RNA–Protein interactions for RNA: ENST00000639409.1

PAX6-257, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-257ENST00000639409 F8P00451 2351 aa7.76□□□□□ -1.17
PAX6-257ENST00000639409 FLNBO75369 2602 aaKnown RBP7.76□□□□□ -1.17
PAX6-257ENST00000639409 SRSF9Q13242 221 aaKnown RBP eCLIP7.76□□□□□ -1.17
PAX6-257ENST00000639409 IGHV3-30-3P0DP02 117 aa7.75□□□□□ -1.17
PAX6-257ENST00000639409 LYRM9A8MSI8 78 aa7.75□□□□□ -1.17
PAX6-257ENST00000639409 C8orf87E5RJ46 101 aa7.75□□□□□ -1.17
PAX6-257ENST00000639409 CMYA5Q8N3K9 4069 aa7.74□□□□□ -1.17
PAX6-257ENST00000639409 CXCL5P42830 114 aa7.74□□□□□ -1.17
PAX6-257ENST00000639409 UBE2D1P51668 147 aa7.74□□□□□ -1.17
PAX6-257ENST00000639409 LINC01600Q96MT4 127 aa7.74□□□□□ -1.17
PAX6-257ENST00000639409 TIMM21Q9BVV7 248 aa7.74□□□□□ -1.17
PAX6-257ENST00000639409 IGHV3-30P01768 117 aa7.74□□□□□ -1.17
PAX6-257ENST00000639409 IGHV3-30-5P0DP03 117 aa7.74□□□□□ -1.17
PAX6-257ENST00000639409 FHL2Q14192 279 aa7.73□□□□□ -1.17
PAX6-257ENST00000639409 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
PAX6-257ENST00000639409 CDKN2A-AS1Q9UH64 79 aa7.73□□□□□ -1.17
PAX6-257ENST00000639409 X6R8D5 127 aa7.73□□□□□ -1.17
PAX6-257ENST00000639409 TRGV4A0A0C4DH28 118 aa7.73□□□□□ -1.17
PAX6-257ENST00000639409 DEFB130BP0DP73 79 aa7.73□□□□□ -1.17
PAX6-257ENST00000639409 DEFB130AP0DP74 79 aa7.73□□□□□ -1.17
PAX6-257ENST00000639409 COX6A2Q02221 97 aa7.73□□□□□ -1.17
PAX6-257ENST00000639409 UPK3BQ9BT76 320 aa7.73□□□□□ -1.17
PAX6-257ENST00000639409 IGHV1-58A0A0C4DH39 117 aa7.72□□□□□ -1.17
PAX6-257ENST00000639409 TRBV6-4A0A1B0GX49 114 aa7.72□□□□□ -1.17
PAX6-257ENST00000639409 TM2D3Q9BRN9 247 aa7.72□□□□□ -1.17
PAX6-257ENST00000639409 FP248Q71RG6 208 aaPredicted RBP7.72□□□□□ -1.17
PAX6-257ENST00000639409 A0A0J9YXY3 114 aa7.71□□□□□ -1.17
PAX6-257ENST00000639409 VSIG2Q96IQ7 327 aa7.71□□□□□ -1.17
PAX6-257ENST00000639409 DEFB135Q30KP9 77 aa7.71□□□□□ -1.18
PAX6-257ENST00000639409 LINC00242Q5T6M2 205 aa7.71□□□□□ -1.18
PAX6-257ENST00000639409 FBN1P35555 2871 aaKnown RBP7.71□□□□□ -1.18
PAX6-257ENST00000639409 PSMB2P49721 201 aa7.7□□□□□ -1.18
PAX6-257ENST00000639409 HIST1H4AP62805 103 aaKnown RBP7.7□□□□□ -1.18
PAX6-257ENST00000639409 IGLV5-45A0A087WSX0 123 aa7.7□□□□□ -1.18
PAX6-257ENST00000639409 DEFB4AO15263 64 aa7.7□□□□□ -1.18
PAX6-257ENST00000639409 EIF4EBP3O60516 100 aaPredicted RBP7.7□□□□□ -1.18
PAX6-257ENST00000639409 SFTA2Q6UW10 78 aa7.7□□□□□ -1.18
PAX6-257ENST00000639409 SERP2Q8N6R1 65 aa7.7□□□□□ -1.18
PAX6-257ENST00000639409 LITAFQ99732 161 aa7.7□□□□□ -1.18
PAX6-257ENST00000639409 CDC42SE2Q9NRR3 84 aa7.7□□□□□ -1.18
PAX6-257ENST00000639409 CFC1BP0CG36 223 aa7.69□□□□□ -1.18
PAX6-257ENST00000639409 CFC1P0CG37 223 aa7.69□□□□□ -1.18
PAX6-257ENST00000639409 KTN1-AS1Q86SY8 53 aa7.69□□□□□ -1.18
PAX6-257ENST00000639409 LINC00612Q8N6U2 182 aa7.69□□□□□ -1.18
PAX6-257ENST00000639409 CYSTM1Q9H1C7 97 aa7.69□□□□□ -1.18
PAX6-257ENST00000639409 TMEM243Q9BU79 118 aa7.69□□□□□ -1.18
PAX6-257ENST00000639409 NDUFA12Q9UI09 145 aa7.69□□□□□ -1.18
PAX6-257ENST00000639409 A0A0A0MQY5 61 aa7.68□□□□□ -1.18
PAX6-257ENST00000639409 ADAMTSL4-AS1Q5T5F5 129 aa7.68□□□□□ -1.18
PAX6-257ENST00000639409 C11orf68Q9H3H3 251 aaKnown RBP7.68□□□□□ -1.18
PAX6-257ENST00000639409 UBE2L6O14933 153 aa7.68□□□□□ -1.18
PAX6-257ENST00000639409 MUSTN1Q8IVN3 82 aa7.68□□□□□ -1.18
PAX6-257ENST00000639409 PKD1L1Q8TDX9 2849 aa7.67□□□□□ -1.18
PAX6-257ENST00000639409 ACYP1P07311 99 aa7.67□□□□□ -1.18
PAX6-257ENST00000639409 FAM222AQ5U5X8 452 aa7.67□□□□□ -1.18
PAX6-257ENST00000639409 C5orf38Q86SI9 138 aa7.67□□□□□ -1.18
PAX6-257ENST00000639409 IGLV4-60A0A075B6I1 120 aa7.66□□□□□ -1.18
PAX6-257ENST00000639409 TRBV6-8A0A0A6YYG3 113 aa7.66□□□□□ -1.18
PAX6-257ENST00000639409 SMIM1B2RUZ4 78 aa7.66□□□□□ -1.18
PAX6-257ENST00000639409 SLC25A20O43772 301 aa7.66□□□□□ -1.18
PAX6-257ENST00000639409 FAM19A3Q7Z5A8 133 aa7.66□□□□□ -1.18
PAX6-257ENST00000639409 A0A096LPF7 62 aa7.65□□□□□ -1.18
PAX6-257ENST00000639409 IGKV3OR2-268A0A0C4DH90 116 aa7.65□□□□□ -1.18
PAX6-257ENST00000639409 IGLV5-39A0A0G2JS06 123 aa7.65□□□□□ -1.18
PAX6-257ENST00000639409 GYPEP15421 78 aa7.65□□□□□ -1.18
PAX6-257ENST00000639409 DAD1P61803 113 aa7.65□□□□□ -1.18
PAX6-257ENST00000639409 DAND5Q8N907 189 aa7.65□□□□□ -1.18
PAX6-257ENST00000639409 STAB1Q9NY15 2570 aa7.65□□□□□ -1.19
PAX6-257ENST00000639409 LINC00643Q86TS7 51 aa7.64□□□□□ -1.19
PAX6-257ENST00000639409 WFDC9Q8NEX5 89 aa7.64□□□□□ -1.19
PAX6-257ENST00000639409 IGHV4-28A0A0C4DH34 117 aa7.64□□□□□ -1.19
PAX6-257ENST00000639409 CELA1Q9UNI1 258 aa7.64□□□□□ -1.19
PAX6-257ENST00000639409 LOC107984156A0A0G2JMH3 177 aa7.63□□□□□ -1.19
PAX6-257ENST00000639409 ARL17AQ8IVW1 177 aa7.63□□□□□ -1.19
PAX6-257ENST00000639409 ZNF625Q96I27 306 aaPredicted RBP7.63□□□□□ -1.19
PAX6-257ENST00000639409 NDUFA1O15239 70 aa7.63□□□□□ -1.19
PAX6-257ENST00000639409 IGHV4-30-4P0DP06 118 aa7.63□□□□□ -1.19
PAX6-257ENST00000639409 PRO1854Q9UHT4 67 aa7.63□□□□□ -1.19
PAX6-257ENST00000639409 PRSS2P07478 247 aa7.62□□□□□ -1.19
PAX6-257ENST00000639409 Q8NAQ8 132 aa7.62□□□□□ -1.19
PAX6-257ENST00000639409 H7C423 109 aa7.62□□□□□ -1.19
PAX6-257ENST00000639409 SS18Q15532 418 aa7.62□□□□□ -1.19
PAX6-257ENST00000639409 MIAQ16674 131 aa7.62□□□□□ -1.19
PAX6-257ENST00000639409 DNAH3Q8TD57 4116 aa7.61□□□□□ -1.19
PAX6-257ENST00000639409 H7C2G1 150 aa7.61□□□□□ -1.19
PAX6-257ENST00000639409 NDUFS5O43920 106 aa7.61□□□□□ -1.19
PAX6-257ENST00000639409 KRTAP24-1Q3LI83 254 aa7.61□□□□□ -1.19
PAX6-257ENST00000639409 NTN5Q8WTR8 489 aaPredicted RBP7.61□□□□□ -1.19
PAX6-257ENST00000639409 PRO0255Q9UI72 69 aa7.61□□□□□ -1.19
PAX6-257ENST00000639409 A0A0B4J2C4 111 aa7.61□□□□□ -1.19
PAX6-257ENST00000639409 DEFB121Q5J5C9 76 aa7.61□□□□□ -1.19
PAX6-257ENST00000639409 C6orf223Q8N319 242 aa7.61□□□□□ -1.19
PAX6-257ENST00000639409 UBE2WQ96B02 151 aa7.61□□□□□ -1.19
PAX6-257ENST00000639409 TIMM17BO60830 172 aa7.6□□□□□ -1.19
PAX6-257ENST00000639409 IGHV3-33P01772 117 aa7.6□□□□□ -1.19
PAX6-257ENST00000639409 MAST4O15021 2626 aa7.6□□□□□ -1.19
PAX6-257ENST00000639409 CLPSL2Q6UWE3 100 aa7.59□□□□□ -1.19
PAX6-257ENST00000639409 Q8N3U1 123 aa7.59□□□□□ -1.19
PAX6-257ENST00000639409 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.58□□□□□ -1.2
PAX6-257ENST00000639409 KRTAP10-11P60412 298 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms