RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 ALKBH7Q9BT30 221 aaPredicted RBP7.37□□□□□ -1.23
UBR1-212ENST00000627960 SEC11CQ9BY50 192 aa7.37□□□□□ -1.23
UBR1-212ENST00000627960 GNB1LQ9BYB4 327 aa7.37□□□□□ -1.23
UBR1-212ENST00000627960 CDKN2A-AS1Q9UH64 79 aa7.37□□□□□ -1.23
UBR1-212ENST00000627960 M0QXV9 152 aa7.36□□□□□ -1.23
UBR1-212ENST00000627960 SCGB3A1Q96QR1 104 aa7.36□□□□□ -1.23
UBR1-212ENST00000627960 GEMIN7Q9H840 131 aaKnown RBP7.36□□□□□ -1.23
UBR1-212ENST00000627960 LINC01546A6NGU7 62 aa7.35□□□□□ -1.23
UBR1-212ENST00000627960 S100PP25815 95 aa7.35□□□□□ -1.23
UBR1-212ENST00000627960 UBE2BP63146 152 aa7.35□□□□□ -1.23
UBR1-212ENST00000627960 H0Y9J4 135 aa7.34□□□□□ -1.23
UBR1-212ENST00000627960 COX19Q49B96 90 aa7.34□□□□□ -1.23
UBR1-212ENST00000627960 LINC01549A6NIU2 74 aa7.33□□□□□ -1.24
UBR1-212ENST00000627960 F8VRH5 84 aa7.33□□□□□ -1.24
UBR1-212ENST00000627960 LINC00469Q8N7U9 141 aa7.33□□□□□ -1.24
UBR1-212ENST00000627960 TINCRA0A1B0GVN0 87 aa7.32□□□□□ -1.24
UBR1-212ENST00000627960 CXCL5P42830 114 aa7.32□□□□□ -1.24
UBR1-212ENST00000627960 C10orf91Q5T1B1 145 aa7.32□□□□□ -1.24
UBR1-212ENST00000627960 COMMD7Q86VX2 200 aa7.32□□□□□ -1.24
UBR1-212ENST00000627960 PRR26Q8N8Z3 221 aa7.32□□□□□ -1.24
UBR1-212ENST00000627960 MRPL18Q9H0U6 180 aaKnown RBP7.32□□□□□ -1.24
UBR1-212ENST00000627960 IGLV5-45A0A087WSX0 123 aa7.31□□□□□ -1.24
UBR1-212ENST00000627960 SMIM1B2RUZ4 78 aa7.31□□□□□ -1.24
UBR1-212ENST00000627960 FABP9Q0Z7S8 132 aa7.31□□□□□ -1.24
UBR1-212ENST00000627960 PDZD11Q5EBL8 140 aa7.31□□□□□ -1.24
UBR1-212ENST00000627960 CST9LQ9H4G1 147 aa7.31□□□□□ -1.24
UBR1-212ENST00000627960 XAGE1AQ9HD64 81 aa7.31□□□□□ -1.24
UBR1-212ENST00000627960 C22orf24Q9Y442 160 aa7.31□□□□□ -1.24
UBR1-212ENST00000627960 LBHQ53QV2 105 aaPredicted RBP7.3□□□□□ -1.24
UBR1-212ENST00000627960 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
UBR1-212ENST00000627960 COX7B2Q8TF08 81 aa7.3□□□□□ -1.24
UBR1-212ENST00000627960 IGLV1-50A0A075B6I6 118 aa7.29□□□□□ -1.24
UBR1-212ENST00000627960 KRTAP1-4P0C5Y4 121 aa7.29□□□□□ -1.24
UBR1-212ENST00000627960 PMVKQ15126 192 aa7.29□□□□□ -1.24
UBR1-212ENST00000627960 RHEBQ15382 184 aa7.29□□□□□ -1.24
UBR1-212ENST00000627960 RPS10P5Q9NQ39 176 aa7.29□□□□□ -1.24
UBR1-212ENST00000627960 SMCO4Q9NRQ5 59 aa7.29□□□□□ -1.24
UBR1-212ENST00000627960 CARHSP1Q9Y2V2 147 aaKnown RBP7.29□□□□□ -1.24
UBR1-212ENST00000627960 RNF213Q63HN8 5207 aa7.29□□□□□ -1.24
UBR1-212ENST00000627960 NUPR1O60356 82 aa7.28□□□□□ -1.24
UBR1-212ENST00000627960 TP73-AS1Q9UF72 201 aa7.28□□□□□ -1.24
UBR1-212ENST00000627960 ZNF861PO60384 105 aa7.27□□□□□ -1.25
UBR1-212ENST00000627960 SPINK8P0C7L1 97 aa7.27□□□□□ -1.25
UBR1-212ENST00000627960 MRPL55Q7Z7F7 128 aaKnown RBP7.27□□□□□ -1.25
UBR1-212ENST00000627960 A0A096LNJ9 63 aa7.25□□□□□ -1.25
UBR1-212ENST00000627960 H3BRM9 83 aa7.25□□□□□ -1.25
UBR1-212ENST00000627960 IGLC3P0DOY3 106 aa7.25□□□□□ -1.25
UBR1-212ENST00000627960 RAB5BP61020 215 aa7.25□□□□□ -1.25
UBR1-212ENST00000627960 URB1-AS1Q96HZ7 61 aa7.25□□□□□ -1.25
UBR1-212ENST00000627960 LINC00167Q96N53 147 aa7.25□□□□□ -1.25
UBR1-212ENST00000627960 TRAPPC1Q9Y5R8 145 aa7.25□□□□□ -1.25
UBR1-212ENST00000627960 LINC00614P0C842 121 aa7.24□□□□□ -1.25
UBR1-212ENST00000627960 NDUFA6P56556 154 aa7.24□□□□□ -1.25
UBR1-212ENST00000627960 C18orf32Q8TCD1 76 aa7.24□□□□□ -1.25
UBR1-212ENST00000627960 IGLV5-37A0A075B6J1 123 aa7.23□□□□□ -1.25
UBR1-212ENST00000627960 RPL13AP40429 203 aaKnown RBP7.23□□□□□ -1.25
UBR1-212ENST00000627960 IGLV5-39A0A0G2JS06 123 aa7.22□□□□□ -1.25
UBR1-212ENST00000627960 RPL37AP8A6NKH3 93 aa7.22□□□□□ -1.25
UBR1-212ENST00000627960 BCE1O60756 84 aa7.22□□□□□ -1.25
UBR1-212ENST00000627960 ATP5LO75964 103 aa7.22□□□□□ -1.25
UBR1-212ENST00000627960 HBDP02042 147 aa7.22□□□□□ -1.25
UBR1-212ENST00000627960 LPAP08519 4548 aa7.22□□□□□ -1.25
UBR1-212ENST00000627960 GAGE10A6NGK3 116 aa7.21□□□□□ -1.26
UBR1-212ENST00000627960 ZNF22P17026 224 aaPredicted RBP7.21□□□□□ -1.26
UBR1-212ENST00000627960 RPL28P46779 137 aaKnown RBP7.21□□□□□ -1.26
UBR1-212ENST00000627960 APOC3P02656 99 aa7.2□□□□□ -1.26
UBR1-212ENST00000627960 PFN2P35080 140 aa7.2□□□□□ -1.26
UBR1-212ENST00000627960 PMCHL1Q16048 86 aa7.2□□□□□ -1.26
UBR1-212ENST00000627960 NKAPP1Q8N9T2 125 aa7.2□□□□□ -1.26
UBR1-212ENST00000627960 BAGE3Q86Y29 109 aa7.19□□□□□ -1.26
UBR1-212ENST00000627960 C11orf86A6NJI1 115 aa7.18□□□□□ -1.26
UBR1-212ENST00000627960 SNAPINO95295 136 aa7.18□□□□□ -1.26
UBR1-212ENST00000627960 SVBPQ8N300 66 aa7.18□□□□□ -1.26
UBR1-212ENST00000627960 ERG28Q9UKR5 140 aa7.18□□□□□ -1.26
UBR1-212ENST00000627960 SCO1O75880 301 aa7.17□□□□□ -1.26
UBR1-212ENST00000627960 COX17Q14061 63 aa7.17□□□□□ -1.26
UBR1-212ENST00000627960 NDUFA5Q16718 116 aa7.17□□□□□ -1.26
UBR1-212ENST00000627960 KRTAP13-1Q8IUC0 172 aa7.17□□□□□ -1.26
UBR1-212ENST00000627960 SND1-IT1Q9HBX3 110 aa7.17□□□□□ -1.26
UBR1-212ENST00000627960 A0A087X002 238 aa7.16□□□□□ -1.26
UBR1-212ENST00000627960 VPREB1P12018 145 aa7.16□□□□□ -1.26
UBR1-212ENST00000627960 TMEM170BQ5T4T1 132 aa7.16□□□□□ -1.26
UBR1-212ENST00000627960 ZNF625Q96I27 306 aaPredicted RBP7.16□□□□□ -1.26
UBR1-212ENST00000627960 YPEL4Q96NS1 127 aa7.16□□□□□ -1.26
UBR1-212ENST00000627960 IGKV2-28A0A075B6P5 120 aa7.15□□□□□ -1.26
UBR1-212ENST00000627960 IGKV2D-28P01615 120 aa7.15□□□□□ -1.26
UBR1-212ENST00000627960 CRYGAP11844 174 aa7.15□□□□□ -1.26
UBR1-212ENST00000627960 UBE2AP49459 152 aa7.15□□□□□ -1.26
UBR1-212ENST00000627960 CHTOPQ9Y3Y2 248 aaKnown RBP7.15□□□□□ -1.26
UBR1-212ENST00000627960 RPL24P83731 157 aaKnown RBP7.14□□□□□ -1.27
UBR1-212ENST00000627960 PRR4Q16378 134 aa7.14□□□□□ -1.27
UBR1-212ENST00000627960 SFTA2Q6UW10 78 aa7.14□□□□□ -1.27
UBR1-212ENST00000627960 CHCHD1Q96BP2 118 aaKnown RBP7.14□□□□□ -1.27
UBR1-212ENST00000627960 TRAV12-1A0A0B4J245 112 aa7.13□□□□□ -1.27
UBR1-212ENST00000627960 TYMSOSQ8TAI1 123 aa7.13□□□□□ -1.27
UBR1-212ENST00000627960 ANAPC11Q9NYG5 84 aa7.13□□□□□ -1.27
UBR1-212ENST00000627960 TMEM223A0PJW6 202 aa7.12□□□□□ -1.27
UBR1-212ENST00000627960 TSPAN13O95857 204 aa7.12□□□□□ -1.27
UBR1-212ENST00000627960 Q8NDZ9 215 aa7.12□□□□□ -1.27
UBR1-212ENST00000627960 IFI27L1Q96BM0 104 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms