RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 IGKV2-28A0A075B6P5 120 aa10.04□□□□□ -0.8
SREBF1-202ENST00000355815 IGKV2D-28P01615 120 aa10.04□□□□□ -0.8
SREBF1-202ENST00000355815 CDC42SE2Q9NRR3 84 aa10.04□□□□□ -0.8
SREBF1-202ENST00000355815 FAM19A4Q96LR4 140 aa10.03□□□□□ -0.8
SREBF1-202ENST00000355815 SPENQ96T58 3664 aaKnown RBP10.03□□□□□ -0.8
SREBF1-202ENST00000355815 H0Y9J4 135 aa10.03□□□□□ -0.8
SREBF1-202ENST00000355815 LINC00337Q8N6G1 96 aa10.03□□□□□ -0.8
SREBF1-202ENST00000355815 CHCHD7Q9BUK0 85 aa10.02□□□□□ -0.8
SREBF1-202ENST00000355815 HIGD2AQ9BW72 106 aa10.02□□□□□ -0.8
SREBF1-202ENST00000355815 C9orf66Q5T8R8 295 aa10.02□□□□□ -0.81
SREBF1-202ENST00000355815 SERP1Q9Y6X1 66 aa10.02□□□□□ -0.81
SREBF1-202ENST00000355815 RPL28P46779 137 aaKnown RBP10.01□□□□□ -0.81
SREBF1-202ENST00000355815 PRO0628Q9UI54 55 aa10.01□□□□□ -0.81
SREBF1-202ENST00000355815 NOTCH1P46531 2555 aa10.01□□□□□ -0.81
SREBF1-202ENST00000355815 IGLV4-60A0A075B6I1 120 aa10.01□□□□□ -0.81
SREBF1-202ENST00000355815 TRAV7A0A075B6U4 112 aa10.01□□□□□ -0.81
SREBF1-202ENST00000355815 Q8N9L7 120 aa10.01□□□□□ -0.81
SREBF1-202ENST00000355815 AMELXQ99217 191 aa10.01□□□□□ -0.81
SREBF1-202ENST00000355815 LINC00959A0A1B0GUT2 108 aa10□□□□□ -0.81
SREBF1-202ENST00000355815 FAM218AQ96MZ4 157 aa10□□□□□ -0.81
SREBF1-202ENST00000355815 NBEAL1Q6ZS30 2694 aa10□□□□□ -0.81
SREBF1-202ENST00000355815 IGKV2-24A0A0C4DH68 120 aa9.99□□□□□ -0.81
SREBF1-202ENST00000355815 PMAIP1Q13794 54 aa9.99□□□□□ -0.81
SREBF1-202ENST00000355815 UNC79Q9P2D8 2635 aa9.99□□□□□ -0.81
SREBF1-202ENST00000355815 CHKB-CPT1BH3BT56 60 aa9.99□□□□□ -0.81
SREBF1-202ENST00000355815 SPART-AS1P0CW21 52 aa9.99□□□□□ -0.81
SREBF1-202ENST00000355815 A6NED7 52 aa9.98□□□□□ -0.81
SREBF1-202ENST00000355815 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
SREBF1-202ENST00000355815 UNQ6190/PRO20217Q6UXQ8 127 aa9.97□□□□□ -0.81
SREBF1-202ENST00000355815 Q8N814 137 aa9.97□□□□□ -0.81
SREBF1-202ENST00000355815 TRBV6-4A0A1B0GX49 114 aa9.97□□□□□ -0.81
SREBF1-202ENST00000355815 NDUFC1O43677 76 aa9.96□□□□□ -0.81
SREBF1-202ENST00000355815 LY6G6DO95868 133 aa9.96□□□□□ -0.81
SREBF1-202ENST00000355815 SBSPONQ8IVN8 264 aa9.96□□□□□ -0.82
SREBF1-202ENST00000355815 EIF4EBP3O60516 100 aaPredicted RBP9.94□□□□□ -0.82
SREBF1-202ENST00000355815 CRYGAP11844 174 aa9.94□□□□□ -0.82
SREBF1-202ENST00000355815 C11orf72Q8NBR9 251 aa9.94□□□□□ -0.82
SREBF1-202ENST00000355815 NDUFB1O75438 58 aa9.94□□□□□ -0.82
SREBF1-202ENST00000355815 IGKV4-1P06312 121 aa9.94□□□□□ -0.82
SREBF1-202ENST00000355815 MXRA5Q9NR99 2828 aa9.93□□□□□ -0.82
SREBF1-202ENST00000355815 TRBV7-6A0A0J9YX20 115 aa9.93□□□□□ -0.82
SREBF1-202ENST00000355815 A0A087WZ39 114 aa9.93□□□□□ -0.82
SREBF1-202ENST00000355815 SMCR5Q8TEV8 140 aa9.92□□□□□ -0.82
SREBF1-202ENST00000355815 RPL37AP8A6NKH3 93 aa9.91□□□□□ -0.82
SREBF1-202ENST00000355815 KLK9Q2XQG4 91 aa9.91□□□□□ -0.82
SREBF1-202ENST00000355815 Q6ZVQ6 151 aa9.91□□□□□ -0.82
SREBF1-202ENST00000355815 TMEM254Q8TBM7 123 aa9.91□□□□□ -0.82
SREBF1-202ENST00000355815 CYSRT1A8MQ03 144 aa9.9□□□□□ -0.82
SREBF1-202ENST00000355815 TRBV10-3A0A0K0K1G6 114 aa9.9□□□□□ -0.82
SREBF1-202ENST00000355815 ZNF73O43830 326 aaPredicted RBP9.9□□□□□ -0.82
SREBF1-202ENST00000355815 H3BQ85 93 aa9.9□□□□□ -0.82
SREBF1-202ENST00000355815 IGLV1-51P01701 117 aa9.89□□□□□ -0.83
SREBF1-202ENST00000355815 CD164L2Q6UWJ8 174 aa9.89□□□□□ -0.83
SREBF1-202ENST00000355815 OXLD1Q5BKU9 147 aa9.89□□□□□ -0.83
SREBF1-202ENST00000355815 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.89□□□□□ -0.83
SREBF1-202ENST00000355815 LINC01547P58512 204 aaPredicted RBP9.89□□□□□ -0.83
SREBF1-202ENST00000355815 DEFB116Q30KQ4 102 aa9.88□□□□□ -0.83
SREBF1-202ENST00000355815 F8WDY8 70 aa9.88□□□□□ -0.83
SREBF1-202ENST00000355815 LINC00208Q96KT6 92 aa9.88□□□□□ -0.83
SREBF1-202ENST00000355815 PRYO14603 147 aa9.87□□□□□ -0.83
SREBF1-202ENST00000355815 BEAN1Q3B7T3 259 aa9.87□□□□□ -0.83
SREBF1-202ENST00000355815 LINC00336Q6ZUF6 198 aa9.87□□□□□ -0.83
SREBF1-202ENST00000355815 COL6A5A8TX70 2615 aa9.87□□□□□ -0.83
SREBF1-202ENST00000355815 ATP5EP56381 51 aaPredicted RBP9.87□□□□□ -0.83
SREBF1-202ENST00000355815 C6orf223Q8N319 242 aa9.87□□□□□ -0.83
SREBF1-202ENST00000355815 APCP25054 2843 aa9.87□□□□□ -0.83
SREBF1-202ENST00000355815 STAB1Q9NY15 2570 aa9.86□□□□□ -0.83
SREBF1-202ENST00000355815 UBE2AP49459 152 aa9.86□□□□□ -0.83
SREBF1-202ENST00000355815 FHL2Q14192 279 aa9.86□□□□□ -0.83
SREBF1-202ENST00000355815 IL17DQ8TAD2 202 aa9.86□□□□□ -0.83
SREBF1-202ENST00000355815 A0A096LNT2 108 aa9.86□□□□□ -0.83
SREBF1-202ENST00000355815 LINC00575Q6W349 94 aa9.86□□□□□ -0.83
SREBF1-202ENST00000355815 IGHV4-30-4P0DP06 118 aa9.85□□□□□ -0.83
SREBF1-202ENST00000355815 RPS28P62857 69 aaKnown RBP9.85□□□□□ -0.83
SREBF1-202ENST00000355815 Q8IZM0 81 aa9.85□□□□□ -0.83
SREBF1-202ENST00000355815 PRR15LQ9BU68 103 aa9.84□□□□□ -0.83
SREBF1-202ENST00000355815 TRAV10A0A0B4J240 114 aa9.82□□□□□ -0.84
SREBF1-202ENST00000355815 FSHBP01225 129 aa9.81□□□□□ -0.84
SREBF1-202ENST00000355815 ESRGQ1W209 222 aa9.81□□□□□ -0.84
SREBF1-202ENST00000355815 SYCNQ0VAF6 134 aa9.8□□□□□ -0.84
SREBF1-202ENST00000355815 MUC7Q8TAX7 377 aa9.8□□□□□ -0.84
SREBF1-202ENST00000355815 WIPF1O43516 503 aa9.8□□□□□ -0.84
SREBF1-202ENST00000355815 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
SREBF1-202ENST00000355815 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.79□□□□□ -0.84
SREBF1-202ENST00000355815 LITAFQ99732 161 aa9.79□□□□□ -0.84
SREBF1-202ENST00000355815 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
SREBF1-202ENST00000355815 TM2D3Q9BRN9 247 aa9.79□□□□□ -0.84
SREBF1-202ENST00000355815 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.79□□□□□ -0.84
SREBF1-202ENST00000355815 C2orf48Q96LS8 159 aa9.77□□□□□ -0.84
SREBF1-202ENST00000355815 M0R378 163 aa9.77□□□□□ -0.85
SREBF1-202ENST00000355815 LINC01561Q8N1V8 128 aa9.77□□□□□ -0.85
SREBF1-202ENST00000355815 SPINK6Q6UWN8 80 aa9.76□□□□□ -0.85
SREBF1-202ENST00000355815 HIVEP1P15822 2718 aa9.76□□□□□ -0.85
SREBF1-202ENST00000355815 PCOTHQ58A44 107 aa9.76□□□□□ -0.85
SREBF1-202ENST00000355815 C1orf137Q5JT78 98 aa9.76□□□□□ -0.85
SREBF1-202ENST00000355815 NIPBLQ6KC79 2804 aaeCLIP9.75□□□□□ -0.85
SREBF1-202ENST00000355815 LYRM9A8MSI8 78 aa9.75□□□□□ -0.85
SREBF1-202ENST00000355815 IGHV3OR16-9A0A0B4J2B5 98 aa9.74□□□□□ -0.85
SREBF1-202ENST00000355815 SPATA3Q8NHX4 192 aa9.73□□□□□ -0.85
SREBF1-202ENST00000355815 COX17Q14061 63 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms