RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 A0A1B0GUV1 79 aa10.58□□□□□ -0.72
NDFIP2-201ENST00000218652 C10orf142B7Z368 130 aa10.57□□□□□ -0.72
NDFIP2-201ENST00000218652 KIF25-AS1Q9Y6Z4 181 aa10.57□□□□□ -0.72
NDFIP2-201ENST00000218652 H0Y9P7 68 aa10.56□□□□□ -0.72
NDFIP2-201ENST00000218652 USP34Q70CQ2 3546 aa10.56□□□□□ -0.72
NDFIP2-201ENST00000218652 LINC01556Q5JQF7 62 aa10.56□□□□□ -0.72
NDFIP2-201ENST00000218652 Q6ZRU5 148 aa10.56□□□□□ -0.72
NDFIP2-201ENST00000218652 Q8N2B8 174 aa10.56□□□□□ -0.72
NDFIP2-201ENST00000218652 LTBP2Q14767 1821 aa10.55□□□□□ -0.72
NDFIP2-201ENST00000218652 PRLHP81277 87 aa10.55□□□□□ -0.72
NDFIP2-201ENST00000218652 CEP192Q8TEP8 1941 aa10.54□□□□□ -0.72
NDFIP2-201ENST00000218652 LYPD5Q6UWN5 251 aa10.53□□□□□ -0.72
NDFIP2-201ENST00000218652 SBSPONQ8IVN8 264 aa10.53□□□□□ -0.72
NDFIP2-201ENST00000218652 Q9UF83 564 aa10.52□□□□□ -0.72
NDFIP2-201ENST00000218652 IGHV3OR16-9A0A0B4J2B5 98 aa10.52□□□□□ -0.73
NDFIP2-201ENST00000218652 CRYGAP11844 174 aa10.51□□□□□ -0.73
NDFIP2-201ENST00000218652 SMCPP49901 116 aaPredicted RBP10.5□□□□□ -0.73
NDFIP2-201ENST00000218652 C2orf48Q96LS8 159 aa10.5□□□□□ -0.73
NDFIP2-201ENST00000218652 CHD9Q3L8U1 2897 aa10.5□□□□□ -0.73
NDFIP2-201ENST00000218652 LRP4O75096 1905 aa10.5□□□□□ -0.73
NDFIP2-201ENST00000218652 RAI1Q7Z5J4 1906 aaPredicted RBP10.5□□□□□ -0.73
NDFIP2-201ENST00000218652 HCG22E2RYF7 251 aa10.49□□□□□ -0.73
NDFIP2-201ENST00000218652 REV3LO60673 3130 aa10.49□□□□□ -0.73
NDFIP2-201ENST00000218652 IGLV5-39A0A0G2JS06 123 aa10.49□□□□□ -0.73
NDFIP2-201ENST00000218652 LINC00315P59091 139 aa10.48□□□□□ -0.73
NDFIP2-201ENST00000218652 MYO15AQ9UKN7 3530 aa10.47□□□□□ -0.73
NDFIP2-201ENST00000218652 AKAP13Q12802 2813 aa10.47□□□□□ -0.73
NDFIP2-201ENST00000218652 IGLV5-52A0A0A0MRZ9 124 aa10.47□□□□□ -0.73
NDFIP2-201ENST00000218652 C1orf64Q8NEQ6 169 aa10.46□□□□□ -0.73
NDFIP2-201ENST00000218652 SPATA3Q8NHX4 192 aa10.46□□□□□ -0.74
NDFIP2-201ENST00000218652 NUPR2A6NF83 97 aa10.45□□□□□ -0.74
NDFIP2-201ENST00000218652 KIAA0087Q14695 138 aa10.45□□□□□ -0.74
NDFIP2-201ENST00000218652 C11orf72Q8NBR9 251 aa10.45□□□□□ -0.74
NDFIP2-201ENST00000218652 C22orf24Q9Y442 160 aa10.45□□□□□ -0.74
NDFIP2-201ENST00000218652 SMCR5Q8TEV8 140 aa10.45□□□□□ -0.74
NDFIP2-201ENST00000218652 PTPRSQ13332 1948 aa10.45□□□□□ -0.74
NDFIP2-201ENST00000218652 PRO0461Q9UI25 63 aa10.45□□□□□ -0.74
NDFIP2-201ENST00000218652 ADAMTS20P59510 1910 aa10.45□□□□□ -0.74
NDFIP2-201ENST00000218652 hDV103S1A0JD37 113 aa10.44□□□□□ -0.74
NDFIP2-201ENST00000218652 SMIM29Q86T20 159 aa10.44□□□□□ -0.74
NDFIP2-201ENST00000218652 CXCL6P80162 114 aa10.43□□□□□ -0.74
NDFIP2-201ENST00000218652 IGKV2D-30A0A075B6S6 120 aa10.42□□□□□ -0.74
NDFIP2-201ENST00000218652 IGKV2-30P06310 120 aa10.42□□□□□ -0.74
NDFIP2-201ENST00000218652 FAM218AQ96MZ4 157 aa10.42□□□□□ -0.74
NDFIP2-201ENST00000218652 PTPRBP23467 1997 aa10.41□□□□□ -0.74
NDFIP2-201ENST00000218652 VPS13AQ96RL7 3174 aa10.41□□□□□ -0.74
NDFIP2-201ENST00000218652 STAB1Q9NY15 2570 aa10.41□□□□□ -0.74
NDFIP2-201ENST00000218652 LINC01561Q8N1V8 128 aa10.41□□□□□ -0.74
NDFIP2-201ENST00000218652 CENPEQ02224 2701 aa10.4□□□□□ -0.74
NDFIP2-201ENST00000218652 C16orf95Q9H693 158 aa10.38□□□□□ -0.75
NDFIP2-201ENST00000218652 LAMA1P25391 3075 aa10.38□□□□□ -0.75
NDFIP2-201ENST00000218652 F8WDY8 70 aa10.37□□□□□ -0.75
NDFIP2-201ENST00000218652 LINC00167Q96N53 147 aa10.37□□□□□ -0.75
NDFIP2-201ENST00000218652 PRO0628Q9UI54 55 aa10.37□□□□□ -0.75
NDFIP2-201ENST00000218652 C6orf48Q9UBA6 75 aa10.35□□□□□ -0.75
NDFIP2-201ENST00000218652 C4orf26Q17RF5 130 aa10.34□□□□□ -0.75
NDFIP2-201ENST00000218652 FLG2Q5D862 2391 aaPredicted RBP10.34□□□□□ -0.75
NDFIP2-201ENST00000218652 C1orf134Q5TEV5 83 aa10.34□□□□□ -0.75
NDFIP2-201ENST00000218652 LIMD2Q9BT23 127 aa10.34□□□□□ -0.75
NDFIP2-201ENST00000218652 COL5A1P20908 1838 aaPredicted RBP10.34□□□□□ -0.75
NDFIP2-201ENST00000218652 LINC01546A6NGU7 62 aa10.34□□□□□ -0.75
NDFIP2-201ENST00000218652 SPTBN5Q9NRC6 3674 aaKnown RBP10.33□□□□□ -0.76
NDFIP2-201ENST00000218652 IGLV5-45A0A087WSX0 123 aa10.32□□□□□ -0.76
NDFIP2-201ENST00000218652 FHL3Q13643 280 aa10.31□□□□□ -0.76
NDFIP2-201ENST00000218652 SPAG11AQ6PDA7 123 aa10.31□□□□□ -0.76
NDFIP2-201ENST00000218652 COL6A3P12111 3177 aa10.31□□□□□ -0.76
NDFIP2-201ENST00000218652 SPACA4Q8TDM5 124 aa10.3□□□□□ -0.76
NDFIP2-201ENST00000218652 FAM19A4Q96LR4 140 aa10.3□□□□□ -0.76
NDFIP2-201ENST00000218652 TRANK1O15050 2925 aa10.3□□□□□ -0.76
NDFIP2-201ENST00000218652 MOBPQ13875 183 aa10.3□□□□□ -0.76
NDFIP2-201ENST00000218652 ITPR3Q14573 2671 aa10.29□□□□□ -0.76
NDFIP2-201ENST00000218652 A0A1B0GU69 56 aa10.29□□□□□ -0.76
NDFIP2-201ENST00000218652 TM2D3Q9BRN9 247 aa10.29□□□□□ -0.76
NDFIP2-201ENST00000218652 FRYLO94915 3013 aa10.27□□□□□ -0.77
NDFIP2-201ENST00000218652 Q8NBF4 154 aa10.27□□□□□ -0.77
NDFIP2-201ENST00000218652 Q6ZQT0 140 aa10.27□□□□□ -0.77
NDFIP2-201ENST00000218652 WDFY4Q6ZS81 3184 aa10.26□□□□□ -0.77
NDFIP2-201ENST00000218652 RPS28P62857 69 aaKnown RBP10.25□□□□□ -0.77
NDFIP2-201ENST00000218652 FSHBP01225 129 aa10.25□□□□□ -0.77
NDFIP2-201ENST00000218652 LINC00476Q8WZB0 136 aa10.24□□□□□ -0.77
NDFIP2-201ENST00000218652 ELOF1P60002 83 aaKnown RBP10.24□□□□□ -0.77
NDFIP2-201ENST00000218652 C7orf65Q6ZTY9 151 aa10.24□□□□□ -0.77
NDFIP2-201ENST00000218652 BCE1O60756 84 aa10.24□□□□□ -0.77
NDFIP2-201ENST00000218652 CFAP54Q96N23 3096 aa10.23□□□□□ -0.77
NDFIP2-201ENST00000218652 ST20-AS1Q8NBB2 130 aa10.23□□□□□ -0.77
NDFIP2-201ENST00000218652 TP53AIP1Q9HCN2 124 aa10.23□□□□□ -0.77
NDFIP2-201ENST00000218652 NHLRC4P0CG21 123 aaPredicted RBP10.22□□□□□ -0.77
NDFIP2-201ENST00000218652 IGLV8-61A0A075B6I0 122 aa10.22□□□□□ -0.77
NDFIP2-201ENST00000218652 ACYP2P14621 99 aa10.22□□□□□ -0.77
NDFIP2-201ENST00000218652 TRAV22A0A0B4J277 110 aa10.21□□□□□ -0.78
NDFIP2-201ENST00000218652 ATP11AUNQ6ZP68 121 aa10.21□□□□□ -0.78
NDFIP2-201ENST00000218652 Q6ZRX8 168 aa10.21□□□□□ -0.78
NDFIP2-201ENST00000218652 MDFIQ99750 246 aa10.21□□□□□ -0.78
NDFIP2-201ENST00000218652 SETXQ7Z333 2677 aaKnown RBP10.2□□□□□ -0.78
NDFIP2-201ENST00000218652 RPL37AP61513 92 aaKnown RBP10.2□□□□□ -0.78
NDFIP2-201ENST00000218652 PHF5AQ7RTV0 110 aaKnown RBP10.2□□□□□ -0.78
NDFIP2-201ENST00000218652 MUC3AQ02505 3323 aa10.2□□□□□ -0.78
NDFIP2-201ENST00000218652 COL4A2P08572 1712 aa10.2□□□□□ -0.78
NDFIP2-201ENST00000218652 LOC110117498A0A087WWA1 95 aa10.17□□□□□ -0.78
NDFIP2-201ENST00000218652 CELSR3Q9NYQ7 3312 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms