RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 KIAA1551Q9HCM1 1747 aa-0.83□□□□□ -2.54
ECHDC1-201ENST00000368287 DEFB135Q30KP9 77 aa-0.83□□□□□ -2.54
ECHDC1-201ENST00000368287 LELP1Q5T871 98 aa-0.83□□□□□ -2.54
ECHDC1-201ENST00000368287 EDC4Q6P2E9 1401 aaKnown RBP-0.83□□□□□ -2.54
ECHDC1-201ENST00000368287 PRDM15P57071 1507 aaPredicted RBP-0.84□□□□□ -2.54
ECHDC1-201ENST00000368287 I3L3M4 83 aa-0.84□□□□□ -2.54
ECHDC1-201ENST00000368287 GNGT1P63211 74 aa-0.84□□□□□ -2.54
ECHDC1-201ENST00000368287 PMCHL1Q16048 86 aa-0.84□□□□□ -2.54
ECHDC1-201ENST00000368287 TRGV9Q99603 122 aa-0.84□□□□□ -2.54
ECHDC1-201ENST00000368287 HERC2O95714 4834 aa-0.84□□□□□ -2.54
ECHDC1-201ENST00000368287 NCOA3Q9Y6Q9 1424 aa-0.84□□□□□ -2.54
ECHDC1-201ENST00000368287 CCDC141Q6ZP82 1450 aa-0.85□□□□□ -2.55
ECHDC1-201ENST00000368287 NRXN1Q9ULB1 1477 aa-0.85□□□□□ -2.55
ECHDC1-201ENST00000368287 LRRC37AA6NMS7 1700 aa-0.85□□□□□ -2.55
ECHDC1-201ENST00000368287 NDUFC1O43677 76 aa-0.85□□□□□ -2.55
ECHDC1-201ENST00000368287 KNL1Q8NG31 2342 aa-0.85□□□□□ -2.55
ECHDC1-201ENST00000368287 C14orf144Q96I85 54 aa-0.85□□□□□ -2.55
ECHDC1-201ENST00000368287 PMCHL2Q9BQD1 86 aa-0.85□□□□□ -2.55
ECHDC1-201ENST00000368287 COL14A1Q05707 1796 aaKnown RBP-0.85□□□□□ -2.55
ECHDC1-201ENST00000368287 ARMS2P0C7Q2 107 aa-0.86□□□□□ -2.55
ECHDC1-201ENST00000368287 CUX1P39880 1505 aa-0.86□□□□□ -2.55
ECHDC1-201ENST00000368287 ANKRD36BQ8N2N9 1353 aa-0.86□□□□□ -2.55
ECHDC1-201ENST00000368287 C5P01031 1676 aa-0.87□□□□□ -2.55
ECHDC1-201ENST00000368287 TMEM218A2RU14 115 aa-0.87□□□□□ -2.55
ECHDC1-201ENST00000368287 S100A10P60903 97 aa-0.87□□□□□ -2.55
ECHDC1-201ENST00000368287 EPG5Q9HCE0 2579 aa-0.87□□□□□ -2.55
ECHDC1-201ENST00000368287 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.87□□□□□ -2.559e-8■■■■□ 24.3
ECHDC1-201ENST00000368287 PKD1P98161 4303 aa-0.87□□□□□ -2.55
ECHDC1-201ENST00000368287 NBASA2RRP1 2371 aa-0.88□□□□□ -2.55
ECHDC1-201ENST00000368287 HIVEP1P15822 2718 aa-0.88□□□□□ -2.55
ECHDC1-201ENST00000368287 UQCRHP07919 91 aa-0.88□□□□□ -2.55
ECHDC1-201ENST00000368287 MRPL34Q9BQ48 92 aaKnown RBP-0.88□□□□□ -2.55
ECHDC1-201ENST00000368287 KIF20BQ96Q89 1820 aa-0.89□□□□□ -2.55
ECHDC1-201ENST00000368287 ATP6V1G2-DDX39BF2Z307 99 aa-0.89□□□□□ -2.55
ECHDC1-201ENST00000368287 S100PP25815 95 aa-0.89□□□□□ -2.55
ECHDC1-201ENST00000368287 DOPEY1Q5JWR5 2465 aa-0.91□□□□□ -2.55
ECHDC1-201ENST00000368287 TRAV30A0A087WSZ9 112 aa-0.91□□□□□ -2.56
ECHDC1-201ENST00000368287 MPC2O95563 127 aa-0.91□□□□□ -2.56
ECHDC1-201ENST00000368287 C9orf62Q8N4C0 152 aa-0.91□□□□□ -2.56
ECHDC1-201ENST00000368287 SERP2Q8N6R1 65 aa-0.91□□□□□ -2.56
ECHDC1-201ENST00000368287 PSENENQ9NZ42 101 aa-0.91□□□□□ -2.56
ECHDC1-201ENST00000368287 AP4S1Q9Y587 144 aa-0.91□□□□□ -2.56
ECHDC1-201ENST00000368287 STARD9Q9P2P6 4700 aa-0.91□□□□□ -2.56
ECHDC1-201ENST00000368287 USP9YO00507 2555 aaPredicted RBP-0.92□□□□□ -2.56
ECHDC1-201ENST00000368287 RAPGEF2Q9Y4G8 1499 aa-0.92□□□□□ -2.56
ECHDC1-201ENST00000368287 USH2AO75445 5202 aa-0.92□□□□□ -2.56
ECHDC1-201ENST00000368287 ATOX1O00244 68 aa-0.92□□□□□ -2.56
ECHDC1-201ENST00000368287 DEFB112Q30KQ8 113 aa-0.92□□□□□ -2.56
ECHDC1-201ENST00000368287 AKAP13Q12802 2813 aa-0.92□□□□□ -2.56
ECHDC1-201ENST00000368287 SAMD9Q5K651 1589 aa-0.92□□□□□ -2.56
ECHDC1-201ENST00000368287 ITPR3Q14573 2671 aa-0.92□□□□□ -2.56
ECHDC1-201ENST00000368287 DNAH6Q9C0G6 4158 aa-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 SONP18583 2426 aaKnown RBP-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 SPG11Q96JI7 2443 aa-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 SPTBN4Q9H254 2564 aa-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 PRRC2CQ9Y520 2896 aaKnown RBP-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 MYH4Q9Y623 1939 aa-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 TRBV7-7A0A0K0K1E9 115 aa-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 HEPN1Q6WQI6 88 aa-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 CRYBG1Q9Y4K1 1723 aa-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 TRANK1O15050 2925 aa-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 NBPF19A0A087WUL8 3843 aa-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 RGPD2P0DJD1 1756 aa-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 BCORQ6W2J9 1755 aa-0.93□□□□□ -2.56
ECHDC1-201ENST00000368287 TACC2O95359 2948 aa-0.94□□□□□ -2.56
ECHDC1-201ENST00000368287 SPTY2D1-AS1A0A0U1RR47 76 aa-0.95□□□□□ -2.56
ECHDC1-201ENST00000368287 F8WEM9 126 aa-0.95□□□□□ -2.56
ECHDC1-201ENST00000368287 SPRR2FQ96RM1 72 aa-0.95□□□□□ -2.56
ECHDC1-201ENST00000368287 FASNP49327 2511 aaKnown RBP-0.95□□□□□ -2.56
ECHDC1-201ENST00000368287 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.95□□□□□ -2.56
ECHDC1-201ENST00000368287 DNAH9Q9NYC9 4486 aa-0.95□□□□□ -2.56
ECHDC1-201ENST00000368287 PEG3Q9GZU2 1588 aa-0.96□□□□□ -2.56
ECHDC1-201ENST00000368287 FAT3Q8TDW7 4589 aa-0.96□□□□□ -2.56
ECHDC1-201ENST00000368287 IGLC2P0DOY2 106 aa-0.96□□□□□ -2.56
ECHDC1-201ENST00000368287 IGLC3P0DOY3 106 aa-0.96□□□□□ -2.56
ECHDC1-201ENST00000368287 FAUP35544 74 aaKnown RBP-0.96□□□□□ -2.56
ECHDC1-201ENST00000368287 RBP2P50120 134 aa-0.96□□□□□ -2.56
ECHDC1-201ENST00000368287 COL5A1-AS1Q5SY13 56 aa-0.96□□□□□ -2.56
ECHDC1-201ENST00000368287 WFDC13Q8IUB5 93 aa-0.96□□□□□ -2.56
ECHDC1-201ENST00000368287 TCEAL7Q9BRU2 100 aa-0.96□□□□□ -2.56
ECHDC1-201ENST00000368287 ABCC2Q92887 1545 aa-0.96□□□□□ -2.56
ECHDC1-201ENST00000368287 UBR4Q5T4S7 5183 aa-0.96□□□□□ -2.56
ECHDC1-201ENST00000368287 MYO18BQ8IUG5 2567 aa-0.97□□□□□ -2.56
ECHDC1-201ENST00000368287 HECTD1Q9ULT8 2610 aa-0.97□□□□□ -2.56
ECHDC1-201ENST00000368287 CLTCQ00610 1675 aaKnown RBP-0.97□□□□□ -2.56
ECHDC1-201ENST00000368287 FYCO1Q9BQS8 1478 aa-0.97□□□□□ -2.56
ECHDC1-201ENST00000368287 TNRC18O15417 2968 aaPredicted RBP-0.97□□□□□ -2.56
ECHDC1-201ENST00000368287 CCL22O00626 93 aa-0.97□□□□□ -2.56
ECHDC1-201ENST00000368287 LEPROTL1O95214 131 aa-0.97□□□□□ -2.56
ECHDC1-201ENST00000368287 ETDBQ3ZM63 59 aa-0.97□□□□□ -2.56
ECHDC1-201ENST00000368287 CNTLNQ9NXG0 1405 aa-0.98□□□□□ -2.57
ECHDC1-201ENST00000368287 LYSTQ99698 3801 aa-0.98□□□□□ -2.57
ECHDC1-201ENST00000368287 D6R8Y8 96 aa-0.98□□□□□ -2.57
ECHDC1-201ENST00000368287 NCMAPQ5T1S8 102 aa-0.98□□□□□ -2.57
ECHDC1-201ENST00000368287 MUSTN1Q8IVN3 82 aa-0.98□□□□□ -2.57
ECHDC1-201ENST00000368287 CDKN2A-AS1Q9UH64 79 aa-0.98□□□□□ -2.57
ECHDC1-201ENST00000368287 PKD1L3Q7Z443 1732 aa-0.98□□□□□ -2.57
ECHDC1-201ENST00000368287 TEX14Q8IWB6 1497 aa-0.99□□□□□ -2.57
ECHDC1-201ENST00000368287 ADAMTS12P58397 1594 aa-0.99□□□□□ -2.57
ECHDC1-201ENST00000368287 RYR3Q15413 4870 aa-0.99□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms