RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 MIAQ16674 131 aa3.51□□□□□ -1.85
CDH17-201ENST00000027335 TRBV6-8A0A0A6YYG3 113 aa3.51□□□□□ -1.85
CDH17-201ENST00000027335 LCA10Q71F78 164 aa3.51□□□□□ -1.85
CDH17-201ENST00000027335 LST1O00453 97 aa3.51□□□□□ -1.85
CDH17-201ENST00000027335 PSCAO43653 123 aa3.51□□□□□ -1.85
CDH17-201ENST00000027335 Q75L30 129 aa3.51□□□□□ -1.85
CDH17-201ENST00000027335 IGLV1-51P01701 117 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 SMCPP49901 116 aaPredicted RBP3.5□□□□□ -1.85
CDH17-201ENST00000027335 COX6A2Q02221 97 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 C6orf223Q8N319 242 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 FAM30AQ9NZY2 134 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 IGHV4-28A0A0C4DH34 117 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 TEX49A0A1B0GTD5 131 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 TRBV6-4A0A1B0GX49 114 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 H0Y9J4 135 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 NCR3O14931 201 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 LECT2O14960 151 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 ACYP1P07311 99 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 SPAG11BQ08648 103 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 HIGD2BQ4VC39 106 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 LINC00242Q5T6M2 205 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 FP248Q71RG6 208 aaPredicted RBP3.5□□□□□ -1.85
CDH17-201ENST00000027335 LINC00308Q8TCZ7 52 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 CHCHD7Q9BUK0 85 aa3.5□□□□□ -1.85
CDH17-201ENST00000027335 UBE2D1P51668 147 aa3.49□□□□□ -1.85
CDH17-201ENST00000027335 ATP5EP56381 51 aaPredicted RBP3.49□□□□□ -1.85
CDH17-201ENST00000027335 RBM3P98179 157 aaKnown RBP3.49□□□□□ -1.85
CDH17-201ENST00000027335 REG3AQ06141 175 aa3.49□□□□□ -1.85
CDH17-201ENST00000027335 CAMK2N2Q96S95 79 aa3.49□□□□□ -1.85
CDH17-201ENST00000027335 VPS13CQ709C8 3753 aa3.49□□□□□ -1.85
CDH17-201ENST00000027335 IGLV4-60A0A075B6I1 120 aa3.49□□□□□ -1.85
CDH17-201ENST00000027335 UBE2D3P61077 147 aa3.49□□□□□ -1.85
CDH17-201ENST00000027335 UBE2D2P62837 147 aa3.49□□□□□ -1.85
CDH17-201ENST00000027335 ZFHX3Q15911 3703 aa3.49□□□□□ -1.85
CDH17-201ENST00000027335 ADAMTSL4-AS1Q5T5F5 129 aa3.49□□□□□ -1.85
CDH17-201ENST00000027335 Q8N2B8 174 aa3.49□□□□□ -1.85
CDH17-201ENST00000027335 CHCHD10Q8WYQ3 142 aaPredicted RBP3.49□□□□□ -1.85
CDH17-201ENST00000027335 CDC42SE2Q9NRR3 84 aa3.49□□□□□ -1.85
CDH17-201ENST00000027335 A0A0B4J2C4 111 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
CDH17-201ENST00000027335 UBE2BP63146 152 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 LINC00643Q86TS7 51 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 NKAPP1Q8N9T2 125 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 XAGE1AQ9HD64 81 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 TRBV10-2A0A0K0K1G8 114 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 SLPIP03973 132 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 PLA2G1BP04054 148 aaKnown RBP3.48□□□□□ -1.85
CDH17-201ENST00000027335 C11orf72Q8NBR9 251 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 NDUFA1O15239 70 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 C6orf99Q4VX62 202 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 LINC00528Q8N1L1 170 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 DEFB105AQ8NG35 78 aa3.48□□□□□ -1.85
CDH17-201ENST00000027335 IGHV4-30-4P0DP06 118 aa3.47□□□□□ -1.85
CDH17-201ENST00000027335 KRTAP10-3P60369 221 aa3.47□□□□□ -1.85
CDH17-201ENST00000027335 HAMPP81172 84 aa3.47□□□□□ -1.85
CDH17-201ENST00000027335 LINC00959A0A1B0GUT2 108 aa3.47□□□□□ -1.85
CDH17-201ENST00000027335 SMIM1B2RUZ4 78 aa3.47□□□□□ -1.85
CDH17-201ENST00000027335 FHL2Q14192 279 aa3.47□□□□□ -1.85
CDH17-201ENST00000027335 KLK9Q2XQG4 91 aa3.47□□□□□ -1.85
CDH17-201ENST00000027335 AMELXQ99217 191 aa3.47□□□□□ -1.85
CDH17-201ENST00000027335 IGKV3D-7A0A0C4DH55 119 aa3.46□□□□□ -1.86
CDH17-201ENST00000027335 FUSP35637 526 aaKnown RBP eCLIP3.46□□□□□ -1.86
CDH17-201ENST00000027335 NTM-AS1Q6ZSK4 140 aa3.46□□□□□ -1.86
CDH17-201ENST00000027335 ZNF706Q9Y5V0 76 aaPredicted RBP3.46□□□□□ -1.86
CDH17-201ENST00000027335 DEFB131BA0A096LNP1 70 aa3.46□□□□□ -1.86
CDH17-201ENST00000027335 KRTAP24-1Q3LI83 254 aa3.46□□□□□ -1.86
CDH17-201ENST00000027335 C9orf116Q5BN46 136 aaPredicted RBP3.46□□□□□ -1.86
CDH17-201ENST00000027335 UPK3BQ9BT76 320 aa3.46□□□□□ -1.86
CDH17-201ENST00000027335 ORMDL1Q9P0S3 153 aa3.46□□□□□ -1.86
CDH17-201ENST00000027335 PRR3P79522 188 aaKnown RBP3.46□□□□□ -1.86
CDH17-201ENST00000027335 ZNF575Q86XF7 245 aa3.46□□□□□ -1.86
CDH17-201ENST00000027335 C14orf132Q9NPU4 83 aa3.46□□□□□ -1.86
CDH17-201ENST00000027335 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
CDH17-201ENST00000027335 H0YGX0 51 aa3.45□□□□□ -1.86
CDH17-201ENST00000027335 MIFP14174 115 aa3.45□□□□□ -1.86
CDH17-201ENST00000027335 CCL18P55774 89 aa3.45□□□□□ -1.86
CDH17-201ENST00000027335 TRBV30A0A0K0K1B3 111 aa3.45□□□□□ -1.86
CDH17-201ENST00000027335 LINC01546A6NGU7 62 aa3.45□□□□□ -1.86
CDH17-201ENST00000027335 CCKP06307 115 aa3.45□□□□□ -1.86
CDH17-201ENST00000027335 LINC00313P59037 77 aa3.45□□□□□ -1.86
CDH17-201ENST00000027335 PHF5AQ7RTV0 110 aaKnown RBP3.45□□□□□ -1.86
CDH17-201ENST00000027335 KRTAP9-2Q9BYQ4 174 aa3.45□□□□□ -1.86
CDH17-201ENST00000027335 KPRPQ5T749 579 aaPredicted RBP3.45□□□□□ -1.86
CDH17-201ENST00000027335 Q8N3U1 123 aa3.45□□□□□ -1.86
CDH17-201ENST00000027335 MPLKIPQ8TAP9 179 aa3.45□□□□□ -1.86
CDH17-201ENST00000027335 FBN1P35555 2871 aaKnown RBP3.44□□□□□ -1.86
CDH17-201ENST00000027335 IBA57-AS1B1ANH7 110 aa3.44□□□□□ -1.86
CDH17-201ENST00000027335 UBE2AP49459 152 aa3.44□□□□□ -1.86
CDH17-201ENST00000027335 NANOS2P60321 138 aaKnown RBP3.44□□□□□ -1.86
CDH17-201ENST00000027335 CXCL6P80162 114 aa3.44□□□□□ -1.86
CDH17-201ENST00000027335 LINC00588Q9Y4M8 146 aa3.44□□□□□ -1.86
CDH17-201ENST00000027335 C7orf65Q6ZTY9 151 aa3.44□□□□□ -1.86
CDH17-201ENST00000027335 LINC00337Q8N6G1 96 aa3.44□□□□□ -1.86
CDH17-201ENST00000027335 C19orf73Q9NVV2 129 aa3.44□□□□□ -1.86
CDH17-201ENST00000027335 TENM1Q9UKZ4 2725 aa3.43□□□□□ -1.86
CDH17-201ENST00000027335 IGHV3OR16-9A0A0B4J2B5 98 aa3.43□□□□□ -1.86
CDH17-201ENST00000027335 UNQ6190/PRO20217Q6UXQ8 127 aa3.43□□□□□ -1.86
CDH17-201ENST00000027335 KRTAP4-8Q9BYQ9 185 aa3.43□□□□□ -1.86
CDH17-201ENST00000027335 UBL5Q9BZL1 73 aa3.43□□□□□ -1.86
CDH17-201ENST00000027335 CYSTM1Q9H1C7 97 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms