RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 V1rd19Q3KNP5 305 aa11.9□□□□□ -0.5
Nup54-201ENSMUST00000038514 Gng7Q61016 68 aa11.9□□□□□ -0.5
Nup54-201ENSMUST00000038514 Vmn1r216Q8R257 298 aa11.9□□□□□ -0.5
Nup54-201ENSMUST00000038514 Cdpf1Q8R3A2 119 aa11.9□□□□□ -0.5
Nup54-201ENSMUST00000038514 Vps25Q9CQ80 176 aa11.9□□□□□ -0.5
Nup54-201ENSMUST00000038514 Chchd5Q9CQP3 110 aa11.9□□□□□ -0.5
Nup54-201ENSMUST00000038514 Spta1P08032 2415 aa11.9□□□□□ -0.5
Nup54-201ENSMUST00000038514 Gm6096D3YTY6 151 aa11.9□□□□□ -0.51
Nup54-201ENSMUST00000038514 Brs3O54798 399 aa11.9□□□□□ -0.51
Nup54-201ENSMUST00000038514 P01783 136 aa11.9□□□□□ -0.51
Nup54-201ENSMUST00000038514 P04944 107 aa11.9□□□□□ -0.51
Nup54-201ENSMUST00000038514 Olfr1336Q8VGH5 314 aa11.9□□□□□ -0.51
Nup54-201ENSMUST00000038514 Trbv26A0A0B4J1P5 115 aa11.89□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm3072F6SKY8 209 aa11.89□□□□□ -0.51
Nup54-201ENSMUST00000038514 Nxph4G3X9N5 304 aa11.89□□□□□ -0.51
Nup54-201ENSMUST00000038514 Rbx1P62878 108 aa11.89□□□□□ -0.51
Nup54-201ENSMUST00000038514 SeleQ00690 612 aa11.89□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm15292L7N231 93 aa11.89□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm26965M0QWH4 86 aa11.89□□□□□ -0.51
Nup54-201ENSMUST00000038514 Q24JP4 165 aa11.89□□□□□ -0.51
Nup54-201ENSMUST00000038514 9130213A22RikQ3V3T2 120 aa11.89□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm10188Q3V432 135 aa11.89□□□□□ -0.51
Nup54-201ENSMUST00000038514 Mex3bQ69Z36 601 aaKnown RBP11.89□□□□□ -0.51
Nup54-201ENSMUST00000038514 Rhox7bA6PW38 321 aa11.88□□□□□ -0.51
Nup54-201ENSMUST00000038514 Ovol3D3YYM0 189 aa11.88□□□□□ -0.51
Nup54-201ENSMUST00000038514 Mc5rP41149 325 aa11.88□□□□□ -0.51
Nup54-201ENSMUST00000038514 CampP51437 172 aa11.88□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm17660B9UIU9 90 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Rtl10D3YWW5 146 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 E030018B13RikJ3QMS9 113 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm6871L7N248 545 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Ccl11P48298 97 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Olfr16Q62007 309 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Cd33Q63994 403 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Olfr1199Q8VF94 310 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 B1ARW8 110 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Fosl1P48755 273 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Dtx1Q61010 627 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Ppp1r3cQ7TMB3 317 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 A730015C16RikQ8C992 119 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Zfhx4Q9JJN2 3550 aa11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Map1bP14873 2464 aaKnown RBP11.87□□□□□ -0.51
Nup54-201ENSMUST00000038514 Trav6d-7A0A075B6B0 112 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 Bsph1Q3UW26 133 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 Arl6ip6Q8BH07 226 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm26566Q8CAC1 153 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 Olfr975Q8VG91 310 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm15056F6ZR08 88 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 Tmem241Q3UME2 297 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 Pmis2Q497Q9 96 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 Ammecr1lQ8JZZ6 310 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 Tmem189Q99LQ7 271 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 Lyzl1Q9CPX3 148 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 EsdQ9R0P3 282 aa11.86□□□□□ -0.51
Nup54-201ENSMUST00000038514 Ighv8-4A0A0A6YW26 117 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm765B2RVL9 189 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Fgfbp1O70514 251 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Map6d1Q14BB9 191 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Olfr149Q60888 311 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Olfr150Q60895 312 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Olfr761Q7TRJ0 323 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Hnrnpa3Q8BG05 379 aaKnown RBP11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Tomm40Q9QYA2 361 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Ighv1-16A0A075B5U1 98 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Plcxd2B2RXA1 340 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Vmn1r60G3UY47 300 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Saa3P04918 122 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 RhogP84096 191 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gfra1P97785 468 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Fam216bQ8CC14 138 aa11.85□□□□□ -0.51
Nup54-201ENSMUST00000038514 Trav6n-6A0A075B6B2 114 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm3512L7N206 146 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 P01793 123 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 CebpdQ00322 268 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Clec4b2Q67DU8 208 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Olfr433Q7TRV9 314 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Slc17a9Q8VCL5 447 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Errfi1Q99JZ7 461 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Abca7Q91V24 2159 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm45213A0A0U1RNZ6 101 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Gm10277Q6R5C6 214 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Olfr823Q7TRH2 315 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Olfr824Q8VFU4 315 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Olfr1256Q8VGP1 306 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Fbxl15Q91W61 300 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 IcosQ9WVS0 200 aa11.84□□□□□ -0.51
Nup54-201ENSMUST00000038514 Ncoa6Q9JL19 2067 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 Olfr1192-ps1A0A1L1SRD7 309 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 P18532 116 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 Gm10192Q3V0S1 108 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 C1qtnf4Q8R066 326 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 Malsu1Q9CWV0 228 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 Plekhb2Q9QZC7 221 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 AcacaQ5SWU9 2345 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 Akap9Q70FJ1 3797 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 PoleQ9WVF7 2283 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 Trbv31A0A075B5J5 111 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 Trav7n-5A0A075B604 112 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 Cd3eP22646 189 aa11.83□□□□□ -0.52
Nup54-201ENSMUST00000038514 Timm8bP62077 83 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 66.9 ms