RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 LINC00322Q6ZN03 302 aaPredicted RBP0.87□□□□□ -2.27
CCDC7-216ENST00000640058 HEATR1Q9H583 2144 aaKnown RBP0.87□□□□□ -2.27
CCDC7-216ENST00000640058 UBE2D4Q9Y2X8 147 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 LINC01558Q9Y6Z2 57 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 MYOM1P52179 1685 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 DOCK11Q5JSL3 2073 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 UGGT1Q9NYU2 1555 aa0.87□□□□□ -2.27
CCDC7-216ENST00000640058 ATP7BP35670 1465 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 SIPA1L3O60292 1781 aaPredicted RBP0.86□□□□□ -2.27
CCDC7-216ENST00000640058 CPS1P31327 1500 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 A0A087WVE0 104 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 H0Y9P7 68 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 IGLV3-1P01715 115 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 FCER1GP30273 86 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 SERF2P84101 59 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 DEFB107AQ8IZN7 70 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 WFDC9Q8NEX5 89 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 FDCSPQ8NFU4 85 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 UBL5Q9BZL1 73 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 LINC00846Q9NV44 126 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 SIP14410 1827 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 ANKRD50Q9ULJ7 1429 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 ZGRF1Q86YA3 2104 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 CRYBG1Q9Y4K1 1723 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 PAPPAQ13219 1627 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 USP32Q8NFA0 1604 aa0.86□□□□□ -2.27
CCDC7-216ENST00000640058 LRRC7Q96NW7 1537 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 MROH2AA6NES4 1674 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 COL4A6Q14031 1691 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 NHSQ6T4R5 1651 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 RREB1Q92766 1687 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 ALS2Q96Q42 1657 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 TRAV1-2A0A0B4J238 106 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 TRBV7-4A0A0J9YYF1 115 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 CLPSL1A2RUU4 121 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 LINC01549A6NIU2 74 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 M0R2N4 97 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 ACYP2P14621 99 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 S100A3P33764 101 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 CAV3P56539 151 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 FXYD4P59646 89 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 DIP2AQ14689 1571 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 FXYD3Q14802 87 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 GDF5OSQ5U4N7 250 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 CDC42BPGQ6DT37 1551 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 Q6ZQY7 126 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 TMEM263Q8WUH6 116 aaKnown RBP0.85□□□□□ -2.27
CCDC7-216ENST00000640058 LINC00208Q96KT6 92 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 WFDC6Q9BQY6 131 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 NMES1Q9C002 83 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 PROK2Q9HC23 129 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 IFT172Q9UG01 1749 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 MAST1Q9Y2H9 1570 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 DLEC1Q9Y238 1755 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 PI4KAP42356 2102 aa0.85□□□□□ -2.27
CCDC7-216ENST00000640058 MED12Q93074 2177 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 PKD1L3Q7Z443 1732 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 GLI2P10070 1586 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 ARHGEF5Q12774 1597 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 FBN2P35556 2912 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.84□□□□□ -2.27
CCDC7-216ENST00000640058 TRBV30A0A0K0K1B3 111 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 INE1O15225 51 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 RPL38P63173 70 aaKnown RBP0.84□□□□□ -2.27
CCDC7-216ENST00000640058 NREPQ16612 68 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 DEFB112Q30KQ8 113 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 C10orf113Q5VZT2 155 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 DEFB132Q7Z7B7 95 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 C5orf56Q8N8D9 126 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 GAFA1Q96PS6 74 aa0.84□□□□□ -2.27
CCDC7-216ENST00000640058 C5P01031 1676 aa0.84□□□□□ -2.28
CCDC7-216ENST00000640058 SCN7AQ01118 1682 aa0.84□□□□□ -2.28
CCDC7-216ENST00000640058 SHPRHQ149N8 1683 aa0.84□□□□□ -2.28
CCDC7-216ENST00000640058 ITSN2Q9NZM3 1697 aa0.84□□□□□ -2.28
CCDC7-216ENST00000640058 UNC13CQ8NB66 2214 aa0.84□□□□□ -2.28
CCDC7-216ENST00000640058 NUP188Q5SRE5 1749 aa0.84□□□□□ -2.28
CCDC7-216ENST00000640058 TENM3Q9P273 2699 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 IQGAP2Q13576 1575 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 LOC285556D6RIA3 1793 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 KIAA0556O60303 1618 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 CICQ96RK0 1608 aaPredicted RBP0.83□□□□□ -2.28
CCDC7-216ENST00000640058 ALKQ9UM73 1620 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 ARFGEF1Q9Y6D6 1849 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 TRGV1A0A0A0MS02 117 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 TRAV21A0A0B4J279 112 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 TRBV6-1A0A0K0K1D8 114 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 NBDYA0A0U1RRE5 68 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 NCR3O14931 201 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 IFI6P09912 130 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 ZNF137PP52743 207 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 CMC2Q9NRP2 79 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 KIF1AQ12756 1690 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 CTTNBP2Q8WZ74 1663 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 ANKRD36A6QL64 1941 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 TIAM2Q8IVF5 1701 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 FMN2Q9NZ56 1722 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 KIAA0586Q9BVV6 1533 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 ANKRD36CQ5JPF3 1778 aa0.83□□□□□ -2.28
CCDC7-216ENST00000640058 ZNF469Q96JG9 3925 aaPredicted RBP0.83□□□□□ -2.28
CCDC7-216ENST00000640058 NESP48681 1621 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms