RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 NDUFA12Q9UI09 145 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 AP4S1Q9Y587 144 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 LENEPQ9Y5L5 61 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 SSPOA2VEC9 5147 aa0.95□□□□□ -2.26
HMGB1P27-201ENST00000431429 TRBV7-3A0A075B6L6 115 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 TRAV12-1A0A0B4J245 112 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 IGKV3D-7A0A0C4DH55 119 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 IGKV3OR2-268A0A0C4DH90 116 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 TRBV10-1A0A0K0K1A3 114 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 LOC100130705A0A1B0GUX0 176 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 IFITM5A6NNB3 132 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 C1orf196B1AJZ1 125 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 S100A10P60903 97 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 MT1HP80294 61 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 NMSQ5H8A3 153 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 LYRM7Q5U5X0 104 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 CFAP126Q5VTH2 177 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 XAF1Q6GPH4 301 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 SPAG11AQ6PDA7 123 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 AP3S1Q92572 193 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 S100A16Q96FQ6 103 aaKnown RBP0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 CIB3Q96Q77 187 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 COPZ2Q9P299 210 aa0.94□□□□□ -2.26
HMGB1P27-201ENST00000431429 MACF1Q9UPN3 7388 aaKnown RBP0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 FCGBPQ9Y6R7 5405 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 LOC110117498A0A087WWA1 95 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 IGKV2D-26A0A0A0MRZ7 120 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 TRBV6-8A0A0A6YYG3 113 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 TRAV1-2A0A0B4J238 106 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 TRAV21A0A0B4J279 112 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 LOC107984640A0A0U1RRK4 108 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 C3orf85A0A1B0GTC6 90 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 SMIM31A0A1B0GVY4 71 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 TCRBV3S1A0A5B6 114 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 IGKV2-29A2NJV5 120 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 RBAKDNA6NC62 111 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 TAX1BP3O14907 124 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 HMGB3O15347 200 aaKnown RBP0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 SURF2Q15527 256 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 CYP2G1PQ6ZSU1 146 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 LINC00305Q7Z4B0 112 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 LINC00269Q8N2A0 174 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 OR2T35Q8NGX2 323 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 AGPAT4-IT1Q9H0P7 198 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 NPVFQ9HCQ7 196 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 OR5AC2Q9NZP5 309 aa0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 PAIP2BQ9ULR5 123 aaKnown RBP0.93□□□□□ -2.26
HMGB1P27-201ENST00000431429 TRBV25-1A0A075B6N4 114 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 A0A096LNI7 61 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 S100A5P33763 92 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 UBE2BP63146 152 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 C9orf116Q5BN46 136 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 RNASE10Q5GAN6 216 aaKnown RBP0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 FAM74A1Q5RGS3 127 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 C10orf113Q5VZT2 155 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 Q6AWC8 147 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 FAM19A2Q8N3H0 131 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 LINC00526Q96FQ7 95 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 CARD19Q96LW7 228 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 PFDN5Q99471 154 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 SLC25A21Q9BQT8 299 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 LYRM2Q9NU23 88 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 SCN3BQ9NY72 215 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 COMMD3Q9UBI1 195 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 UBE2D4Q9Y2X8 147 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 DNAH8Q96JB1 4490 aa0.92□□□□□ -2.26
HMGB1P27-201ENST00000431429 GVQW2A0A096LPI5 108 aaPredicted RBP0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 IGHV1-58A0A0C4DH39 117 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 H3BQ15 152 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 NUPR1O60356 82 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 SPINK1P00995 79 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 IFNA1P01562 189 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 NBEAP1P0C6P0 100 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 IGLC2P0DOY2 106 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 SLC25A6P12236 298 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 RAB5CP51148 216 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 ROMO1P60602 79 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 UBE2D3P61077 147 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 UBE2D2P62837 147 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 GNG5P63218 68 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 SMCO1Q147U7 214 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 KRTAP26-1Q6PEX3 210 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 TMEM91Q6ZNR0 172 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 SFT2D1Q8WV19 159 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 AQP10Q96PS8 301 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 TP53RKQ96S44 253 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 GGACTQ9BVM4 153 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 NMES1Q9C002 83 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 TMEM14CQ9P0S9 112 aa0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 SYNE2Q8WXH0 6885 aaKnown RBP0.91□□□□□ -2.26
HMGB1P27-201ENST00000431429 IGHV1-24A0A0C4DH33 117 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 TRDV1A0A1B0GX56 115 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 M0R3E3 92 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 CCL25O15444 150 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 ARL14EPLP0DKL9 152 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 LINC00694P0DN24 101 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 RAB4BP61018 213 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 IQCJQ1A5X6 159 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms