RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TRBV7-7A0A0K0K1E9 115 aa13.14□□□□□ -0.31
SCARB2-213ENST00000638680 OXLD1Q5BKU9 147 aa13.14□□□□□ -0.31
SCARB2-213ENST00000638680 OTOGLQ3ZCN5 2332 aa13.13□□□□□ -0.31
SCARB2-213ENST00000638680 CUL9Q8IWT3 2517 aa13.13□□□□□ -0.31
SCARB2-213ENST00000638680 A8MTW9 85 aa13.13□□□□□ -0.31
SCARB2-213ENST00000638680 PSPHP1O15172 72 aa13.13□□□□□ -0.31
SCARB2-213ENST00000638680 RETNQ9HD89 108 aa13.13□□□□□ -0.31
SCARB2-213ENST00000638680 PTPN13Q12923 2485 aa13.13□□□□□ -0.31
SCARB2-213ENST00000638680 BRI3O95415 125 aa13.13□□□□□ -0.31
SCARB2-213ENST00000638680 LINC00337Q8N6G1 96 aa13.13□□□□□ -0.31
SCARB2-213ENST00000638680 LINC01546A6NGU7 62 aa13.12□□□□□ -0.31
SCARB2-213ENST00000638680 C2CD3Q4AC94 2353 aa13.11□□□□□ -0.31
SCARB2-213ENST00000638680 KIF25-AS1Q9Y6Z4 181 aa13.1□□□□□ -0.31
SCARB2-213ENST00000638680 TMEM254Q8TBM7 123 aa13.1□□□□□ -0.31
SCARB2-213ENST00000638680 RAI1Q7Z5J4 1906 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-213ENST00000638680 IGHV6-1A0A0B4J1U7 121 aa13.09□□□□□ -0.31
SCARB2-213ENST00000638680 NOTCH2Q04721 2471 aa13.09□□□□□ -0.31
SCARB2-213ENST00000638680 PCOTHQ58A44 107 aa13.08□□□□□ -0.31
SCARB2-213ENST00000638680 TRBV7-6A0A0J9YX20 115 aa13.08□□□□□ -0.32
SCARB2-213ENST00000638680 DEFB116Q30KQ4 102 aa13.08□□□□□ -0.32
SCARB2-213ENST00000638680 A0A1B0GUV1 79 aa13.08□□□□□ -0.32
SCARB2-213ENST00000638680 A0A1W2PPR1 153 aa13.08□□□□□ -0.32
SCARB2-213ENST00000638680 SMCPP49901 116 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-213ENST00000638680 Q9BRP9 147 aa13.07□□□□□ -0.32
SCARB2-213ENST00000638680 PLA2G2AP14555 144 aa13.06□□□□□ -0.32
SCARB2-213ENST00000638680 A0A087WSZ3 146 aa13.05□□□□□ -0.32
SCARB2-213ENST00000638680 SMR3AQ99954 134 aa13.05□□□□□ -0.32
SCARB2-213ENST00000638680 SONP18583 2426 aaKnown RBP13.05□□□□□ -0.32
SCARB2-213ENST00000638680 KRTAP10-9P60411 292 aa13.05□□□□□ -0.32
SCARB2-213ENST00000638680 ATRXP46100 2492 aa13.05□□□□□ -0.32
SCARB2-213ENST00000638680 H0Y9P7 68 aa13.05□□□□□ -0.32
SCARB2-213ENST00000638680 Q6ZTC4 211 aa13.05□□□□□ -0.32
SCARB2-213ENST00000638680 CIRBP-AS1Q8TBR5 109 aa13.03□□□□□ -0.32
SCARB2-213ENST00000638680 COL5A1P20908 1838 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-213ENST00000638680 HIVEP3Q5T1R4 2406 aa13.03□□□□□ -0.32
SCARB2-213ENST00000638680 IGLV5-39A0A0G2JS06 123 aa13.02□□□□□ -0.33
SCARB2-213ENST00000638680 LINC01561Q8N1V8 128 aa13.02□□□□□ -0.33
SCARB2-213ENST00000638680 RETNLBQ9BQ08 111 aa13.02□□□□□ -0.33
SCARB2-213ENST00000638680 LY6G6CO95867 125 aa13.02□□□□□ -0.33
SCARB2-213ENST00000638680 HCG22E2RYF7 251 aa13.01□□□□□ -0.33
SCARB2-213ENST00000638680 CXCL6P80162 114 aa13□□□□□ -0.33
SCARB2-213ENST00000638680 Q8N2B8 174 aa13□□□□□ -0.33
SCARB2-213ENST00000638680 C2orf48Q96LS8 159 aa13□□□□□ -0.33
SCARB2-213ENST00000638680 LYPD5Q6UWN5 251 aa13□□□□□ -0.33
SCARB2-213ENST00000638680 PRO0461Q9UI25 63 aa12.99□□□□□ -0.33
SCARB2-213ENST00000638680 Q6ZRU5 148 aa12.99□□□□□ -0.33
SCARB2-213ENST00000638680 EXPH5Q8NEV8 1989 aa12.98□□□□□ -0.33
SCARB2-213ENST00000638680 LINC00315P59091 139 aa12.98□□□□□ -0.33
SCARB2-213ENST00000638680 F8WDY8 70 aa12.97□□□□□ -0.33
SCARB2-213ENST00000638680 C11orf72Q8NBR9 251 aa12.97□□□□□ -0.33
SCARB2-213ENST00000638680 CACNA1AO00555 2505 aa12.97□□□□□ -0.33
SCARB2-213ENST00000638680 C16orf95Q9H693 158 aa12.96□□□□□ -0.34
SCARB2-213ENST00000638680 CRYGAP11844 174 aa12.96□□□□□ -0.34
SCARB2-213ENST00000638680 NAV2Q8IVL1 2488 aa12.95□□□□□ -0.34
SCARB2-213ENST00000638680 SPATA3Q8NHX4 192 aa12.94□□□□□ -0.34
SCARB2-213ENST00000638680 SMIM29Q86T20 159 aa12.93□□□□□ -0.34
SCARB2-213ENST00000638680 FAM19A4Q96LR4 140 aa12.93□□□□□ -0.34
SCARB2-213ENST00000638680 FAM218AQ96MZ4 157 aa12.93□□□□□ -0.34
SCARB2-213ENST00000638680 LINC01556Q5JQF7 62 aa12.93□□□□□ -0.34
SCARB2-213ENST00000638680 PRLHP81277 87 aa12.92□□□□□ -0.34
SCARB2-213ENST00000638680 SBSPONQ8IVN8 264 aa12.92□□□□□ -0.34
SCARB2-213ENST00000638680 hDV103S1A0JD37 113 aa12.91□□□□□ -0.34
SCARB2-213ENST00000638680 Q9UF83 564 aa12.91□□□□□ -0.34
SCARB2-213ENST00000638680 IGHV3OR16-9A0A0B4J2B5 98 aa12.91□□□□□ -0.34
SCARB2-213ENST00000638680 AGRNO00468 2067 aa12.91□□□□□ -0.34
SCARB2-213ENST00000638680 PRRC2AP48634 2157 aaKnown RBP12.9□□□□□ -0.34
SCARB2-213ENST00000638680 KIAA0087Q14695 138 aa12.9□□□□□ -0.34
SCARB2-213ENST00000638680 ADAMTS20P59510 1910 aa12.9□□□□□ -0.34
SCARB2-213ENST00000638680 SPINK1P00995 79 aa12.9□□□□□ -0.34
SCARB2-213ENST00000638680 TET2Q6N021 2002 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-213ENST00000638680 C1orf64Q8NEQ6 169 aa12.89□□□□□ -0.35
SCARB2-213ENST00000638680 PIEZO2Q9H5I5 2752 aa12.88□□□□□ -0.35
SCARB2-213ENST00000638680 PRO0628Q9UI54 55 aa12.87□□□□□ -0.35
SCARB2-213ENST00000638680 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
SCARB2-213ENST00000638680 IGLV5-52A0A0A0MRZ9 124 aa12.87□□□□□ -0.35
SCARB2-213ENST00000638680 NUPR2A6NF83 97 aa12.87□□□□□ -0.35
SCARB2-213ENST00000638680 C4orf26Q17RF5 130 aa12.86□□□□□ -0.35
SCARB2-213ENST00000638680 IGLV5-45A0A087WSX0 123 aa12.86□□□□□ -0.35
SCARB2-213ENST00000638680 SMCR5Q8TEV8 140 aa12.86□□□□□ -0.35
SCARB2-213ENST00000638680 X6R8D5 127 aa12.85□□□□□ -0.35
SCARB2-213ENST00000638680 CCDC168Q8NDH2 2452 aa12.83□□□□□ -0.36
SCARB2-213ENST00000638680 ABCA2Q9BZC7 2435 aa12.81□□□□□ -0.36
SCARB2-213ENST00000638680 LIMD2Q9BT23 127 aa12.8□□□□□ -0.36
SCARB2-213ENST00000638680 C6orf48Q9UBA6 75 aa12.8□□□□□ -0.36
SCARB2-213ENST00000638680 BCE1O60756 84 aa12.79□□□□□ -0.36
SCARB2-213ENST00000638680 Q6ZQT0 140 aa12.78□□□□□ -0.36
SCARB2-213ENST00000638680 MYO18BQ8IUG5 2567 aa12.78□□□□□ -0.36
SCARB2-213ENST00000638680 RPS28P62857 69 aaKnown RBP12.78□□□□□ -0.36
SCARB2-213ENST00000638680 ELOF1P60002 83 aaKnown RBP12.75□□□□□ -0.37
SCARB2-213ENST00000638680 LINC00167Q96N53 147 aa12.75□□□□□ -0.37
SCARB2-213ENST00000638680 EP400Q96L91 3159 aa12.75□□□□□ -0.37
SCARB2-213ENST00000638680 IGF2RP11717 2491 aa12.75□□□□□ -0.37
SCARB2-213ENST00000638680 LOC110117498A0A087WWA1 95 aa12.73□□□□□ -0.37
SCARB2-213ENST00000638680 WDR87Q6ZQQ6 2873 aa12.71□□□□□ -0.37
SCARB2-213ENST00000638680 MYO9AB2RTY4 2548 aa12.71□□□□□ -0.38
SCARB2-213ENST00000638680 TM2D3Q9BRN9 247 aa12.7□□□□□ -0.38
SCARB2-213ENST00000638680 IGKV2D-30A0A075B6S6 120 aa12.7□□□□□ -0.38
SCARB2-213ENST00000638680 IGKV2-30P06310 120 aa12.7□□□□□ -0.38
SCARB2-213ENST00000638680 LITAFQ99732 161 aa12.69□□□□□ -0.38
SCARB2-213ENST00000638680 FHL3Q13643 280 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms