RNA–Protein interactions for RNA: ENST00000460686.1

FAM228B-201, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 357 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-201ENST00000460686 AEBP2Q6ZN18 517 aaPredicted RBP28.67■■■□□ 2.18
FAM228B-201ENST00000460686 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
FAM228B-201ENST00000460686 SENP3Q9H4L4 574 aaPredicted RBP24.43■■□□□ 1.5
FAM228B-201ENST00000460686 PHF23Q9BUL5 403 aaPredicted RBP24.26■■□□□ 1.47
FAM228B-201ENST00000460686 FOXD1Q16676 465 aa22.69■■□□□ 1.22
FAM228B-201ENST00000460686 PLPPR3Q6T4P5 718 aa22.33■■□□□ 1.17
FAM228B-201ENST00000460686 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
FAM228B-201ENST00000460686 ADRA2BP18089 450 aa21.53■■□□□ 1.04
FAM228B-201ENST00000460686 PIAS4Q8N2W9 510 aaPredicted RBP21.36■■□□□ 1.01
FAM228B-201ENST00000460686 MSH5O43196 834 aa21.1■□□□□ 0.97
FAM228B-201ENST00000460686 POTEDQ86YR6 584 aa19.82■□□□□ 0.76
FAM228B-201ENST00000460686 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
FAM228B-201ENST00000460686 MAPK8IP2Q13387 824 aaPredicted RBP19.65■□□□□ 0.74
FAM228B-201ENST00000460686 PPP4R3CPQ6ZMV5 832 aa19.63■□□□□ 0.73
FAM228B-201ENST00000460686 DMRT2Q9Y5R5 561 aa19.42■□□□□ 0.7
FAM228B-201ENST00000460686 CNKSR2Q8WXI2 1034 aa19.15■□□□□ 0.66
FAM228B-201ENST00000460686 NCBP3Q53F19 620 aaKnown RBP19.05■□□□□ 0.64
FAM228B-201ENST00000460686 RNF216Q9NWF9 866 aaPredicted RBP18.86■□□□□ 0.61
FAM228B-201ENST00000460686 HOXD11P31277 338 aaPredicted RBP18.85■□□□□ 0.61
FAM228B-201ENST00000460686 KCNA4P22459 653 aa18.77■□□□□ 0.6
FAM228B-201ENST00000460686 DCAF8L1A6NGE4 600 aa18.72■□□□□ 0.59
FAM228B-201ENST00000460686 NPM3O75607 178 aaKnown RBP18.72■□□□□ 0.59
FAM228B-201ENST00000460686 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
FAM228B-201ENST00000460686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.07■□□□□ 0.48
FAM228B-201ENST00000460686 RNF39Q9H2S5 420 aa18.01■□□□□ 0.47
FAM228B-201ENST00000460686 CACNB1Q02641 598 aaPredicted RBP17.88■□□□□ 0.45
FAM228B-201ENST00000460686 SLC4A1APQ9BWU0 796 aaKnown RBP17.84■□□□□ 0.45
FAM228B-201ENST00000460686 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
FAM228B-201ENST00000460686 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
FAM228B-201ENST00000460686 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
FAM228B-201ENST00000460686 FOXD4L1Q9NU39 408 aa17.39■□□□□ 0.37
FAM228B-201ENST00000460686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
FAM228B-201ENST00000460686 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
FAM228B-201ENST00000460686 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.36
FAM228B-201ENST00000460686 CAPN15O75808 1086 aa17.3■□□□□ 0.36
FAM228B-201ENST00000460686 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
FAM228B-201ENST00000460686 APLP2Q06481 763 aa17.28■□□□□ 0.36
FAM228B-201ENST00000460686 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
FAM228B-201ENST00000460686 ZBTB22O15209 634 aa17.23■□□□□ 0.35
FAM228B-201ENST00000460686 TRHP20396 242 aaPredicted RBP17.14■□□□□ 0.33
FAM228B-201ENST00000460686 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
FAM228B-201ENST00000460686 DSG3P32926 999 aa17.02■□□□□ 0.32
FAM228B-201ENST00000460686 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
FAM228B-201ENST00000460686 ABCB7O75027 752 aa16.94■□□□□ 0.3
FAM228B-201ENST00000460686 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
FAM228B-201ENST00000460686 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
FAM228B-201ENST00000460686 ATXN8OSP0DMR3 200 aa16.78■□□□□ 0.28
FAM228B-201ENST00000460686 POLA2Q14181 598 aa16.74■□□□□ 0.27
FAM228B-201ENST00000460686 ZBTB12Q9Y330 459 aaPredicted RBP16.44■□□□□ 0.22
FAM228B-201ENST00000460686 RBM42Q9BTD8 480 aaKnown RBP16.27■□□□□ 0.2
FAM228B-201ENST00000460686 FBLN2P98095 1184 aa16.25■□□□□ 0.19
FAM228B-201ENST00000460686 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
FAM228B-201ENST00000460686 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
FAM228B-201ENST00000460686 AKT1S1Q96B36 256 aa15.97■□□□□ 0.15
FAM228B-201ENST00000460686 SPDYE2BA6NHP3 402 aa15.94■□□□□ 0.14
FAM228B-201ENST00000460686 SPDYE6P0CI01 402 aa15.94■□□□□ 0.14
FAM228B-201ENST00000460686 SPDYE2Q495Y8 402 aa15.94■□□□□ 0.14
FAM228B-201ENST00000460686 ZNF692Q9BU19 519 aaPredicted RBP15.86■□□□□ 0.13
FAM228B-201ENST00000460686 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
FAM228B-201ENST00000460686 SSUH2Q9Y2M2 353 aa15.75■□□□□ 0.11
FAM228B-201ENST00000460686 CHRDL2Q6WN34 429 aa15.73■□□□□ 0.11
FAM228B-201ENST00000460686 PITPNM1O00562 1244 aa15.65■□□□□ 0.1
FAM228B-201ENST00000460686 POTEHQ6S545 545 aa15.64■□□□□ 0.09
FAM228B-201ENST00000460686 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
FAM228B-201ENST00000460686 SPDYE4A6NLX3 237 aa15.63■□□□□ 0.09
FAM228B-201ENST00000460686 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
FAM228B-201ENST00000460686 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
FAM228B-201ENST00000460686 PIP4P2Q8N4L2 257 aa15.44■□□□□ 0.06
FAM228B-201ENST00000460686 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.05
FAM228B-201ENST00000460686 PRR29P0C7W0 189 aa15.36■□□□□ 0.05
FAM228B-201ENST00000460686 FKBP8Q14318 412 aa15.32■□□□□ 0.04
FAM228B-201ENST00000460686 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
FAM228B-201ENST00000460686 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
FAM228B-201ENST00000460686 PROM2Q8N271 834 aa15.21■□□□□ 0.03
FAM228B-201ENST00000460686 CHADLQ6NUI6 762 aa15.2■□□□□ 0.02
FAM228B-201ENST00000460686 HAX1O00165 279 aa15.1■□□□□ 0.01
FAM228B-201ENST00000460686 CREBZFQ9NS37 354 aa15.03■□□□□ -0
FAM228B-201ENST00000460686 FARP1Q9Y4F1 1045 aaPredicted RBP15□□□□□ -0.01
FAM228B-201ENST00000460686 C19orf67A6NJJ6 358 aa14.89□□□□□ -0.03
FAM228B-201ENST00000460686 MIER1Q8N108 512 aa14.88□□□□□ -0.03
FAM228B-201ENST00000460686 PLEKHG5O94827 1062 aa14.87□□□□□ -0.03
FAM228B-201ENST00000460686 SP7Q8TDD2 431 aaPredicted RBP14.87□□□□□ -0.03
FAM228B-201ENST00000460686 EVX2Q03828 476 aa14.86□□□□□ -0.03
FAM228B-201ENST00000460686 FBXO3Q9UK99 471 aa14.86□□□□□ -0.03
FAM228B-201ENST00000460686 PLCD3Q8N3E9 789 aa14.84□□□□□ -0.03
FAM228B-201ENST00000460686 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
FAM228B-201ENST00000460686 CD44P16070 742 aaKnown RBP14.82□□□□□ -0.04
FAM228B-201ENST00000460686 MNX1P50219 401 aaPredicted RBP14.79□□□□□ -0.04
FAM228B-201ENST00000460686 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
FAM228B-201ENST00000460686 ZRANB1Q9UGI0 708 aa14.69□□□□□ -0.06
FAM228B-201ENST00000460686 ZBTB47Q9UFB7 747 aaPredicted RBP14.67□□□□□ -0.06
FAM228B-201ENST00000460686 VASPP50552 380 aaPredicted RBP14.65□□□□□ -0.06
FAM228B-201ENST00000460686 GABBR2O75899 941 aa14.58□□□□□ -0.08
FAM228B-201ENST00000460686 TSPYL2Q9H2G4 693 aaPredicted RBP14.58□□□□□ -0.08
FAM228B-201ENST00000460686 ZNF579Q8NAF0 562 aaKnown RBP14.57□□□□□ -0.08
FAM228B-201ENST00000460686 KLHL34Q8N239 644 aa14.56□□□□□ -0.08
FAM228B-201ENST00000460686 RASEFQ8IZ41 740 aa14.52□□□□□ -0.09
FAM228B-201ENST00000460686 PHF12Q96QT6 1004 aa14.52□□□□□ -0.09
FAM228B-201ENST00000460686 CLCN6P51797 869 aa14.48□□□□□ -0.09
FAM228B-201ENST00000460686 NUBP1P53384 320 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms