAM228B-201ENST00000460686 TAX1BP3O14907 124 aa3.16□□□□□ -1.9
FAM228B-201ENST00000460686 FXYD2P54710 66 aa3.16□□□□□ -1.9
FAM228B-201ENST00000460686 CKS1BP61024 79 aa3.16□□□□□ -1.9
FAM228B-201ENST00000460686 MEIG1Q5JSS6 88 aa3.16□□□□□ -1.9
FAM228B-201ENST00000460686 GTF2H5Q6ZYL4 71 aa3.16□□□□□ -1.9
FAM228B-201ENST00000460686 KLK12Q9UKR0 248 aa3.16□□□□□ -1.9
FAM228B-201ENST00000460686 GVQW2A0A096LPI5 108 aaPredicted RBP3.15□□□□□ -1.91
FAM228B-201ENST00000460686 FABP2P12104 132 aa3.15□□□□□ -1.91
FAM228B-201ENST00000460686 ENHOQ6UWT2 76 aa3.15□□□□□ -1.91
FAM228B-201ENST00000460686 C5orf38Q86SI9 138 aa3.15□□□□□ -1.91
FAM228B-201ENST00000460686 UBE2WQ96B02 151 aa3.15□□□□□ -1.91
FAM228B-201ENST00000460686 NHP2Q9NX24 153 aaKnown RBP3.15□□□□□ -1.91
FAM228B-201ENST00000460686 PRO1854Q9UHT4 67 aa3.15□□□□□ -1.91
FAM228B-201ENST00000460686 TRBV20-1A0A075B6N2 111 aa3.14□□□□□ -1.91
FAM228B-201ENST00000460686 LOC107984156A0A0G2JMH3 177 aa3.14□□□□□ -1.91
FAM228B-201ENST00000460686 A0A1B0GV90 55 aa3.14□□□□□ -1.91
FAM228B-201ENST00000460686 A0A1W2PPM0 123 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms