RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 PKHD1L1Q86WI1 4243 aa6.65□□□□□ -1.34
SSBP4-215ENST00000625926 LINC01546A6NGU7 62 aa6.65□□□□□ -1.34
SSBP4-215ENST00000625926 LINC01549A6NIU2 74 aa6.65□□□□□ -1.34
SSBP4-215ENST00000625926 KRTAP10-8P60410 259 aa6.65□□□□□ -1.34
SSBP4-215ENST00000625926 Q8IZM0 81 aa6.65□□□□□ -1.34
SSBP4-215ENST00000625926 CDKN2A-AS1Q9UH64 79 aa6.65□□□□□ -1.34
SSBP4-215ENST00000625926 C10orf91Q5T1B1 145 aa6.64□□□□□ -1.35
SSBP4-215ENST00000625926 RPS10P5Q9NQ39 176 aa6.64□□□□□ -1.35
SSBP4-215ENST00000625926 LRP2P98164 4655 aa6.64□□□□□ -1.35
SSBP4-215ENST00000625926 IGLV7-43P04211 117 aa6.63□□□□□ -1.35
SSBP4-215ENST00000625926 FABP9Q0Z7S8 132 aa6.63□□□□□ -1.35
SSBP4-215ENST00000625926 RHEBQ15382 184 aa6.63□□□□□ -1.35
SSBP4-215ENST00000625926 C9orf129Q5T035 196 aaKnown RBP6.63□□□□□ -1.35
SSBP4-215ENST00000625926 FA2HQ7L5A8 372 aa6.63□□□□□ -1.35
SSBP4-215ENST00000625926 KRTAP7-1Q8IUC3 87 aa6.63□□□□□ -1.35
SSBP4-215ENST00000625926 LINC00469Q8N7U9 141 aa6.63□□□□□ -1.35
SSBP4-215ENST00000625926 MRPL18Q9H0U6 180 aaKnown RBP6.63□□□□□ -1.35
SSBP4-215ENST00000625926 CARHSP1Q9Y2V2 147 aaKnown RBP6.63□□□□□ -1.35
SSBP4-215ENST00000625926 TINCRA0A1B0GVN0 87 aa6.62□□□□□ -1.35
SSBP4-215ENST00000625926 F8VRH5 84 aa6.62□□□□□ -1.35
SSBP4-215ENST00000625926 M0QXV9 152 aa6.62□□□□□ -1.35
SSBP4-215ENST00000625926 UBE2BP63146 152 aa6.62□□□□□ -1.35
SSBP4-215ENST00000625926 KRTAP11-1Q8IUC1 163 aa6.62□□□□□ -1.35
SSBP4-215ENST00000625926 DIRC1Q969H9 104 aa6.62□□□□□ -1.35
SSBP4-215ENST00000625926 CST9LQ9H4G1 147 aa6.62□□□□□ -1.35
SSBP4-215ENST00000625926 SMCO4Q9NRQ5 59 aa6.62□□□□□ -1.35
SSBP4-215ENST00000625926 ATP6V1G1O75348 118 aa6.61□□□□□ -1.35
SSBP4-215ENST00000625926 CXCL5P42830 114 aa6.61□□□□□ -1.35
SSBP4-215ENST00000625926 PDZD11Q5EBL8 140 aa6.61□□□□□ -1.35
SSBP4-215ENST00000625926 IGLV5-45A0A087WSX0 123 aa6.6□□□□□ -1.35
SSBP4-215ENST00000625926 SMIM1B2RUZ4 78 aa6.6□□□□□ -1.35
SSBP4-215ENST00000625926 ODF1Q14990 250 aa6.6□□□□□ -1.35
SSBP4-215ENST00000625926 PMVKQ15126 192 aa6.6□□□□□ -1.35
SSBP4-215ENST00000625926 XAGE1AQ9HD64 81 aa6.6□□□□□ -1.35
SSBP4-215ENST00000625926 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
SSBP4-215ENST00000625926 MUC2Q02817 5179 aa6.6□□□□□ -1.35
SSBP4-215ENST00000625926 LBHQ53QV2 105 aaPredicted RBP6.59□□□□□ -1.35
SSBP4-215ENST00000625926 COX7B2Q8TF08 81 aa6.59□□□□□ -1.35
SSBP4-215ENST00000625926 C22orf24Q9Y442 160 aa6.59□□□□□ -1.35
SSBP4-215ENST00000625926 TRAPPC1Q9Y5R8 145 aa6.59□□□□□ -1.35
SSBP4-215ENST00000625926 H0Y9J4 135 aa6.58□□□□□ -1.36
SSBP4-215ENST00000625926 H3BRM9 83 aa6.57□□□□□ -1.36
SSBP4-215ENST00000625926 APOC3P02656 99 aa6.57□□□□□ -1.36
SSBP4-215ENST00000625926 SPINK8P0C7L1 97 aa6.57□□□□□ -1.36
SSBP4-215ENST00000625926 LINC00614P0C842 121 aa6.57□□□□□ -1.36
SSBP4-215ENST00000625926 SNAPINO95295 136 aa6.56□□□□□ -1.36
SSBP4-215ENST00000625926 NDUFA6P56556 154 aa6.56□□□□□ -1.36
SSBP4-215ENST00000625926 NDUFA5Q16718 116 aa6.56□□□□□ -1.36
SSBP4-215ENST00000625926 PRR26Q8N8Z3 221 aa6.56□□□□□ -1.36
SSBP4-215ENST00000625926 C18orf32Q8TCD1 76 aa6.56□□□□□ -1.36
SSBP4-215ENST00000625926 A0A096LNJ9 63 aa6.55□□□□□ -1.36
SSBP4-215ENST00000625926 NUPR1O60356 82 aa6.55□□□□□ -1.36
SSBP4-215ENST00000625926 IGLC3P0DOY3 106 aa6.55□□□□□ -1.36
SSBP4-215ENST00000625926 RAB5BP61020 215 aa6.55□□□□□ -1.36
SSBP4-215ENST00000625926 SVBPQ8N300 66 aa6.55□□□□□ -1.36
SSBP4-215ENST00000625926 URB1-AS1Q96HZ7 61 aa6.55□□□□□ -1.36
SSBP4-215ENST00000625926 TP73-AS1Q9UF72 201 aa6.55□□□□□ -1.36
SSBP4-215ENST00000625926 ZNF861PO60384 105 aa6.54□□□□□ -1.36
SSBP4-215ENST00000625926 ATP5LO75964 103 aa6.54□□□□□ -1.36
SSBP4-215ENST00000625926 HBDP02042 147 aa6.54□□□□□ -1.36
SSBP4-215ENST00000625926 MRPL55Q7Z7F7 128 aaKnown RBP6.54□□□□□ -1.36
SSBP4-215ENST00000625926 IGLV1-50A0A075B6I6 118 aa6.53□□□□□ -1.36
SSBP4-215ENST00000625926 PMCHL1Q16048 86 aa6.53□□□□□ -1.36
SSBP4-215ENST00000625926 IGLV5-39A0A0G2JS06 123 aa6.52□□□□□ -1.37
SSBP4-215ENST00000625926 KRTAP1-4P0C5Y4 121 aa6.52□□□□□ -1.37
SSBP4-215ENST00000625926 ZNF22P17026 224 aaPredicted RBP6.52□□□□□ -1.37
SSBP4-215ENST00000625926 TNXBP22105 4242 aa6.51□□□□□ -1.37
SSBP4-215ENST00000625926 BAGE3Q86Y29 109 aa6.51□□□□□ -1.37
SSBP4-215ENST00000625926 LINC00167Q96N53 147 aa6.51□□□□□ -1.37
SSBP4-215ENST00000625926 IGLV5-37A0A075B6J1 123 aa6.5□□□□□ -1.37
SSBP4-215ENST00000625926 RPL37AP8A6NKH3 93 aa6.5□□□□□ -1.37
SSBP4-215ENST00000625926 BCE1O60756 84 aa6.5□□□□□ -1.37
SSBP4-215ENST00000625926 PFN2P35080 140 aa6.5□□□□□ -1.37
SSBP4-215ENST00000625926 RPL13AP40429 203 aaKnown RBP6.5□□□□□ -1.37
SSBP4-215ENST00000625926 RPL28P46779 137 aaKnown RBP6.5□□□□□ -1.37
SSBP4-215ENST00000625926 GAGE10A6NGK3 116 aa6.49□□□□□ -1.37
SSBP4-215ENST00000625926 TMEM170BQ5T4T1 132 aa6.49□□□□□ -1.37
SSBP4-215ENST00000625926 NKAPP1Q8N9T2 125 aa6.49□□□□□ -1.37
SSBP4-215ENST00000625926 ERG28Q9UKR5 140 aa6.49□□□□□ -1.37
SSBP4-215ENST00000625926 C11orf86A6NJI1 115 aa6.48□□□□□ -1.37
SSBP4-215ENST00000625926 COX17Q14061 63 aa6.48□□□□□ -1.37
SSBP4-215ENST00000625926 SFTA2Q6UW10 78 aa6.48□□□□□ -1.37
SSBP4-215ENST00000625926 CHCHD1Q96BP2 118 aaKnown RBP6.48□□□□□ -1.37
SSBP4-215ENST00000625926 YPEL4Q96NS1 127 aa6.48□□□□□ -1.37
SSBP4-215ENST00000625926 CHTOPQ9Y3Y2 248 aaKnown RBP6.48□□□□□ -1.37
SSBP4-215ENST00000625926 ZNF625Q96I27 306 aaPredicted RBP6.47□□□□□ -1.37
SSBP4-215ENST00000625926 SND1-IT1Q9HBX3 110 aa6.47□□□□□ -1.37
SSBP4-215ENST00000625926 TRAV12-1A0A0B4J245 112 aa6.46□□□□□ -1.38
SSBP4-215ENST00000625926 RPL24P83731 157 aaKnown RBP6.46□□□□□ -1.38
SSBP4-215ENST00000625926 S100A1P23297 94 aa6.45□□□□□ -1.38
SSBP4-215ENST00000625926 UBE2AP49459 152 aa6.45□□□□□ -1.38
SSBP4-215ENST00000625926 IFI27L1Q96BM0 104 aa6.45□□□□□ -1.38
SSBP4-215ENST00000625926 IGKV2-28A0A075B6P5 120 aa6.44□□□□□ -1.38
SSBP4-215ENST00000625926 TMEM223A0PJW6 202 aa6.44□□□□□ -1.38
SSBP4-215ENST00000625926 HSBP1O75506 76 aa6.44□□□□□ -1.38
SSBP4-215ENST00000625926 SCO1O75880 301 aa6.44□□□□□ -1.38
SSBP4-215ENST00000625926 IGKV2D-28P01615 120 aa6.44□□□□□ -1.38
SSBP4-215ENST00000625926 VPREB1P12018 145 aa6.44□□□□□ -1.38
SSBP4-215ENST00000625926 CRYGAP11844 174 aa6.43□□□□□ -1.38
SSBP4-215ENST00000625926 LINC00158P58513 81 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms