RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 COX7B2Q8TF08 81 aa7.53□□□□□ -1.2
VPS18-201ENST00000220509 SND1-IT1Q9HBX3 110 aa7.53□□□□□ -1.2
VPS18-201ENST00000220509 Q6JHZ5 121 aa7.53□□□□□ -1.2
VPS18-201ENST00000220509 Q6ZSN1 163 aa7.53□□□□□ -1.2
VPS18-201ENST00000220509 EPM2AB3EWF7 344 aa7.52□□□□□ -1.2
VPS18-201ENST00000220509 LECT2O14960 151 aa7.52□□□□□ -1.2
VPS18-201ENST00000220509 MIR7-3HGQ8N6C7 128 aa7.52□□□□□ -1.2
VPS18-201ENST00000220509 ZNF73O43830 326 aaPredicted RBP7.52□□□□□ -1.21
VPS18-201ENST00000220509 NCR3O14931 201 aa7.52□□□□□ -1.21
VPS18-201ENST00000220509 KLK12Q9UKR0 248 aa7.52□□□□□ -1.21
VPS18-201ENST00000220509 UBE2D4Q9Y2X8 147 aa7.52□□□□□ -1.21
VPS18-201ENST00000220509 TRAV13-2A0A0B4J235 113 aa7.51□□□□□ -1.21
VPS18-201ENST00000220509 COX6A2Q02221 97 aa7.51□□□□□ -1.21
VPS18-201ENST00000220509 FAM229BQ4G0N7 80 aa7.51□□□□□ -1.21
VPS18-201ENST00000220509 KRTAP1-3Q8IUG1 177 aa7.51□□□□□ -1.21
VPS18-201ENST00000220509 M0R378 163 aa7.5□□□□□ -1.21
VPS18-201ENST00000220509 ESRGQ1W209 222 aa7.5□□□□□ -1.21
VPS18-201ENST00000220509 NSD1Q96L73 2696 aaPredicted RBP7.5□□□□□ -1.21
VPS18-201ENST00000220509 TM2D3Q9BRN9 247 aa7.5□□□□□ -1.21
VPS18-201ENST00000220509 ATP5EP56381 51 aaPredicted RBP7.49□□□□□ -1.21
VPS18-201ENST00000220509 ENHOQ6UWT2 76 aa7.49□□□□□ -1.21
VPS18-201ENST00000220509 FAM19A3Q7Z5A8 133 aa7.49□□□□□ -1.21
VPS18-201ENST00000220509 LINC00269Q8N2A0 174 aa7.49□□□□□ -1.21
VPS18-201ENST00000220509 TRBV6-8A0A0A6YYG3 113 aa7.49□□□□□ -1.21
VPS18-201ENST00000220509 IGLV1-51P01701 117 aa7.49□□□□□ -1.21
VPS18-201ENST00000220509 LITAFQ99732 161 aa7.49□□□□□ -1.21
VPS18-201ENST00000220509 RPL28P46779 137 aaKnown RBP7.48□□□□□ -1.21
VPS18-201ENST00000220509 IGKV2D-24A0A075B6R9 120 aa7.48□□□□□ -1.21
VPS18-201ENST00000220509 TRBV6-4A0A1B0GX49 114 aa7.48□□□□□ -1.21
VPS18-201ENST00000220509 KLK9Q2XQG4 91 aa7.48□□□□□ -1.21
VPS18-201ENST00000220509 FAM218AQ96MZ4 157 aa7.48□□□□□ -1.21
VPS18-201ENST00000220509 LINC00846Q9NV44 126 aa7.48□□□□□ -1.21
VPS18-201ENST00000220509 KMT2BQ9UMN6 2715 aaPredicted RBP7.47□□□□□ -1.21
VPS18-201ENST00000220509 NDUFS5O43920 106 aa7.47□□□□□ -1.21
VPS18-201ENST00000220509 UBE2DNLQ8IWF7 75 aa7.47□□□□□ -1.21
VPS18-201ENST00000220509 LINC01600Q96MT4 127 aa7.47□□□□□ -1.21
VPS18-201ENST00000220509 UBE2BP63146 152 aa7.47□□□□□ -1.21
VPS18-201ENST00000220509 HAMPP81172 84 aa7.47□□□□□ -1.21
VPS18-201ENST00000220509 TRAV7A0A075B6U4 112 aa7.46□□□□□ -1.21
VPS18-201ENST00000220509 FSHBP01225 129 aa7.46□□□□□ -1.21
VPS18-201ENST00000220509 CHCHD7Q9BUK0 85 aa7.46□□□□□ -1.22
VPS18-201ENST00000220509 NDUFA1O15239 70 aa7.45□□□□□ -1.22
VPS18-201ENST00000220509 PRB2P02812 416 aaPredicted RBP7.45□□□□□ -1.22
VPS18-201ENST00000220509 OVOL2Q9BRP0 275 aa7.45□□□□□ -1.22
VPS18-201ENST00000220509 LINC00242Q5T6M2 205 aa7.45□□□□□ -1.22
VPS18-201ENST00000220509 A0A087WYN8 130 aa7.45□□□□□ -1.22
VPS18-201ENST00000220509 NDUFC1O43677 76 aa7.45□□□□□ -1.22
VPS18-201ENST00000220509 IGHV4-28A0A0C4DH34 117 aa7.44□□□□□ -1.22
VPS18-201ENST00000220509 LYRM9A8MSI8 78 aa7.44□□□□□ -1.22
VPS18-201ENST00000220509 PSCAO43653 123 aa7.44□□□□□ -1.22
VPS18-201ENST00000220509 SPAG11BQ08648 103 aa7.44□□□□□ -1.22
VPS18-201ENST00000220509 CDC42SE2Q9NRR3 84 aa7.44□□□□□ -1.22
VPS18-201ENST00000220509 REG3AQ06141 175 aa7.43□□□□□ -1.22
VPS18-201ENST00000220509 C11orf72Q8NBR9 251 aa7.43□□□□□ -1.22
VPS18-201ENST00000220509 CAMK2N2Q96S95 79 aa7.43□□□□□ -1.22
VPS18-201ENST00000220509 MIFP14174 115 aa7.43□□□□□ -1.22
VPS18-201ENST00000220509 PDZD2O15018 2839 aa7.42□□□□□ -1.22
VPS18-201ENST00000220509 SMIM11BQ8TCY0 68 aa7.42□□□□□ -1.22
VPS18-201ENST00000220509 CHCHD10Q8WYQ3 142 aaPredicted RBP7.42□□□□□ -1.22
VPS18-201ENST00000220509 A8MUN3 132 aa7.42□□□□□ -1.22
VPS18-201ENST00000220509 IGLV4-60A0A075B6I1 120 aa7.41□□□□□ -1.22
VPS18-201ENST00000220509 Q6ZVQ6 151 aa7.41□□□□□ -1.22
VPS18-201ENST00000220509 HIGD2BQ4VC39 106 aa7.41□□□□□ -1.22
VPS18-201ENST00000220509 C9orf129Q5T035 196 aaKnown RBP7.41□□□□□ -1.22
VPS18-201ENST00000220509 SMIM1B2RUZ4 78 aa7.4□□□□□ -1.22
VPS18-201ENST00000220509 TENM1Q9UKZ4 2725 aa7.4□□□□□ -1.22
VPS18-201ENST00000220509 KLKP1Q107X0 134 aa7.4□□□□□ -1.22
VPS18-201ENST00000220509 LINC00337Q8N6G1 96 aa7.4□□□□□ -1.22
VPS18-201ENST00000220509 KRTAP1-1Q07627 177 aa7.4□□□□□ -1.23
VPS18-201ENST00000220509 NKAPP1Q8N9T2 125 aa7.4□□□□□ -1.23
VPS18-201ENST00000220509 ORMDL1Q9P0S3 153 aa7.4□□□□□ -1.23
VPS18-201ENST00000220509 IGHV4-30-4P0DP06 118 aa7.39□□□□□ -1.23
VPS18-201ENST00000220509 PRR3P79522 188 aaKnown RBP7.39□□□□□ -1.23
VPS18-201ENST00000220509 UBL5Q9BZL1 73 aa7.39□□□□□ -1.23
VPS18-201ENST00000220509 LINC00959A0A1B0GUT2 108 aa7.39□□□□□ -1.23
VPS18-201ENST00000220509 LINC00588Q9Y4M8 146 aa7.39□□□□□ -1.23
VPS18-201ENST00000220509 VWFP04275 2813 aa7.39□□□□□ -1.23
VPS18-201ENST00000220509 CHKB-CPT1BH3BT56 60 aa7.38□□□□□ -1.23
VPS18-201ENST00000220509 SCXQ7RTU7 201 aa7.38□□□□□ -1.23
VPS18-201ENST00000220509 H0YGX0 51 aa7.38□□□□□ -1.23
VPS18-201ENST00000220509 LCA10Q71F78 164 aa7.38□□□□□ -1.23
VPS18-201ENST00000220509 XAGE1AQ9HD64 81 aa7.37□□□□□ -1.23
VPS18-201ENST00000220509 NTM-AS1Q6ZSK4 140 aa7.36□□□□□ -1.23
VPS18-201ENST00000220509 UBE2AP49459 152 aa7.36□□□□□ -1.23
VPS18-201ENST00000220509 CCL18P55774 89 aa7.36□□□□□ -1.23
VPS18-201ENST00000220509 DEFB131BA0A096LNP1 70 aa7.35□□□□□ -1.23
VPS18-201ENST00000220509 IBA57-AS1B1ANH7 110 aa7.35□□□□□ -1.23
VPS18-201ENST00000220509 A8MU10 97 aa7.35□□□□□ -1.23
VPS18-201ENST00000220509 SPATA3Q8NHX4 192 aa7.35□□□□□ -1.23
VPS18-201ENST00000220509 DEFB105AQ8NG35 78 aa7.34□□□□□ -1.23
VPS18-201ENST00000220509 FBN1P35555 2871 aaKnown RBP7.34□□□□□ -1.23
VPS18-201ENST00000220509 KPRPQ5T749 579 aaPredicted RBP7.33□□□□□ -1.24
VPS18-201ENST00000220509 ATP5EP2Q5VTU8 51 aa7.33□□□□□ -1.24
VPS18-201ENST00000220509 FAM104AQ969W3 186 aa7.33□□□□□ -1.24
VPS18-201ENST00000220509 A0A0A0MQY5 61 aa7.32□□□□□ -1.24
VPS18-201ENST00000220509 ZNF706Q9Y5V0 76 aaPredicted RBP7.32□□□□□ -1.24
VPS18-201ENST00000220509 A8MTW9 85 aa7.32□□□□□ -1.24
VPS18-201ENST00000220509 NANOS2P60321 138 aaKnown RBP7.32□□□□□ -1.24
VPS18-201ENST00000220509 C9orf116Q5BN46 136 aaPredicted RBP7.32□□□□□ -1.24
VPS18-201ENST00000220509 C7orf65Q6ZTY9 151 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms