RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Tmem129Q8K304 362 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 GlrxQ9QUH0 107 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Col24a1Q30D77 1733 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Trav21-dv12A0A075B6C4 109 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 H2al1jA2BFR3 109 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Gm17732E9Q5I2 61 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 P01630 113 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Plp1P60202 277 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Srsf1Q6PDM2 248 aaKnown RBP8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Esp4A8R0T8 117 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Inafm1E9PV59 130 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Saa4P31532 130 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Pde6hP61249 83 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Tmem136Q3TYE7 245 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Gm12888Q3UW77 119 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 AdipoqQ60994 247 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 SnrpcQ62241 159 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Olfr1380Q7TQT5 311 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Polr3kQ9CQZ7 108 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Slc25a39Q9D8K8 359 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Ly6c1P0CW02 131 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Nutf2P61971 127 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Rp1l1Q8CGM2 1859 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Olfr1402Q8VET1 320 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 GgctQ9D7X8 188 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 P0C1Z5 52 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Defa24Q5G865 93 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Igfbpl1Q80W15 270 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Ormdl2Q9CQZ0 153 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Fancd2osQ9D4K4 178 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Spaca3Q9D9X8 221 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Snrnp200Q6P4T2 2136 aaKnown RBP8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 MyofQ69ZN7 2048 aaKnown RBP8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Erg28Q9ERY9 140 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Ighv1-26A0A075B5V0 117 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Pfn1P62962 140 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Spata46Q4FZF2 204 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Usmg5Q78IK2 58 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Q8BG31 207 aa8.36□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Pex7P97865 318 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Loxl1P97873 607 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Olfr1373Q7TQT6 311 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Crim1Q9JLL0 1037 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Umad1E0CX23 159 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Defa3P28310 93 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Defa10P50708 93 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Defa15P50713 93 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Gm94Q3V2D2 93 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Stpg1Q9D2F5 341 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 3110021N24RikJ3QMN2 152 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Zfp983E9PUT0 460 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 IappP12968 93 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Defb30Q30KN4 75 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Gm10447Q3UQ92 135 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Foxc2Q61850 494 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Pth2Q91W27 100 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Crybb3Q9JJU9 211 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Pkd1l3Q2EG98 2201 aa8.35□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Igkv14-130A0A0G2JF45 117 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Q3UNZ8 350 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Ifitm10Q8BR26 201 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Atxn7l1Q9CZ05 146 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Ncor1Q60974 2453 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Scgb1b24B1B0N6 92 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 AmelxP63277 210 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Ovol1Q9WTJ2 267 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Trbv31A0A075B5J5 111 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Gm28778A0A087WSK7 233 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Ighv1-19A0A0A6YWX0 117 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Gm4744D3Z3S5 154 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Ypel3P61237 119 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Dnal4Q9DCM4 105 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Cend1Q9JKC6 149 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Fam19a2Q7TPG7 131 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Prr23a3Q9CWP9 254 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 PifoQ9D9W1 207 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Timm10bQ9WV96 100 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Lrrk1Q3UHC2 2014 aa8.34□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Col5a3Q9JLI2 1739 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 PigyP0C1P0 71 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Ighv3-6P18531 116 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Repin1Q5U4E2 545 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Immp1lQ9CQU8 166 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Igkv19-93A0A0G2JFZ3 115 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Tpsab1Q02844 273 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Trav16d-dv11A0A075B617 117 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Trav14n-3A0A075B645 120 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gm13030A2APQ6 143 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 LoxP28301 411 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Tmem256Q5F285 113 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Olfr975Q8VG91 310 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Cacna1gQ5SUF7 2381 aa8.33□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Thap8E9Q695 213 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Q8C708 225 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Mrpl36Q99N90 102 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 PtprsB0V2N1 1907 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gm5150Q1AN92 299 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 H2-DMb2Q31099 261 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Wfdc21Q8BTE6 63 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Plpp2Q9DAX2 276 aa8.32□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 159.8 ms