RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 WNK1Q9H4A3 2382 aa7.01□□□□□ -1.29
SYNE2-206ENST00000441438 COX6CP09669 75 aa7.01□□□□□ -1.29
SYNE2-206ENST00000441438 SUMO4Q6EEV6 95 aa7.01□□□□□ -1.29
SYNE2-206ENST00000441438 LINC01006Q8NI28 216 aa7.01□□□□□ -1.29
SYNE2-206ENST00000441438 TRBV6-8A0A0A6YYG3 113 aa7□□□□□ -1.29
SYNE2-206ENST00000441438 P0C880 135 aa7□□□□□ -1.29
SYNE2-206ENST00000441438 Q6YL49 198 aa7□□□□□ -1.29
SYNE2-206ENST00000441438 CIRBP-AS1Q8TBR5 109 aa7□□□□□ -1.29
SYNE2-206ENST00000441438 ABCA2Q9BZC7 2435 aa7□□□□□ -1.29
SYNE2-206ENST00000441438 IGLV5-39A0A0G2JS06 123 aa7□□□□□ -1.29
SYNE2-206ENST00000441438 NDPQ00604 133 aa7□□□□□ -1.29
SYNE2-206ENST00000441438 C10orf25Q5T742 122 aa7□□□□□ -1.29
SYNE2-206ENST00000441438 Q8TAT8 98 aa7□□□□□ -1.29
SYNE2-206ENST00000441438 FBN2P35556 2912 aa7□□□□□ -1.29
SYNE2-206ENST00000441438 KAAG1Q9UBP8 84 aa6.99□□□□□ -1.29
SYNE2-206ENST00000441438 IGKV2-40A0A087WW87 121 aaPredicted RBP6.99□□□□□ -1.29
SYNE2-206ENST00000441438 A0A1W2PPR1 153 aa6.99□□□□□ -1.29
SYNE2-206ENST00000441438 NDUFA3O95167 84 aa6.99□□□□□ -1.29
SYNE2-206ENST00000441438 IGKV2D-40P01614 121 aaPredicted RBP6.99□□□□□ -1.29
SYNE2-206ENST00000441438 ANKRD17O75179 2603 aaKnown RBP6.99□□□□□ -1.29
SYNE2-206ENST00000441438 NF1P21359 2839 aa6.99□□□□□ -1.29
SYNE2-206ENST00000441438 MSMBP08118 114 aa6.99□□□□□ -1.29
SYNE2-206ENST00000441438 NOTCH2Q04721 2471 aa6.98□□□□□ -1.29
SYNE2-206ENST00000441438 PRRC2AP48634 2157 aaKnown RBP6.98□□□□□ -1.29
SYNE2-206ENST00000441438 IGHV3-73A0A0B4J1V6 119 aa6.98□□□□□ -1.29
SYNE2-206ENST00000441438 C2orf66Q6UXQ4 117 aa6.98□□□□□ -1.29
SYNE2-206ENST00000441438 MUSTN1Q8IVN3 82 aa6.98□□□□□ -1.29
SYNE2-206ENST00000441438 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
SYNE2-206ENST00000441438 MXRA5Q9NR99 2828 aa6.97□□□□□ -1.29
SYNE2-206ENST00000441438 MIR22HGQ0VDD5 57 aa6.97□□□□□ -1.29
SYNE2-206ENST00000441438 SMIM2Q9BVW6 85 aa6.97□□□□□ -1.29
SYNE2-206ENST00000441438 C2CD3Q4AC94 2353 aa6.97□□□□□ -1.29
SYNE2-206ENST00000441438 LOC101927531A0A1B0GV80 90 aa6.97□□□□□ -1.29
SYNE2-206ENST00000441438 PRAC2D3DTV9 90 aa6.97□□□□□ -1.29
SYNE2-206ENST00000441438 WWC2-AS2Q96NR7 200 aa6.97□□□□□ -1.29
SYNE2-206ENST00000441438 KRTAP1-3Q8IUG1 177 aa6.97□□□□□ -1.29
SYNE2-206ENST00000441438 TMEM263Q8WUH6 116 aaKnown RBP6.97□□□□□ -1.29
SYNE2-206ENST00000441438 CHCHD7Q9BUK0 85 aa6.97□□□□□ -1.29
SYNE2-206ENST00000441438 KIF25-AS1Q9Y6Z4 181 aa6.97□□□□□ -1.29
SYNE2-206ENST00000441438 A0A1B0GVX0 72 aa6.96□□□□□ -1.29
SYNE2-206ENST00000441438 LRCOL1A6NCL2 159 aa6.96□□□□□ -1.29
SYNE2-206ENST00000441438 TMEM254Q8TBM7 123 aa6.96□□□□□ -1.29
SYNE2-206ENST00000441438 AKAP9Q99996 3911 aa6.96□□□□□ -1.3
SYNE2-206ENST00000441438 A0A096LNT2 108 aa6.96□□□□□ -1.3
SYNE2-206ENST00000441438 TRAV12-3A0A0B4J271 114 aa6.96□□□□□ -1.3
SYNE2-206ENST00000441438 A0A0J9YY99 117 aa6.96□□□□□ -1.3
SYNE2-206ENST00000441438 CCL19Q99731 98 aa6.96□□□□□ -1.3
SYNE2-206ENST00000441438 IGKV3-7A0A075B6H7 116 aa6.95□□□□□ -1.3
SYNE2-206ENST00000441438 IGLV11-55A0A075B6I3 123 aa6.95□□□□□ -1.3
SYNE2-206ENST00000441438 C11orf86A6NJI1 115 aa6.95□□□□□ -1.3
SYNE2-206ENST00000441438 G3V318 75 aa6.95□□□□□ -1.3
SYNE2-206ENST00000441438 IGHV3-30P01768 117 aa6.95□□□□□ -1.3
SYNE2-206ENST00000441438 TLX1NBP0CAT3 122 aa6.95□□□□□ -1.3
SYNE2-206ENST00000441438 IGHV3-30-5P0DP03 117 aa6.95□□□□□ -1.3
SYNE2-206ENST00000441438 MTORP42345 2549 aa6.95□□□□□ -1.3
SYNE2-206ENST00000441438 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
SYNE2-206ENST00000441438 SMIM1B2RUZ4 78 aa6.94□□□□□ -1.3
SYNE2-206ENST00000441438 JMJD1CQ15652 2540 aa6.93□□□□□ -1.3
SYNE2-206ENST00000441438 NIPBLQ6KC79 2804 aaeCLIP6.93□□□□□ -1.3
SYNE2-206ENST00000441438 PPP1R17O96001 155 aa6.93□□□□□ -1.3
SYNE2-206ENST00000441438 DEFB1P60022 68 aa6.93□□□□□ -1.3
SYNE2-206ENST00000441438 BRD3OSQ6XYD6 125 aa6.93□□□□□ -1.3
SYNE2-206ENST00000441438 ACANP16112 2415 aa6.93□□□□□ -1.3
SYNE2-206ENST00000441438 DEFB104AQ8WTQ1 72 aa6.92□□□□□ -1.3
SYNE2-206ENST00000441438 F8P00451 2351 aa6.92□□□□□ -1.3
SYNE2-206ENST00000441438 A6NDX4 124 aa6.92□□□□□ -1.3
SYNE2-206ENST00000441438 RTL8CO15255 209 aa6.92□□□□□ -1.3
SYNE2-206ENST00000441438 Q8N9W7 124 aa6.92□□□□□ -1.3
SYNE2-206ENST00000441438 PRR15LQ9BU68 103 aa6.92□□□□□ -1.3
SYNE2-206ENST00000441438 DNAL4O96015 105 aa6.92□□□□□ -1.3
SYNE2-206ENST00000441438 KLK9Q2XQG4 91 aa6.92□□□□□ -1.3
SYNE2-206ENST00000441438 KLK9Q9UKQ9 250 aa6.92□□□□□ -1.3
SYNE2-206ENST00000441438 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
SYNE2-206ENST00000441438 LENEPQ9Y5L5 61 aa6.91□□□□□ -1.3
SYNE2-206ENST00000441438 IGLV4-69A0A075B6H9 119 aa6.91□□□□□ -1.3
SYNE2-206ENST00000441438 C9orf47Q6ZRZ4 202 aa6.91□□□□□ -1.3
SYNE2-206ENST00000441438 C20orf166-AS1Q96NR2 134 aa6.91□□□□□ -1.3
SYNE2-206ENST00000441438 LINC00846Q9NV44 126 aa6.91□□□□□ -1.3
SYNE2-206ENST00000441438 BPY2O14599 106 aa6.9□□□□□ -1.3
SYNE2-206ENST00000441438 Q8N9P0 234 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-206ENST00000441438 AMELXQ99217 191 aa6.9□□□□□ -1.3
SYNE2-206ENST00000441438 CTSGP08311 255 aa6.9□□□□□ -1.3
SYNE2-206ENST00000441438 DNAH10OSP0CZ25 163 aa6.9□□□□□ -1.3
SYNE2-206ENST00000441438 LY6EQ16553 131 aa6.9□□□□□ -1.3
SYNE2-206ENST00000441438 Q1RN00 199 aa6.9□□□□□ -1.3
SYNE2-206ENST00000441438 CAMK2N1Q7Z7J9 78 aa6.9□□□□□ -1.3
SYNE2-206ENST00000441438 CLPSL1A2RUU4 121 aa6.9□□□□□ -1.31
SYNE2-206ENST00000441438 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.89□□□□□ -1.31
SYNE2-206ENST00000441438 Q8NAQ8 132 aa6.89□□□□□ -1.31
SYNE2-206ENST00000441438 Q8NBF4 154 aa6.89□□□□□ -1.31
SYNE2-206ENST00000441438 HIVEP1P15822 2718 aa6.89□□□□□ -1.31
SYNE2-206ENST00000441438 A0A0J9YX75 114 aa6.88□□□□□ -1.31
SYNE2-206ENST00000441438 IGIPA6NJ69 53 aa6.88□□□□□ -1.31
SYNE2-206ENST00000441438 A8MUU9 505 aa6.88□□□□□ -1.31
SYNE2-206ENST00000441438 Q6ZR54 194 aa6.88□□□□□ -1.31
SYNE2-206ENST00000441438 NTM-AS1Q6ZSK4 140 aa6.88□□□□□ -1.31
SYNE2-206ENST00000441438 KLHL30-AS1Q8NEE0 82 aa6.88□□□□□ -1.31
SYNE2-206ENST00000441438 MUC7Q8TAX7 377 aa6.88□□□□□ -1.31
SYNE2-206ENST00000441438 C15orf56Q8N910 161 aa6.88□□□□□ -1.31
SYNE2-206ENST00000441438 RPL36ALQ969Q0 106 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms