RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 K7ERU9 68 aa15.02□□□□□ -0.01
PNKP-220ENST00000627232 RPL13AP40429 203 aaKnown RBP15.02□□□□□ -0.01
PNKP-220ENST00000627232 CXCL5P42830 114 aa15.02□□□□□ -0.01
PNKP-220ENST00000627232 FOXI1Q12951 378 aa15.02□□□□□ -0.01
PNKP-220ENST00000627232 WFDC2Q14508 124 aa15.02□□□□□ -0.01
PNKP-220ENST00000627232 MIR7-3HGQ8N6C7 128 aa15.02□□□□□ -0.01
PNKP-220ENST00000627232 IGLV10-54A0A075B6I4 117 aa15.01□□□□□ -0.01
PNKP-220ENST00000627232 LINC00158P58513 81 aa15.01□□□□□ -0.01
PNKP-220ENST00000627232 KLK12Q9UKR0 248 aa15□□□□□ -0.01
PNKP-220ENST00000627232 TRIAP1O43715 76 aa14.99□□□□□ -0.01
PNKP-220ENST00000627232 MALP21145 153 aa14.99□□□□□ -0.01
PNKP-220ENST00000627232 KIAA0087Q14695 138 aa14.99□□□□□ -0.01
PNKP-220ENST00000627232 DNAH3Q8TD57 4116 aa14.98□□□□□ -0.01
PNKP-220ENST00000627232 COX6CP09669 75 aa14.98□□□□□ -0.01
PNKP-220ENST00000627232 TRAV8-4A0A0B4J246 113 aa14.97□□□□□ -0.01
PNKP-220ENST00000627232 CFAP161Q6P656 301 aa14.97□□□□□ -0.01
PNKP-220ENST00000627232 ENHOQ6UWT2 76 aa14.97□□□□□ -0.01
PNKP-220ENST00000627232 KLK5Q9Y337 293 aaPredicted RBP14.97□□□□□ -0.01
PNKP-220ENST00000627232 MAST4O15021 2626 aa14.97□□□□□ -0.01
PNKP-220ENST00000627232 GAGE12HA6NDE8 117 aa14.97□□□□□ -0.01
PNKP-220ENST00000627232 PRB2P02812 416 aaPredicted RBP14.97□□□□□ -0.01
PNKP-220ENST00000627232 CKS1BP61024 79 aa14.97□□□□□ -0.01
PNKP-220ENST00000627232 ATXN8Q156A1 80 aa14.96□□□□□ -0.02
PNKP-220ENST00000627232 CRPP02741 224 aa14.95□□□□□ -0.02
PNKP-220ENST00000627232 ESRGQ1W209 222 aa14.95□□□□□ -0.02
PNKP-220ENST00000627232 WFDC10BQ8IUB3 73 aa14.95□□□□□ -0.02
PNKP-220ENST00000627232 PFN2P35080 140 aa14.94□□□□□ -0.02
PNKP-220ENST00000627232 SMCPP49901 116 aaPredicted RBP14.94□□□□□ -0.02
PNKP-220ENST00000627232 MTURNQ8N3F0 131 aa14.94□□□□□ -0.02
PNKP-220ENST00000627232 SND1-IT1Q9HBX3 110 aa14.94□□□□□ -0.02
PNKP-220ENST00000627232 TRAV10A0A0B4J240 114 aa14.93□□□□□ -0.02
PNKP-220ENST00000627232 DEFB121Q5J5C9 76 aa14.93□□□□□ -0.02
PNKP-220ENST00000627232 TRAV13-2A0A0B4J235 113 aa14.92□□□□□ -0.02
PNKP-220ENST00000627232 CCL18P55774 89 aa14.92□□□□□ -0.02
PNKP-220ENST00000627232 COX17Q14061 63 aa14.92□□□□□ -0.02
PNKP-220ENST00000627232 C2orf82Q6UX34 121 aa14.92□□□□□ -0.02
PNKP-220ENST00000627232 M0QXV9 152 aa14.91□□□□□ -0.02
PNKP-220ENST00000627232 ETDBQ3ZM63 59 aa14.91□□□□□ -0.02
PNKP-220ENST00000627232 UBE2WQ96B02 151 aa14.91□□□□□ -0.02
PNKP-220ENST00000627232 PKD1L1Q8TDX9 2849 aa14.9□□□□□ -0.02
PNKP-220ENST00000627232 C15orf53Q8NAA6 179 aa14.9□□□□□ -0.02
PNKP-220ENST00000627232 LINC01620Q4KN68 170 aa14.89□□□□□ -0.03
PNKP-220ENST00000627232 SPAG11BQ08648 103 aa14.88□□□□□ -0.03
PNKP-220ENST00000627232 LINC01556Q5JQF7 62 aa14.88□□□□□ -0.03
PNKP-220ENST00000627232 MRAPQ8TCY5 172 aa14.88□□□□□ -0.03
PNKP-220ENST00000627232 COL6A5A8TX70 2615 aa14.88□□□□□ -0.03
PNKP-220ENST00000627232 LINC01600Q96MT4 127 aa14.87□□□□□ -0.03
PNKP-220ENST00000627232 IGKV2-28A0A075B6P5 120 aa14.87□□□□□ -0.03
PNKP-220ENST00000627232 C9JAW5 83 aa14.87□□□□□ -0.03
PNKP-220ENST00000627232 IGKV2D-28P01615 120 aa14.87□□□□□ -0.03
PNKP-220ENST00000627232 MUC7Q8TAX7 377 aa14.87□□□□□ -0.03
PNKP-220ENST00000627232 SLC25A20O43772 301 aa14.86□□□□□ -0.03
PNKP-220ENST00000627232 RNF151Q2KHN1 245 aa14.86□□□□□ -0.03
PNKP-220ENST00000627232 MDFIQ99750 246 aa14.86□□□□□ -0.03
PNKP-220ENST00000627232 J3QR89 54 aa14.85□□□□□ -0.03
PNKP-220ENST00000627232 LST1O00453 97 aa14.85□□□□□ -0.03
PNKP-220ENST00000627232 LINC00337Q8N6G1 96 aa14.85□□□□□ -0.03
PNKP-220ENST00000627232 RPL28P46779 137 aaKnown RBP14.83□□□□□ -0.04
PNKP-220ENST00000627232 KRTAP26-1Q6PEX3 210 aa14.83□□□□□ -0.04
PNKP-220ENST00000627232 TEN1Q86WV5 123 aa14.83□□□□□ -0.04
PNKP-220ENST00000627232 CLEC2BQ92478 149 aa14.82□□□□□ -0.04
PNKP-220ENST00000627232 TRBV10-2A0A0K0K1G8 114 aa14.82□□□□□ -0.04
PNKP-220ENST00000627232 DNAH10OSP0CZ25 163 aa14.81□□□□□ -0.04
PNKP-220ENST00000627232 CBY1Q9Y3M2 126 aa14.81□□□□□ -0.04
PNKP-220ENST00000627232 TENM3Q9P273 2699 aa14.8□□□□□ -0.04
PNKP-220ENST00000627232 GVQW2A0A096LPI5 108 aaPredicted RBP14.8□□□□□ -0.04
PNKP-220ENST00000627232 NDUFC2O95298 119 aa14.8□□□□□ -0.04
PNKP-220ENST00000627232 ANKRD29Q8N6D5 301 aa14.8□□□□□ -0.04
PNKP-220ENST00000627232 NTN5Q8WTR8 489 aaPredicted RBP14.8□□□□□ -0.04
PNKP-220ENST00000627232 VPS25Q9BRG1 176 aa14.8□□□□□ -0.04
PNKP-220ENST00000627232 UNQ6190/PRO20217Q6UXQ8 127 aa14.79□□□□□ -0.04
PNKP-220ENST00000627232 C6orf223Q8N319 242 aa14.79□□□□□ -0.04
PNKP-220ENST00000627232 PPDPFLQ8WWR9 84 aa14.78□□□□□ -0.04
PNKP-220ENST00000627232 H3BT86 120 aa14.77□□□□□ -0.04
PNKP-220ENST00000627232 C10orf25Q5T742 122 aa14.77□□□□□ -0.04
PNKP-220ENST00000627232 C9orf116Q5BN46 136 aaPredicted RBP14.76□□□□□ -0.05
PNKP-220ENST00000627232 C1orf43Q9BWL3 253 aa14.76□□□□□ -0.05
PNKP-220ENST00000627232 ANK2Q01484 3957 aa14.75□□□□□ -0.05
PNKP-220ENST00000627232 TRACP01848 142 aa14.74□□□□□ -0.05
PNKP-220ENST00000627232 SMIM11BQ8TCY0 68 aa14.74□□□□□ -0.05
PNKP-220ENST00000627232 LINC00588Q9Y4M8 146 aa14.74□□□□□ -0.05
PNKP-220ENST00000627232 LINC00526Q96FQ7 95 aa14.73□□□□□ -0.05
PNKP-220ENST00000627232 NOTCH1P46531 2555 aa14.73□□□□□ -0.05
PNKP-220ENST00000627232 F8WDY8 70 aa14.72□□□□□ -0.05
PNKP-220ENST00000627232 ZNF561-AS1K7EIQ3 104 aa14.72□□□□□ -0.05
PNKP-220ENST00000627232 CARD19Q96LW7 228 aa14.72□□□□□ -0.05
PNKP-220ENST00000627232 OR13C6PQ8NH95 151 aa14.71□□□□□ -0.05
PNKP-220ENST00000627232 C2orf48Q96LS8 159 aa14.71□□□□□ -0.05
PNKP-220ENST00000627232 H0YGX0 51 aa14.71□□□□□ -0.06
PNKP-220ENST00000627232 C6orf48Q9UBA6 75 aa14.71□□□□□ -0.06
PNKP-220ENST00000627232 C15orf56Q8N910 161 aa14.7□□□□□ -0.06
PNKP-220ENST00000627232 IGKV2D-24A0A075B6R9 120 aa14.69□□□□□ -0.06
PNKP-220ENST00000627232 B9D2Q9BPU9 175 aa14.69□□□□□ -0.06
PNKP-220ENST00000627232 UPK3BQ9BT76 320 aa14.69□□□□□ -0.06
PNKP-220ENST00000627232 CAMK2N2Q96S95 79 aa14.68□□□□□ -0.06
PNKP-220ENST00000627232 HIGD2BQ4VC39 106 aa14.66□□□□□ -0.06
PNKP-220ENST00000627232 FAM218AQ96MZ4 157 aa14.66□□□□□ -0.06
PNKP-220ENST00000627232 TMEM126AQ9H061 195 aa14.66□□□□□ -0.06
PNKP-220ENST00000627232 HUWE1Q7Z6Z7 4374 aaKnown RBP14.63□□□□□ -0.07
PNKP-220ENST00000627232 PRR3P79522 188 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms