RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 UBE2DNLQ8IWF7 75 aa7.79□□□□□ -1.16
SSRP1-201ENST00000278412 J3KT08 172 aa7.78□□□□□ -1.16
SSRP1-201ENST00000278412 PRO1854Q9UHT4 67 aa7.78□□□□□ -1.16
SSRP1-201ENST00000278412 M0R2N4 97 aa7.77□□□□□ -1.17
SSRP1-201ENST00000278412 C15orf56Q8N910 161 aa7.77□□□□□ -1.17
SSRP1-201ENST00000278412 LOC107984640A0A0U1RRK4 108 aa7.77□□□□□ -1.17
SSRP1-201ENST00000278412 MIAQ16674 131 aa7.77□□□□□ -1.17
SSRP1-201ENST00000278412 FAM19A5Q7Z5A7 132 aaPredicted RBP7.77□□□□□ -1.17
SSRP1-201ENST00000278412 FAM240AA0A1B0GVK7 77 aa7.76□□□□□ -1.17
SSRP1-201ENST00000278412 A4D1N5 150 aa7.76□□□□□ -1.17
SSRP1-201ENST00000278412 C1orf43Q9BWL3 253 aa7.76□□□□□ -1.17
SSRP1-201ENST00000278412 SPAG11BQ08648 103 aa7.76□□□□□ -1.17
SSRP1-201ENST00000278412 C3orf22Q8N5N4 141 aa7.76□□□□□ -1.17
SSRP1-201ENST00000278412 SPANXDQ9BXN6 97 aa7.76□□□□□ -1.17
SSRP1-201ENST00000278412 TEX49A0A1B0GTD5 131 aa7.75□□□□□ -1.17
SSRP1-201ENST00000278412 RPS28P62857 69 aaKnown RBP7.75□□□□□ -1.17
SSRP1-201ENST00000278412 LINC01620Q4KN68 170 aa7.75□□□□□ -1.17
SSRP1-201ENST00000278412 SPANXCQ9NY87 97 aa7.75□□□□□ -1.17
SSRP1-201ENST00000278412 TRBV10-2A0A0K0K1G8 114 aa7.75□□□□□ -1.17
SSRP1-201ENST00000278412 NUPR2A6NF83 97 aa7.75□□□□□ -1.17
SSRP1-201ENST00000278412 UPK3BQ9BT76 320 aa7.75□□□□□ -1.17
SSRP1-201ENST00000278412 IBA57-AS1B1ANH7 110 aa7.74□□□□□ -1.17
SSRP1-201ENST00000278412 C9orf153Q5TBE3 101 aa7.74□□□□□ -1.17
SSRP1-201ENST00000278412 MIR7-3HGQ8N6C7 128 aa7.74□□□□□ -1.17
SSRP1-201ENST00000278412 IMUPQ9GZP8 106 aa7.74□□□□□ -1.17
SSRP1-201ENST00000278412 ATXN8Q156A1 80 aa7.74□□□□□ -1.17
SSRP1-201ENST00000278412 LINC00158P58513 81 aa7.74□□□□□ -1.17
SSRP1-201ENST00000278412 Q8IZM0 81 aa7.74□□□□□ -1.17
SSRP1-201ENST00000278412 OR13C6PQ8NH95 151 aa7.74□□□□□ -1.17
SSRP1-201ENST00000278412 H7C2G1 150 aa7.73□□□□□ -1.17
SSRP1-201ENST00000278412 UQCRQO14949 82 aa7.73□□□□□ -1.17
SSRP1-201ENST00000278412 Q8NDZ9 215 aa7.73□□□□□ -1.17
SSRP1-201ENST00000278412 SLPIP03973 132 aa7.73□□□□□ -1.17
SSRP1-201ENST00000278412 FUSP35637 526 aaKnown RBP eCLIP7.72□□□□□ -1.17
SSRP1-201ENST00000278412 PRR3P79522 188 aaKnown RBP7.72□□□□□ -1.17
SSRP1-201ENST00000278412 LINC00308Q8TCZ7 52 aa7.72□□□□□ -1.17
SSRP1-201ENST00000278412 MUC7Q8TAX7 377 aa7.72□□□□□ -1.17
SSRP1-201ENST00000278412 A0A0B4J2C4 111 aa7.71□□□□□ -1.17
SSRP1-201ENST00000278412 C6orf48Q9UBA6 75 aa7.71□□□□□ -1.17
SSRP1-201ENST00000278412 FAM236AA0A1B0GUQ0 79 aa7.71□□□□□ -1.18
SSRP1-201ENST00000278412 FAM236BA0A1B0GV22 79 aa7.71□□□□□ -1.18
SSRP1-201ENST00000278412 Q6ZRU5 148 aa7.71□□□□□ -1.18
SSRP1-201ENST00000278412 USP17L23D6RBM5 183 aa7.7□□□□□ -1.18
SSRP1-201ENST00000278412 H3BT86 120 aa7.7□□□□□ -1.18
SSRP1-201ENST00000278412 FRAS1Q86XX4 4008 aa7.69□□□□□ -1.18
SSRP1-201ENST00000278412 XAGE1AQ9HD64 81 aa7.69□□□□□ -1.18
SSRP1-201ENST00000278412 TRBV30A0A0K0K1B3 111 aa7.68□□□□□ -1.18
SSRP1-201ENST00000278412 ZNF561-AS1K7EIQ3 104 aa7.68□□□□□ -1.18
SSRP1-201ENST00000278412 CAMK2N2Q96S95 79 aa7.68□□□□□ -1.18
SSRP1-201ENST00000278412 CIRBPQ14011 172 aaKnown RBP7.67□□□□□ -1.18
SSRP1-201ENST00000278412 NBDYA0A0U1RRE5 68 aa7.67□□□□□ -1.18
SSRP1-201ENST00000278412 TIMM17BO60830 172 aa7.67□□□□□ -1.18
SSRP1-201ENST00000278412 CRYGAP11844 174 aa7.67□□□□□ -1.18
SSRP1-201ENST00000278412 LINC01561Q8N1V8 128 aa7.67□□□□□ -1.18
SSRP1-201ENST00000278412 HECTD4Q9Y4D8 3996 aa7.67□□□□□ -1.18
SSRP1-201ENST00000278412 KMT2CQ8NEZ4 4911 aaKnown RBP7.66□□□□□ -1.18
SSRP1-201ENST00000278412 IGKV2-28A0A075B6P5 120 aa7.66□□□□□ -1.18
SSRP1-201ENST00000278412 LY6G6CO95867 125 aa7.66□□□□□ -1.18
SSRP1-201ENST00000278412 IGKV2D-28P01615 120 aa7.66□□□□□ -1.18
SSRP1-201ENST00000278412 ACYP1P07311 99 aa7.66□□□□□ -1.18
SSRP1-201ENST00000278412 COX7CP15954 63 aa7.66□□□□□ -1.18
SSRP1-201ENST00000278412 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.65□□□□□ -1.18
SSRP1-201ENST00000278412 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.65□□□□□ -1.18
SSRP1-201ENST00000278412 SND1-IT1Q9HBX3 110 aa7.65□□□□□ -1.18
SSRP1-201ENST00000278412 SACSQ9NZJ4 4579 aa7.65□□□□□ -1.18
SSRP1-201ENST00000278412 GAGE2AQ6NT46 116 aa7.65□□□□□ -1.19
SSRP1-201ENST00000278412 LINC00337Q8N6G1 96 aa7.65□□□□□ -1.19
SSRP1-201ENST00000278412 DNAH6Q9C0G6 4158 aa7.64□□□□□ -1.19
SSRP1-201ENST00000278412 GVQW2A0A096LPI5 108 aaPredicted RBP7.64□□□□□ -1.19
SSRP1-201ENST00000278412 TRIAP1O43715 76 aa7.64□□□□□ -1.19
SSRP1-201ENST00000278412 C2orf48Q96LS8 159 aa7.64□□□□□ -1.19
SSRP1-201ENST00000278412 WWC2-AS2Q96NR7 200 aa7.64□□□□□ -1.19
SSRP1-201ENST00000278412 Q1RN00 199 aa7.64□□□□□ -1.19
SSRP1-201ENST00000278412 Q6ZRN7 208 aaPredicted RBP7.63□□□□□ -1.19
SSRP1-201ENST00000278412 PSCAO43653 123 aa7.63□□□□□ -1.19
SSRP1-201ENST00000278412 Q6ZRP5 223 aa7.63□□□□□ -1.19
SSRP1-201ENST00000278412 LINC00643Q86TS7 51 aa7.63□□□□□ -1.19
SSRP1-201ENST00000278412 CXCL5P42830 114 aa7.62□□□□□ -1.19
SSRP1-201ENST00000278412 NCR3O14931 201 aa7.62□□□□□ -1.19
SSRP1-201ENST00000278412 SDIM1Q6ZPB5 146 aa7.62□□□□□ -1.19
SSRP1-201ENST00000278412 SYCNQ0VAF6 134 aa7.61□□□□□ -1.19
SSRP1-201ENST00000278412 DNAH17Q9UFH2 4485 aa7.61□□□□□ -1.19
SSRP1-201ENST00000278412 DPH3Q96FX2 82 aa7.61□□□□□ -1.19
SSRP1-201ENST00000278412 ALMS1Q8TCU4 4167 aa7.61□□□□□ -1.19
SSRP1-201ENST00000278412 LST1O00453 97 aa7.6□□□□□ -1.19
SSRP1-201ENST00000278412 TMEM258P61165 79 aa7.6□□□□□ -1.19
SSRP1-201ENST00000278412 HIST1H4AP62805 103 aaKnown RBP7.6□□□□□ -1.19
SSRP1-201ENST00000278412 SMCR5Q8TEV8 140 aa7.6□□□□□ -1.19
SSRP1-201ENST00000278412 SRRM2Q9UQ35 2752 aaKnown RBP7.6□□□□□ -1.19
SSRP1-201ENST00000278412 FAM168BA1KXE4 195 aa7.6□□□□□ -1.19
SSRP1-201ENST00000278412 LRCOL1A6NCL2 159 aa7.59□□□□□ -1.19
SSRP1-201ENST00000278412 TRACP01848 142 aa7.59□□□□□ -1.19
SSRP1-201ENST00000278412 COX6CP09669 75 aa7.59□□□□□ -1.19
SSRP1-201ENST00000278412 Q5XG85 94 aa7.59□□□□□ -1.19
SSRP1-201ENST00000278412 LINC00476Q8WZB0 136 aa7.59□□□□□ -1.19
SSRP1-201ENST00000278412 FAT2Q9NYQ8 4349 aa7.59□□□□□ -1.2
SSRP1-201ENST00000278412 ATOX1O00244 68 aa7.58□□□□□ -1.2
SSRP1-201ENST00000278412 RPL18AQ02543 176 aaKnown RBP7.58□□□□□ -1.2
SSRP1-201ENST00000278412 C9orf129Q5T035 196 aaKnown RBP7.58□□□□□ -1.2
SSRP1-201ENST00000278412 Q6ZR54 194 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms