RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 LYPD5Q6UWN5 251 aa4.43□□□□□ -1.7
USP46-202ENST00000451218 ANKRD29Q8N6D5 301 aa4.43□□□□□ -1.7
USP46-202ENST00000451218 UBL5Q9BZL1 73 aa4.43□□□□□ -1.7
USP46-202ENST00000451218 C22orf24Q9Y442 160 aa4.43□□□□□ -1.7
USP46-202ENST00000451218 A0A0J9YWU9 116 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 K7EP34 96 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 TCL1BO95988 128 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 HERVK_113P63121 156 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 MUSTN1Q8IVN3 82 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 IGKV2-28A0A075B6P5 120 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 TRAV13-2A0A0B4J235 113 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 IGKV2D-28P01615 120 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 MIAQ16674 131 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 MUC7Q8TAX7 377 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 C11orf45Q8TAV5 145 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 LINC01600Q96MT4 127 aa4.42□□□□□ -1.7
USP46-202ENST00000451218 H3BUT2 72 aa4.41□□□□□ -1.7
USP46-202ENST00000451218 TRAV13-1A0A0B4J241 112 aa4.41□□□□□ -1.7
USP46-202ENST00000451218 IGHV3-33P01772 117 aa4.41□□□□□ -1.7
USP46-202ENST00000451218 DAND5Q8N907 189 aa4.41□□□□□ -1.7
USP46-202ENST00000451218 A0A0B4J2C4 111 aa4.41□□□□□ -1.7
USP46-202ENST00000451218 ESRGQ1W209 222 aa4.41□□□□□ -1.7
USP46-202ENST00000451218 WFDC10BQ8IUB3 73 aa4.41□□□□□ -1.7
USP46-202ENST00000451218 NANOS2P60321 138 aaKnown RBP4.4□□□□□ -1.7
USP46-202ENST00000451218 LELP1Q5T871 98 aa4.4□□□□□ -1.7
USP46-202ENST00000451218 CASC2Q6XLA1 102 aa4.4□□□□□ -1.7
USP46-202ENST00000451218 LINC01561Q8N1V8 128 aa4.4□□□□□ -1.71
USP46-202ENST00000451218 MGAM2Q2M2H8 2515 aa4.4□□□□□ -1.71
USP46-202ENST00000451218 OCIAD2Q56VL3 154 aa4.4□□□□□ -1.71
USP46-202ENST00000451218 CAMK2N2Q96S95 79 aa4.39□□□□□ -1.71
USP46-202ENST00000451218 JMJD7-PLA2G4BH0Y9G9 81 aa4.39□□□□□ -1.71
USP46-202ENST00000451218 LINC00269Q8N2A0 174 aa4.39□□□□□ -1.71
USP46-202ENST00000451218 SMIM20Q8N5G0 67 aa4.39□□□□□ -1.71
USP46-202ENST00000451218 NDUFS5O43920 106 aa4.39□□□□□ -1.71
USP46-202ENST00000451218 LCE2CQ5TA81 110 aa4.39□□□□□ -1.71
USP46-202ENST00000451218 LINC00308Q8TCZ7 52 aa4.39□□□□□ -1.71
USP46-202ENST00000451218 Q9H8V8 135 aa4.39□□□□□ -1.71
USP46-202ENST00000451218 ERG28Q9UKR5 140 aa4.39□□□□□ -1.71
USP46-202ENST00000451218 ANGP03950 147 aaKnown RBP4.39□□□□□ -1.71
USP46-202ENST00000451218 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
USP46-202ENST00000451218 C10orf25Q5T742 122 aa4.38□□□□□ -1.71
USP46-202ENST00000451218 CLPSL2Q6UWE3 100 aa4.38□□□□□ -1.71
USP46-202ENST00000451218 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
USP46-202ENST00000451218 KRTAP1-5Q9BYS1 174 aa4.38□□□□□ -1.71
USP46-202ENST00000451218 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
USP46-202ENST00000451218 A0A0U1RQV1 116 aa4.37□□□□□ -1.71
USP46-202ENST00000451218 MRPL55Q7Z7F7 128 aaKnown RBP4.37□□□□□ -1.71
USP46-202ENST00000451218 LINC00337Q8N6G1 96 aa4.37□□□□□ -1.71
USP46-202ENST00000451218 COX7B2Q8TF08 81 aa4.37□□□□□ -1.71
USP46-202ENST00000451218 Q8IZM0 81 aa4.37□□□□□ -1.71
USP46-202ENST00000451218 H0YGX0 51 aa4.37□□□□□ -1.71
USP46-202ENST00000451218 REG3AQ06141 175 aa4.37□□□□□ -1.71
USP46-202ENST00000451218 CD164L2Q6UWJ8 174 aa4.37□□□□□ -1.71
USP46-202ENST00000451218 C2orf82Q6UX34 121 aa4.37□□□□□ -1.71
USP46-202ENST00000451218 KMT2CQ8NEZ4 4911 aaKnown RBP4.37□□□□□ -1.71
USP46-202ENST00000451218 LINC01620Q4KN68 170 aa4.36□□□□□ -1.71
USP46-202ENST00000451218 REG3GQ6UW15 175 aa4.36□□□□□ -1.71
USP46-202ENST00000451218 C6orf223Q8N319 242 aa4.36□□□□□ -1.71
USP46-202ENST00000451218 H7C2G1 150 aa4.36□□□□□ -1.71
USP46-202ENST00000451218 CHCHD10Q8WYQ3 142 aaPredicted RBP4.36□□□□□ -1.71
USP46-202ENST00000451218 SLPIP03973 132 aa4.36□□□□□ -1.71
USP46-202ENST00000451218 C5orf38Q86SI9 138 aa4.36□□□□□ -1.71
USP46-202ENST00000451218 KRTAP7-1Q8IUC3 87 aa4.36□□□□□ -1.71
USP46-202ENST00000451218 TRBV20-1A0A075B6N2 111 aa4.36□□□□□ -1.71
USP46-202ENST00000451218 SIGMAR1Q99720 223 aa4.36□□□□□ -1.71
USP46-202ENST00000451218 LINC00588Q9Y4M8 146 aa4.36□□□□□ -1.71
USP46-202ENST00000451218 TRAV8-4A0A0B4J246 113 aa4.35□□□□□ -1.71
USP46-202ENST00000451218 DNAH10OSP0CZ25 163 aa4.35□□□□□ -1.71
USP46-202ENST00000451218 CASC10Q5T4H9 136 aa4.35□□□□□ -1.71
USP46-202ENST00000451218 VPS13BQ7Z7G8 4022 aa4.35□□□□□ -1.71
USP46-202ENST00000451218 H3BMG7 143 aa4.35□□□□□ -1.71
USP46-202ENST00000451218 COX7A2LO14548 114 aa4.35□□□□□ -1.71
USP46-202ENST00000451218 FAM218AQ96MZ4 157 aa4.35□□□□□ -1.71
USP46-202ENST00000451218 LIMD2Q9BT23 127 aa4.35□□□□□ -1.71
USP46-202ENST00000451218 PRO1854Q9UHT4 67 aa4.35□□□□□ -1.71
USP46-202ENST00000451218 RYR2Q92736 4967 aa4.35□□□□□ -1.71
USP46-202ENST00000451218 TRBV30A0A0K0K1B3 111 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 IFITM1P13164 125 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 NPC2P61916 151 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 LRP1BQ9NZR2 4599 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 PRYO14603 147 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 WFDC2Q14508 124 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 GAGE2EQ4V326 116 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 C9orf116Q5BN46 136 aaPredicted RBP4.34□□□□□ -1.71
USP46-202ENST00000451218 GAGE2DQ9UEU5 116 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 SPCS1Q9Y6A9 102 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 SERP1Q9Y6X1 66 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 LINC01556Q5JQF7 62 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 CARD19Q96LW7 228 aa4.34□□□□□ -1.71
USP46-202ENST00000451218 UPK3BQ9BT76 320 aa4.34□□□□□ -1.72
USP46-202ENST00000451218 IGLV10-54A0A075B6I4 117 aa4.33□□□□□ -1.72
USP46-202ENST00000451218 A0A1B0GX51 115 aa4.33□□□□□ -1.72
USP46-202ENST00000451218 GVQW2A0A096LPI5 108 aaPredicted RBP4.33□□□□□ -1.72
USP46-202ENST00000451218 RPL28P46779 137 aaKnown RBP4.33□□□□□ -1.72
USP46-202ENST00000451218 NTN5Q8WTR8 489 aaPredicted RBP4.33□□□□□ -1.72
USP46-202ENST00000451218 DEFB131BA0A096LNP1 70 aa4.33□□□□□ -1.72
USP46-202ENST00000451218 IBA57-AS1B1ANH7 110 aa4.33□□□□□ -1.72
USP46-202ENST00000451218 MIR7-3HGQ8N6C7 128 aa4.33□□□□□ -1.72
USP46-202ENST00000451218 C6orf48Q9UBA6 75 aa4.33□□□□□ -1.72
USP46-202ENST00000451218 FAM236DA0A1B0GTK5 79 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms