RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 BRI3O95415 125 aa8.17□□□□□ -1.1
SOX9-201ENST00000245479 FUSP35637 526 aaKnown RBP eCLIP8.17□□□□□ -1.1
SOX9-201ENST00000245479 TRBV6-8A0A0A6YYG3 113 aa8.16□□□□□ -1.1
SOX9-201ENST00000245479 SPAG11BQ08648 103 aa8.16□□□□□ -1.1
SOX9-201ENST00000245479 RMI2Q96E14 147 aa8.16□□□□□ -1.1
SOX9-201ENST00000245479 NDUFC1O43677 76 aa8.16□□□□□ -1.1
SOX9-201ENST00000245479 HIGD2BQ4VC39 106 aa8.15□□□□□ -1.1
SOX9-201ENST00000245479 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.1
SOX9-201ENST00000245479 Q8N814 137 aa8.15□□□□□ -1.1
SOX9-201ENST00000245479 PRO0628Q9UI54 55 aa8.15□□□□□ -1.1
SOX9-201ENST00000245479 BPY2O14599 106 aa8.14□□□□□ -1.11
SOX9-201ENST00000245479 MIFP14174 115 aa8.14□□□□□ -1.11
SOX9-201ENST00000245479 C9orf116Q5BN46 136 aaPredicted RBP8.14□□□□□ -1.11
SOX9-201ENST00000245479 CR1P17927 2039 aa8.14□□□□□ -1.11
SOX9-201ENST00000245479 SPATA3Q8NHX4 192 aa8.13□□□□□ -1.11
SOX9-201ENST00000245479 FHL2Q14192 279 aa8.13□□□□□ -1.11
SOX9-201ENST00000245479 NKAPP1Q8N9T2 125 aa8.13□□□□□ -1.11
SOX9-201ENST00000245479 LINC00959A0A1B0GUT2 108 aa8.13□□□□□ -1.11
SOX9-201ENST00000245479 C11orf72Q8NBR9 251 aa8.12□□□□□ -1.11
SOX9-201ENST00000245479 XAGE1AQ9HD64 81 aa8.12□□□□□ -1.11
SOX9-201ENST00000245479 LY6G6DO95868 133 aa8.12□□□□□ -1.11
SOX9-201ENST00000245479 COX7BP24311 80 aa8.12□□□□□ -1.11
SOX9-201ENST00000245479 IGLV5-45A0A087WSX0 123 aa8.11□□□□□ -1.11
SOX9-201ENST00000245479 H3BQ85 93 aa8.11□□□□□ -1.11
SOX9-201ENST00000245479 KLK12Q9UKR0 248 aa8.11□□□□□ -1.11
SOX9-201ENST00000245479 A0A096LNT2 108 aa8.11□□□□□ -1.11
SOX9-201ENST00000245479 ATP5EP56381 51 aaPredicted RBP8.11□□□□□ -1.11
SOX9-201ENST00000245479 OXLD1Q5BKU9 147 aa8.11□□□□□ -1.11
SOX9-201ENST00000245479 LINC01561Q8N1V8 128 aa8.11□□□□□ -1.11
SOX9-201ENST00000245479 CHCHD10Q8WYQ3 142 aaPredicted RBP8.1□□□□□ -1.11
SOX9-201ENST00000245479 CAMK2N2Q96S95 79 aa8.1□□□□□ -1.11
SOX9-201ENST00000245479 LRCOL1A6NCL2 159 aa8.1□□□□□ -1.11
SOX9-201ENST00000245479 FAM19A3Q7Z5A8 133 aa8.1□□□□□ -1.11
SOX9-201ENST00000245479 A0A087WZ39 114 aa8.09□□□□□ -1.11
SOX9-201ENST00000245479 RETNQ9HD89 108 aa8.09□□□□□ -1.11
SOX9-201ENST00000245479 C3orf84H3BNL1 204 aa8.09□□□□□ -1.11
SOX9-201ENST00000245479 PKD1L1Q8TDX9 2849 aa8.09□□□□□ -1.11
SOX9-201ENST00000245479 A8MTW9 85 aa8.09□□□□□ -1.12
SOX9-201ENST00000245479 TRBV7-6A0A0J9YX20 115 aa8.08□□□□□ -1.12
SOX9-201ENST00000245479 REG3AQ06141 175 aa8.08□□□□□ -1.12
SOX9-201ENST00000245479 PRR4Q16378 134 aa8.08□□□□□ -1.12
SOX9-201ENST00000245479 Q6ZVQ6 151 aa8.08□□□□□ -1.12
SOX9-201ENST00000245479 PRO0255Q9UI72 69 aa8.08□□□□□ -1.12
SOX9-201ENST00000245479 LINC01547P58512 204 aaPredicted RBP8.08□□□□□ -1.12
SOX9-201ENST00000245479 BEAN1Q3B7T3 259 aa8.08□□□□□ -1.12
SOX9-201ENST00000245479 IGKV2-28A0A075B6P5 120 aa8.07□□□□□ -1.12
SOX9-201ENST00000245479 IGKV2D-28P01615 120 aa8.07□□□□□ -1.12
SOX9-201ENST00000245479 Q8IZM0 81 aa8.07□□□□□ -1.12
SOX9-201ENST00000245479 SEC61GP60059 68 aa8.06□□□□□ -1.12
SOX9-201ENST00000245479 C2orf48Q96LS8 159 aa8.06□□□□□ -1.12
SOX9-201ENST00000245479 TRRAPQ9Y4A5 3859 aa8.06□□□□□ -1.12
SOX9-201ENST00000245479 LINC01600Q96MT4 127 aa8.06□□□□□ -1.12
SOX9-201ENST00000245479 CELA1Q9UNI1 258 aa8.05□□□□□ -1.12
SOX9-201ENST00000245479 TRBV10-3A0A0K0K1G6 114 aa8.05□□□□□ -1.12
SOX9-201ENST00000245479 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
SOX9-201ENST00000245479 KMT2BQ9UMN6 2715 aaPredicted RBP8.05□□□□□ -1.12
SOX9-201ENST00000245479 C9orf129Q5T035 196 aaKnown RBP8.04□□□□□ -1.12
SOX9-201ENST00000245479 SPTSSBQ8NFR3 76 aa8.04□□□□□ -1.12
SOX9-201ENST00000245479 MP68P56378 58 aa8.04□□□□□ -1.12
SOX9-201ENST00000245479 IGHV3OR16-9A0A0B4J2B5 98 aa8.03□□□□□ -1.12
SOX9-201ENST00000245479 CD164L2Q6UWJ8 174 aa8.03□□□□□ -1.12
SOX9-201ENST00000245479 LINC00336Q6ZUF6 198 aa8.03□□□□□ -1.12
SOX9-201ENST00000245479 C6orf223Q8N319 242 aa8.03□□□□□ -1.12
SOX9-201ENST00000245479 KLK9Q2XQG4 91 aa8.02□□□□□ -1.12
SOX9-201ENST00000245479 IGLV1-51P01701 117 aa8.02□□□□□ -1.13
SOX9-201ENST00000245479 ETDCA0A1B0GVM5 59 aa8.02□□□□□ -1.13
SOX9-201ENST00000245479 UNQ6190/PRO20217Q6UXQ8 127 aa8.02□□□□□ -1.13
SOX9-201ENST00000245479 PRYO14603 147 aa8.01□□□□□ -1.13
SOX9-201ENST00000245479 TRAV10A0A0B4J240 114 aa8.01□□□□□ -1.13
SOX9-201ENST00000245479 KRTAP1-3Q8IUG1 177 aa8.01□□□□□ -1.13
SOX9-201ENST00000245479 Q8N9L7 120 aa8.01□□□□□ -1.13
SOX9-201ENST00000245479 FAM30AQ9NZY2 134 aa8.01□□□□□ -1.13
SOX9-201ENST00000245479 UBE2BP63146 152 aa8□□□□□ -1.13
SOX9-201ENST00000245479 COX17Q14061 63 aa8□□□□□ -1.13
SOX9-201ENST00000245479 LINC00575Q6W349 94 aa8□□□□□ -1.13
SOX9-201ENST00000245479 IGKV2D-24A0A075B6R9 120 aa8□□□□□ -1.13
SOX9-201ENST00000245479 GIG44P09565 113 aaPredicted RBP8□□□□□ -1.13
SOX9-201ENST00000245479 ZNF73O43830 326 aaPredicted RBP7.99□□□□□ -1.13
SOX9-201ENST00000245479 MUC7Q8TAX7 377 aa7.99□□□□□ -1.13
SOX9-201ENST00000245479 FAM104AQ969W3 186 aa7.99□□□□□ -1.13
SOX9-201ENST00000245479 FSHBP01225 129 aa7.99□□□□□ -1.13
SOX9-201ENST00000245479 CYSTM1Q9H1C7 97 aa7.99□□□□□ -1.13
SOX9-201ENST00000245479 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.98□□□□□ -1.13
SOX9-201ENST00000245479 MRPL55Q7Z7F7 128 aaKnown RBP7.98□□□□□ -1.13
SOX9-201ENST00000245479 CYSRT1A8MQ03 144 aa7.98□□□□□ -1.13
SOX9-201ENST00000245479 ESRGQ1W209 222 aa7.98□□□□□ -1.13
SOX9-201ENST00000245479 KRTAP10-3P60369 221 aa7.98□□□□□ -1.13
SOX9-201ENST00000245479 TM2D3Q9BRN9 247 aa7.98□□□□□ -1.13
SOX9-201ENST00000245479 PSPHP1O15172 72 aa7.97□□□□□ -1.13
SOX9-201ENST00000245479 LINC00474Q9P2X8 69 aa7.97□□□□□ -1.13
SOX9-201ENST00000245479 NANOS2P60321 138 aaKnown RBP7.97□□□□□ -1.13
SOX9-201ENST00000245479 AKAP9Q99996 3911 aa7.96□□□□□ -1.13
SOX9-201ENST00000245479 TENM3Q9P273 2699 aa7.96□□□□□ -1.13
SOX9-201ENST00000245479 CXCL6P80162 114 aa7.96□□□□□ -1.14
SOX9-201ENST00000245479 WIPF1O43516 503 aa7.95□□□□□ -1.14
SOX9-201ENST00000245479 APOC4P55056 127 aa7.95□□□□□ -1.14
SOX9-201ENST00000245479 BCE1O60756 84 aa7.95□□□□□ -1.14
SOX9-201ENST00000245479 Q6ZQT0 140 aa7.95□□□□□ -1.14
SOX9-201ENST00000245479 IGHV4-30-4P0DP06 118 aa7.95□□□□□ -1.14
SOX9-201ENST00000245479 H7BZZ5 65 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms