RNA–Protein interactions for RNA: ENST00000255476.2

RFXAP-201, Transcript of regulatory factor X associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFXAP, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-201ENST00000255476 KLK5Q9Y337 293 aaPredicted RBP14.13□□□□□ -0.15
RFXAP-201ENST00000255476 TRBV30A0A0K0K1B3 111 aa14.12□□□□□ -0.15
RFXAP-201ENST00000255476 PLECQ15149 4684 aaKnown RBP14.12□□□□□ -0.15
RFXAP-201ENST00000255476 UPK3BQ9BT76 320 aa14.12□□□□□ -0.15
RFXAP-201ENST00000255476 FBN3Q75N90 2809 aa14.11□□□□□ -0.15
RFXAP-201ENST00000255476 IBA57-AS1B1ANH7 110 aa14.1□□□□□ -0.15
RFXAP-201ENST00000255476 C9orf116Q5BN46 136 aaPredicted RBP14.1□□□□□ -0.15
RFXAP-201ENST00000255476 DNAH7Q8WXX0 4024 aa14.1□□□□□ -0.15
RFXAP-201ENST00000255476 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.09□□□□□ -0.15
RFXAP-201ENST00000255476 TRIAP1O43715 76 aa14.09□□□□□ -0.15
RFXAP-201ENST00000255476 C10orf25Q5T742 122 aa14.09□□□□□ -0.15
RFXAP-201ENST00000255476 Q1RN00 199 aa14.08□□□□□ -0.16
RFXAP-201ENST00000255476 HIGD2BQ4VC39 106 aa14.08□□□□□ -0.16
RFXAP-201ENST00000255476 UNQ6190/PRO20217Q6UXQ8 127 aa14.08□□□□□ -0.16
RFXAP-201ENST00000255476 STARD9Q9P2P6 4700 aa14.08□□□□□ -0.16
RFXAP-201ENST00000255476 DNAH1Q9P2D7 4330 aa14.07□□□□□ -0.16
RFXAP-201ENST00000255476 H3BT86 120 aa14.07□□□□□ -0.16
RFXAP-201ENST00000255476 CXCL5P42830 114 aa14.07□□□□□ -0.16
RFXAP-201ENST00000255476 UBE2DNLQ8IWF7 75 aa14.06□□□□□ -0.16
RFXAP-201ENST00000255476 NUPR2A6NF83 97 aa14.06□□□□□ -0.16
RFXAP-201ENST00000255476 C15orf56Q8N910 161 aa14.06□□□□□ -0.16
RFXAP-201ENST00000255476 TGP01266 2768 aa14.03□□□□□ -0.16
RFXAP-201ENST00000255476 KRTAP1-5Q9BYS1 174 aa14.03□□□□□ -0.16
RFXAP-201ENST00000255476 CASC10Q5T4H9 136 aa14.02□□□□□ -0.16
RFXAP-201ENST00000255476 IMUPQ9GZP8 106 aa14.02□□□□□ -0.16
RFXAP-201ENST00000255476 ZNF561-AS1K7EIQ3 104 aa14.01□□□□□ -0.17
RFXAP-201ENST00000255476 COPS9Q8WXC6 57 aa14.01□□□□□ -0.17
RFXAP-201ENST00000255476 FAM236AA0A1B0GUQ0 79 aa14.01□□□□□ -0.17
RFXAP-201ENST00000255476 FAM236BA0A1B0GV22 79 aa14.01□□□□□ -0.17
RFXAP-201ENST00000255476 SND1-IT1Q9HBX3 110 aa13.99□□□□□ -0.17
RFXAP-201ENST00000255476 C5orf47Q569G3 176 aa13.98□□□□□ -0.17
RFXAP-201ENST00000255476 C3orf22Q8N5N4 141 aa13.98□□□□□ -0.17
RFXAP-201ENST00000255476 C6orf48Q9UBA6 75 aa13.98□□□□□ -0.17
RFXAP-201ENST00000255476 LST1O00453 97 aa13.97□□□□□ -0.17
RFXAP-201ENST00000255476 CAMK2N2Q96S95 79 aa13.97□□□□□ -0.17
RFXAP-201ENST00000255476 COX17Q14061 63 aa13.97□□□□□ -0.17
RFXAP-201ENST00000255476 DNAH10Q8IVF4 4471 aa13.96□□□□□ -0.17
RFXAP-201ENST00000255476 C9orf153Q5TBE3 101 aa13.96□□□□□ -0.17
RFXAP-201ENST00000255476 IGKV2-28A0A075B6P5 120 aa13.95□□□□□ -0.18
RFXAP-201ENST00000255476 UQCRQO14949 82 aa13.95□□□□□ -0.18
RFXAP-201ENST00000255476 IGKV2D-28P01615 120 aa13.95□□□□□ -0.18
RFXAP-201ENST00000255476 CLEC2BQ92478 149 aa13.95□□□□□ -0.18
RFXAP-201ENST00000255476 LOC107984640A0A0U1RRK4 108 aa13.95□□□□□ -0.18
RFXAP-201ENST00000255476 COX6CP09669 75 aa13.95□□□□□ -0.18
RFXAP-201ENST00000255476 Q6ZRU5 148 aa13.95□□□□□ -0.18
RFXAP-201ENST00000255476 GVQW2A0A096LPI5 108 aaPredicted RBP13.93□□□□□ -0.18
RFXAP-201ENST00000255476 LECT2O14960 151 aa13.93□□□□□ -0.18
RFXAP-201ENST00000255476 ACYP1P07311 99 aa13.93□□□□□ -0.18
RFXAP-201ENST00000255476 RMI2Q96E14 147 aa13.93□□□□□ -0.18
RFXAP-201ENST00000255476 A0A1B0GX51 115 aa13.92□□□□□ -0.18
RFXAP-201ENST00000255476 LINC00337Q8N6G1 96 aa13.92□□□□□ -0.18
RFXAP-201ENST00000255476 USP17L23D6RBM5 183 aa13.92□□□□□ -0.18
RFXAP-201ENST00000255476 SMCR5Q8TEV8 140 aa13.91□□□□□ -0.18
RFXAP-201ENST00000255476 PRR3P79522 188 aaKnown RBP13.91□□□□□ -0.18
RFXAP-201ENST00000255476 C2orf48Q96LS8 159 aa13.91□□□□□ -0.18
RFXAP-201ENST00000255476 J3KT08 172 aa13.9□□□□□ -0.18
RFXAP-201ENST00000255476 SDIM1Q6ZPB5 146 aa13.9□□□□□ -0.18
RFXAP-201ENST00000255476 Q8NDZ9 215 aa13.89□□□□□ -0.19
RFXAP-201ENST00000255476 FAM19A5Q7Z5A7 132 aaPredicted RBP13.89□□□□□ -0.19
RFXAP-201ENST00000255476 LINC00643Q86TS7 51 aa13.88□□□□□ -0.19
RFXAP-201ENST00000255476 SLPIP03973 132 aa13.87□□□□□ -0.19
RFXAP-201ENST00000255476 XAGE1AQ9HD64 81 aa13.87□□□□□ -0.19
RFXAP-201ENST00000255476 VPS13DQ5THJ4 4388 aa13.87□□□□□ -0.19
RFXAP-201ENST00000255476 SYCNQ0VAF6 134 aa13.86□□□□□ -0.19
RFXAP-201ENST00000255476 TRAV13-2A0A0B4J235 113 aa13.85□□□□□ -0.19
RFXAP-201ENST00000255476 RPS28P62857 69 aaKnown RBP13.85□□□□□ -0.19
RFXAP-201ENST00000255476 NBDYA0A0U1RRE5 68 aa13.84□□□□□ -0.19
RFXAP-201ENST00000255476 COX7CP15954 63 aa13.84□□□□□ -0.19
RFXAP-201ENST00000255476 MUC7Q8TAX7 377 aa13.84□□□□□ -0.19
RFXAP-201ENST00000255476 OR13C6PQ8NH95 151 aa13.83□□□□□ -0.2
RFXAP-201ENST00000255476 CRYGAP11844 174 aa13.82□□□□□ -0.2
RFXAP-201ENST00000255476 PSCAO43653 123 aa13.82□□□□□ -0.2
RFXAP-201ENST00000255476 M0R2N4 97 aa13.81□□□□□ -0.2
RFXAP-201ENST00000255476 NCR3O14931 201 aa13.81□□□□□ -0.2
RFXAP-201ENST00000255476 NDUFC2-KCTD14E9PQ53 114 aa13.8□□□□□ -0.2
RFXAP-201ENST00000255476 Q6ZRP5 223 aa13.8□□□□□ -0.2
RFXAP-201ENST00000255476 NDUFC2O95298 119 aa13.8□□□□□ -0.2
RFXAP-201ENST00000255476 HIST1H4AP62805 103 aaKnown RBP13.8□□□□□ -0.2
RFXAP-201ENST00000255476 F8WDY8 70 aa13.79□□□□□ -0.2
RFXAP-201ENST00000255476 SMIM11BQ8TCY0 68 aa13.78□□□□□ -0.2
RFXAP-201ENST00000255476 GAGE2AQ6NT46 116 aa13.78□□□□□ -0.2
RFXAP-201ENST00000255476 KMT2AQ03164 3969 aa13.77□□□□□ -0.21
RFXAP-201ENST00000255476 RPL28P46779 137 aaKnown RBP13.75□□□□□ -0.21
RFXAP-201ENST00000255476 RPL18AQ02543 176 aaKnown RBP13.74□□□□□ -0.21
RFXAP-201ENST00000255476 WWC2-AS2Q96NR7 200 aa13.73□□□□□ -0.21
RFXAP-201ENST00000255476 C22orf24Q9Y442 160 aa13.73□□□□□ -0.21
RFXAP-201ENST00000255476 ATOX1O00244 68 aa13.73□□□□□ -0.21
RFXAP-201ENST00000255476 CYSTM1Q9H1C7 97 aa13.73□□□□□ -0.21
RFXAP-201ENST00000255476 C9orf129Q5T035 196 aaKnown RBP13.72□□□□□ -0.21
RFXAP-201ENST00000255476 hADV29S1A0JD25 119 aa13.71□□□□□ -0.21
RFXAP-201ENST00000255476 Q6ZRN7 208 aaPredicted RBP13.71□□□□□ -0.21
RFXAP-201ENST00000255476 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.7□□□□□ -0.22
RFXAP-201ENST00000255476 S100A7L2Q5SY68 101 aa13.7□□□□□ -0.22
RFXAP-201ENST00000255476 FAM218AQ96MZ4 157 aa13.69□□□□□ -0.22
RFXAP-201ENST00000255476 VPREB1P12018 145 aa13.69□□□□□ -0.22
RFXAP-201ENST00000255476 TRACP01848 142 aa13.68□□□□□ -0.22
RFXAP-201ENST00000255476 TLX1NBP0CAT3 122 aa13.68□□□□□ -0.22
RFXAP-201ENST00000255476 DPH3Q96FX2 82 aa13.68□□□□□ -0.22
RFXAP-201ENST00000255476 LRCOL1A6NCL2 159 aa13.67□□□□□ -0.22
RFXAP-201ENST00000255476 TMEM258P61165 79 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms