RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Srrm2Q8BTI8 2703 aaKnown RBP6.74□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 P01787 123 aa6.74□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Runx1Q03347 451 aa6.74□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 PgpQ8CHP8 321 aa6.74□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Fbxo24Q9D417 589 aa6.74□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Dynlrb2Q9DAJ5 96 aa6.74□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 IgipA0A1B0GR74 53 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Cyb561d1A2AE42 229 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Phxr2P15972 65 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Ube2l3P68037 154 aaKnown RBP6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Tmem205Q91XE8 189 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Tctex1d1Q9D5I4 173 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Scp2d1Q9DAH1 156 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Ighv14-1A0A075B5R4 117 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Trav9d-1A0A075B699 112 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Igkv4-59A0A0B4J1I8 117 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Olfr1291-ps1A0A286YE47 326 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Irf2bp2E9Q1P8 570 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 A930009A15RikG3UYI6 118 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Gm26965M0QWH4 86 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 P01792 123 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Cxcl2P10889 100 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Rbm38Q62176 237 aaKnown RBP6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Jpt2Q6PGH2 190 aaKnown RBP6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Scgb2b2Q6UGQ3 114 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Ndfip1Q8R0W6 221 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Olfr1445Q8VFW9 314 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Olfr477Q8VGI6 310 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Tmem160Q9D938 188 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Rhox4bQ9JI43 205 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Cbln1Q9R171 193 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Tsc22d3Q9Z2S7 137 aa6.73□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Sult1a1P52840 291 aa6.72□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Cd200r3Q5UKY4 296 aa6.72□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Rph3alQ768S4 302 aa6.72□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Olfr553Q7TRS6 326 aa6.72□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 H1fxQ80ZM5 188 aa6.72□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 A130051J06RikQ8CAU1 227 aa6.72□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Olfr1009Q8VFK1 314 aa6.72□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Mrpl33Q9CQP0 65 aa6.72□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Vsig2Q9Z109 328 aa6.72□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Ighv1-80A0A075B5Y3 117 aa6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Trav7-1A0A0G2JEV5 112 aa6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Olfr749E9Q438 313 aa6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Ssty1P13675 232 aa6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Fhl1P97447 280 aaKnown RBP6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Tmem167bQ80X45 74 aa6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Fam110dQ80X91 271 aa6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Cox19Q8K0C8 92 aa6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Olfr830Q8VFJ5 315 aa6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Olfr159Q9QZ19 319 aa6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Gpr132Q9Z282 382 aa6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Hspg2Q05793 3707 aaKnown RBP6.71□□□□□ -1.33
Ccdc28a-201ENSMUST00000052648 Ighv7-4A0A0A6YXL5 121 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr609E9Q4X7 319 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 LfngO09010 378 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 P03980 138 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Il3raP26952 396 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Cd81P35762 236 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Ripply2Q2WG76 128 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Pgam5Q8BX10 288 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 CenpxQ8C4X1 78 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr1412Q8VET3 321 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Cma2Q91VB1 246 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 1700029F12RikQ9CRB4 147 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Vmn1r63Q9EPT1 300 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 ApcQ61315 2845 aa6.71□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Igkv4-57-1A0A075B5M4 119 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Trav21-dv12A0A075B6C4 109 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Ighv1-67A0A0G2JFN9 117 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Csn2P10598 231 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Nat1P50294 290 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Cd300lbQ3U497 209 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Rnf152Q8BG47 203 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm10190Q8BSD7 107 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Msrb3Q8BU85 253 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr1440Q8VFV4 315 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Dpm3Q9D1Q4 92 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 PifoQ9D9W1 207 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Krtap10-10A0A1W2P7T6 217 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm3072F6SKY8 209 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm17654F7AXR3 209 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 MgpP19788 104 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Ube2g2P60605 165 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Trav15-1-dv6-1Q5R1D2 117 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Q8C708 225 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 AmtQ8CFA2 403 aaKnown RBP6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Rpl11Q9CXW4 178 aaKnown RBP6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Efcab10Q9D581 132 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Spaca3Q9D9X8 221 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 PerpQ9JK95 193 aa6.7□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Notch3Q61982 2318 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm28845A0A087WR76 214 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr1245A0A1L1SQJ6 307 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Zfp983E9PUT0 460 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Pde6hP61249 83 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 ElobP62869 118 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Wfdc15aQ8BH89 80 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Tmem91Q8C581 172 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 RetnlgQ8K426 117 aa6.69□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms