RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 UBE2DNLQ8IWF7 75 aa5.28□□□□□ -1.56
AP001042.1-201ENST00000416842 LINC00308Q8TCZ7 52 aa5.28□□□□□ -1.56
AP001042.1-201ENST00000416842 TRBV30A0A0K0K1B3 111 aa5.27□□□□□ -1.57
AP001042.1-201ENST00000416842 GCSHP23434 173 aa5.27□□□□□ -1.57
AP001042.1-201ENST00000416842 CKS1BP61024 79 aa5.27□□□□□ -1.57
AP001042.1-201ENST00000416842 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
AP001042.1-201ENST00000416842 Q9HAA7 133 aa5.27□□□□□ -1.57
AP001042.1-201ENST00000416842 C6orf48Q9UBA6 75 aa5.27□□□□□ -1.57
AP001042.1-201ENST00000416842 ERG28Q9UKR5 140 aa5.27□□□□□ -1.57
AP001042.1-201ENST00000416842 A4D1N5 150 aa5.26□□□□□ -1.57
AP001042.1-201ENST00000416842 LRCOL1A6NCL2 159 aa5.26□□□□□ -1.57
AP001042.1-201ENST00000416842 USP17L23D6RBM5 183 aa5.26□□□□□ -1.57
AP001042.1-201ENST00000416842 CFC1BP0CG36 223 aa5.26□□□□□ -1.57
AP001042.1-201ENST00000416842 CFC1P0CG37 223 aa5.26□□□□□ -1.57
AP001042.1-201ENST00000416842 LINC00526Q96FQ7 95 aa5.26□□□□□ -1.57
AP001042.1-201ENST00000416842 APOBP04114 4563 aaKnown RBP5.25□□□□□ -1.57
AP001042.1-201ENST00000416842 A6NDN8 102 aa5.25□□□□□ -1.57
AP001042.1-201ENST00000416842 ZNF561-AS1K7EIQ3 104 aa5.25□□□□□ -1.57
AP001042.1-201ENST00000416842 TLX1NBP0CAT3 122 aa5.25□□□□□ -1.57
AP001042.1-201ENST00000416842 RPL24P83731 157 aaKnown RBP5.25□□□□□ -1.57
AP001042.1-201ENST00000416842 WFDC2Q14508 124 aa5.25□□□□□ -1.57
AP001042.1-201ENST00000416842 C9orf116Q5BN46 136 aaPredicted RBP5.25□□□□□ -1.57
AP001042.1-201ENST00000416842 MEIG1Q5JSS6 88 aa5.25□□□□□ -1.57
AP001042.1-201ENST00000416842 Q6ZRU5 148 aa5.25□□□□□ -1.57
AP001042.1-201ENST00000416842 MIR7-3HGQ8N6C7 128 aa5.25□□□□□ -1.57
AP001042.1-201ENST00000416842 LRP1BQ9NZR2 4599 aa5.25□□□□□ -1.57
AP001042.1-201ENST00000416842 A0A0B4J2C4 111 aa5.24□□□□□ -1.57
AP001042.1-201ENST00000416842 TMEM238LA0A1B0GVL6 79 aa5.24□□□□□ -1.57
AP001042.1-201ENST00000416842 A6NJY4 79 aa5.24□□□□□ -1.57
AP001042.1-201ENST00000416842 LINC00158P58513 81 aa5.24□□□□□ -1.57
AP001042.1-201ENST00000416842 CNBPP62633 177 aaKnown RBP5.24□□□□□ -1.57
AP001042.1-201ENST00000416842 TNP2Q05952 138 aa5.24□□□□□ -1.57
AP001042.1-201ENST00000416842 BATFQ16520 125 aa5.24□□□□□ -1.57
AP001042.1-201ENST00000416842 HIGD2BQ4VC39 106 aa5.24□□□□□ -1.57
AP001042.1-201ENST00000416842 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
AP001042.1-201ENST00000416842 DAND5Q8N907 189 aa5.24□□□□□ -1.57
AP001042.1-201ENST00000416842 COPS9Q8WXC6 57 aa5.24□□□□□ -1.57
AP001042.1-201ENST00000416842 FLG2Q5D862 2391 aaPredicted RBP5.23□□□□□ -1.57
AP001042.1-201ENST00000416842 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.23□□□□□ -1.57
AP001042.1-201ENST00000416842 C9orf118A6NHY6 69 aa5.23□□□□□ -1.57
AP001042.1-201ENST00000416842 SYCNQ0VAF6 134 aa5.23□□□□□ -1.57
AP001042.1-201ENST00000416842 C1orf134Q5TEV5 83 aa5.23□□□□□ -1.57
AP001042.1-201ENST00000416842 SND1-IT1Q9HBX3 110 aa5.23□□□□□ -1.57
AP001042.1-201ENST00000416842 NHP2Q9NX24 153 aaKnown RBP5.23□□□□□ -1.57
AP001042.1-201ENST00000416842 IGKV2-28A0A075B6P5 120 aa5.22□□□□□ -1.57
AP001042.1-201ENST00000416842 A0A0U1RRA0 63 aa5.22□□□□□ -1.57
AP001042.1-201ENST00000416842 NDUFC2O95298 119 aa5.22□□□□□ -1.57
AP001042.1-201ENST00000416842 IGKV2D-28P01615 120 aa5.22□□□□□ -1.57
AP001042.1-201ENST00000416842 INAFM2P0DMQ5 153 aa5.22□□□□□ -1.57
AP001042.1-201ENST00000416842 PFN2P35080 140 aa5.22□□□□□ -1.57
AP001042.1-201ENST00000416842 CAMK2N2Q96S95 79 aa5.22□□□□□ -1.57
AP001042.1-201ENST00000416842 DNAH8Q96JB1 4490 aa5.22□□□□□ -1.57
AP001042.1-201ENST00000416842 NDUFC2-KCTD14E9PQ53 114 aa5.21□□□□□ -1.58
AP001042.1-201ENST00000416842 K7ERJ3 54 aa5.21□□□□□ -1.58
AP001042.1-201ENST00000416842 Q8NDZ9 215 aa5.21□□□□□ -1.58
AP001042.1-201ENST00000416842 PRO1854Q9UHT4 67 aa5.21□□□□□ -1.58
AP001042.1-201ENST00000416842 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
AP001042.1-201ENST00000416842 EPM2AB3EWF7 344 aa5.2□□□□□ -1.58
AP001042.1-201ENST00000416842 C14orf177Q52M58 125 aa5.2□□□□□ -1.58
AP001042.1-201ENST00000416842 Q6ZRP5 223 aa5.2□□□□□ -1.58
AP001042.1-201ENST00000416842 DNAH5Q8TE73 4624 aa5.2□□□□□ -1.58
AP001042.1-201ENST00000416842 NPC2P61916 151 aa5.19□□□□□ -1.58
AP001042.1-201ENST00000416842 CARD19Q96LW7 228 aa5.19□□□□□ -1.58
AP001042.1-201ENST00000416842 PLA2G2DQ9UNK4 145 aa5.19□□□□□ -1.58
AP001042.1-201ENST00000416842 A0A087WTM6 91 aa5.18□□□□□ -1.58
AP001042.1-201ENST00000416842 TRBV10-2A0A0K0K1G8 114 aa5.18□□□□□ -1.58
AP001042.1-201ENST00000416842 A0A1B0GV90 55 aa5.18□□□□□ -1.58
AP001042.1-201ENST00000416842 LECT2O14960 151 aa5.18□□□□□ -1.58
AP001042.1-201ENST00000416842 TSPAN13O95857 204 aa5.18□□□□□ -1.58
AP001042.1-201ENST00000416842 C9orf129Q5T035 196 aaKnown RBP5.18□□□□□ -1.58
AP001042.1-201ENST00000416842 LINC00337Q8N6G1 96 aa5.18□□□□□ -1.58
AP001042.1-201ENST00000416842 C9orf163Q8N9P6 203 aa5.18□□□□□ -1.58
AP001042.1-201ENST00000416842 IGLV5-37A0A075B6J1 123 aa5.17□□□□□ -1.58
AP001042.1-201ENST00000416842 TRAV13-2A0A0B4J235 113 aa5.17□□□□□ -1.58
AP001042.1-201ENST00000416842 A0A1W2PPM0 123 aa5.17□□□□□ -1.58
AP001042.1-201ENST00000416842 PSCAO43653 123 aa5.17□□□□□ -1.58
AP001042.1-201ENST00000416842 VPREB1P12018 145 aa5.17□□□□□ -1.58
AP001042.1-201ENST00000416842 SDIM1Q6ZPB5 146 aa5.17□□□□□ -1.58
AP001042.1-201ENST00000416842 KRTAP7-1Q8IUC3 87 aa5.17□□□□□ -1.58
AP001042.1-201ENST00000416842 Q8N814 137 aa5.17□□□□□ -1.58
AP001042.1-201ENST00000416842 RAB37Q96AX2 223 aa5.17□□□□□ -1.58
AP001042.1-201ENST00000416842 LOC107984640A0A0U1RRK4 108 aa5.16□□□□□ -1.58
AP001042.1-201ENST00000416842 H3BUT2 72 aa5.16□□□□□ -1.58
AP001042.1-201ENST00000416842 PRR3P79522 188 aaKnown RBP5.16□□□□□ -1.58
AP001042.1-201ENST00000416842 MYCBP2O75592 4640 aa5.16□□□□□ -1.58
AP001042.1-201ENST00000416842 IGLV6-57P01721 117 aa5.15□□□□□ -1.59
AP001042.1-201ENST00000416842 RPL28P46779 137 aaKnown RBP5.15□□□□□ -1.59
AP001042.1-201ENST00000416842 KRTAP10-2P60368 255 aa5.15□□□□□ -1.59
AP001042.1-201ENST00000416842 XAGE1AQ9HD64 81 aa5.15□□□□□ -1.59
AP001042.1-201ENST00000416842 RPL13AP40429 203 aaKnown RBP5.14□□□□□ -1.59
AP001042.1-201ENST00000416842 Q5VSD8 79 aa5.14□□□□□ -1.59
AP001042.1-201ENST00000416842 NAA38Q9BRA0 125 aaKnown RBP5.14□□□□□ -1.59
AP001042.1-201ENST00000416842 SRRM2Q9UQ35 2752 aaKnown RBP5.14□□□□□ -1.59
AP001042.1-201ENST00000416842 M0R378 163 aa5.13□□□□□ -1.59
AP001042.1-201ENST00000416842 TRIAP1O43715 76 aa5.13□□□□□ -1.59
AP001042.1-201ENST00000416842 UBE2V1Q13404 147 aa5.13□□□□□ -1.59
AP001042.1-201ENST00000416842 GAGE2EQ4V326 116 aa5.13□□□□□ -1.59
AP001042.1-201ENST00000416842 TMEM126AQ9H061 195 aa5.13□□□□□ -1.59
AP001042.1-201ENST00000416842 GAGE2DQ9UEU5 116 aa5.13□□□□□ -1.59
AP001042.1-201ENST00000416842 K7EP34 96 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms