RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 C6orf226Q5I0X4 101 aa8.95□□□□□ -0.98
C3orf56-201ENST00000624688 PPDPFQ9H3Y8 114 aa8.95□□□□□ -0.98
C3orf56-201ENST00000624688 TRAV10A0A0B4J240 114 aa8.94□□□□□ -0.98
C3orf56-201ENST00000624688 LOC107984156A0A0G2JMH3 177 aa8.94□□□□□ -0.98
C3orf56-201ENST00000624688 GAGE12HA6NDE8 117 aa8.94□□□□□ -0.98
C3orf56-201ENST00000624688 H3BMG7 143 aa8.94□□□□□ -0.98
C3orf56-201ENST00000624688 ARL17AQ8IVW1 177 aa8.94□□□□□ -0.98
C3orf56-201ENST00000624688 HUWE1Q7Z6Z7 4374 aaKnown RBP8.94□□□□□ -0.98
C3orf56-201ENST00000624688 IBA57-AS1B1ANH7 110 aa8.94□□□□□ -0.98
C3orf56-201ENST00000624688 H7C2G1 150 aa8.94□□□□□ -0.98
C3orf56-201ENST00000624688 C2orf82Q6UX34 121 aa8.94□□□□□ -0.98
C3orf56-201ENST00000624688 MIR7-3HGQ8N6C7 128 aa8.94□□□□□ -0.98
C3orf56-201ENST00000624688 MALP21145 153 aa8.93□□□□□ -0.98
C3orf56-201ENST00000624688 LINC00158P58513 81 aa8.92□□□□□ -0.98
C3orf56-201ENST00000624688 COPS9Q8WXC6 57 aa8.92□□□□□ -0.98
C3orf56-201ENST00000624688 TCL1BO95988 128 aa8.91□□□□□ -0.98
C3orf56-201ENST00000624688 UBE2WQ96B02 151 aa8.91□□□□□ -0.98
C3orf56-201ENST00000624688 KLK5Q9Y337 293 aaPredicted RBP8.91□□□□□ -0.98
C3orf56-201ENST00000624688 CRPP02741 224 aa8.91□□□□□ -0.98
C3orf56-201ENST00000624688 PFN2P35080 140 aa8.91□□□□□ -0.98
C3orf56-201ENST00000624688 PSMB2P49721 201 aa8.91□□□□□ -0.98
C3orf56-201ENST00000624688 OCIAD2Q56VL3 154 aa8.91□□□□□ -0.98
C3orf56-201ENST00000624688 PRO0461Q9UI25 63 aa8.91□□□□□ -0.98
C3orf56-201ENST00000624688 NOTCH1P46531 2555 aa8.9□□□□□ -0.98
C3orf56-201ENST00000624688 TRAV8-4A0A0B4J246 113 aa8.9□□□□□ -0.98
C3orf56-201ENST00000624688 TRBV30A0A0K0K1B3 111 aa8.9□□□□□ -0.98
C3orf56-201ENST00000624688 RPL13AP40429 203 aaKnown RBP8.9□□□□□ -0.98
C3orf56-201ENST00000624688 Q1RN00 199 aa8.9□□□□□ -0.98
C3orf56-201ENST00000624688 LYRM7Q5U5X0 104 aa8.9□□□□□ -0.98
C3orf56-201ENST00000624688 KRTAP26-1Q6PEX3 210 aa8.9□□□□□ -0.98
C3orf56-201ENST00000624688 C15orf53Q8NAA6 179 aa8.9□□□□□ -0.98
C3orf56-201ENST00000624688 TRIAP1O43715 76 aa8.89□□□□□ -0.99
C3orf56-201ENST00000624688 CXCL5P42830 114 aa8.89□□□□□ -0.99
C3orf56-201ENST00000624688 CKS1BP61024 79 aa8.89□□□□□ -0.99
C3orf56-201ENST00000624688 LINC01556Q5JQF7 62 aa8.89□□□□□ -0.99
C3orf56-201ENST00000624688 CFAP161Q6P656 301 aa8.89□□□□□ -0.99
C3orf56-201ENST00000624688 TRBV20-1A0A075B6N2 111 aa8.88□□□□□ -0.99
C3orf56-201ENST00000624688 F8W1H4 67 aa8.88□□□□□ -0.99
C3orf56-201ENST00000624688 SCGB1C2P0DMR2 95 aa8.88□□□□□ -0.99
C3orf56-201ENST00000624688 CCL18P55774 89 aa8.88□□□□□ -0.99
C3orf56-201ENST00000624688 K7ERU9 68 aa8.88□□□□□ -0.99
C3orf56-201ENST00000624688 WFDC2Q14508 124 aa8.88□□□□□ -0.99
C3orf56-201ENST00000624688 MTURNQ8N3F0 131 aa8.88□□□□□ -0.99
C3orf56-201ENST00000624688 SPAG11BQ08648 103 aa8.87□□□□□ -0.99
C3orf56-201ENST00000624688 C6orf223Q8N319 242 aa8.87□□□□□ -0.99
C3orf56-201ENST00000624688 SND1-IT1Q9HBX3 110 aa8.87□□□□□ -0.99
C3orf56-201ENST00000624688 LINC00588Q9Y4M8 146 aa8.87□□□□□ -0.99
C3orf56-201ENST00000624688 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
C3orf56-201ENST00000624688 IGKV2D-28P01615 120 aa8.86□□□□□ -0.99
C3orf56-201ENST00000624688 DNAH10OSP0CZ25 163 aa8.86□□□□□ -0.99
C3orf56-201ENST00000624688 SMCPP49901 116 aaPredicted RBP8.85□□□□□ -0.99
C3orf56-201ENST00000624688 C10orf25Q5T742 122 aa8.85□□□□□ -0.99
C3orf56-201ENST00000624688 LINC00526Q96FQ7 95 aa8.85□□□□□ -0.99
C3orf56-201ENST00000624688 B9D2Q9BPU9 175 aa8.85□□□□□ -0.99
C3orf56-201ENST00000624688 PCP4P48539 62 aa8.85□□□□□ -0.99
C3orf56-201ENST00000624688 C9orf116Q5BN46 136 aaPredicted RBP8.85□□□□□ -0.99
C3orf56-201ENST00000624688 UNQ6190/PRO20217Q6UXQ8 127 aa8.85□□□□□ -0.99
C3orf56-201ENST00000624688 NBEAL1Q6ZS30 2694 aa8.84□□□□□ -0.99
C3orf56-201ENST00000624688 COX17Q14061 63 aa8.84□□□□□ -0.99
C3orf56-201ENST00000624688 LINC00337Q8N6G1 96 aa8.84□□□□□ -0.99
C3orf56-201ENST00000624688 NTN5Q8WTR8 489 aaPredicted RBP8.83□□□□□ -1
C3orf56-201ENST00000624688 TRAV13-2A0A0B4J235 113 aa8.82□□□□□ -1
C3orf56-201ENST00000624688 ATXN8Q156A1 80 aa8.82□□□□□ -1
C3orf56-201ENST00000624688 RNF151Q2KHN1 245 aa8.81□□□□□ -1
C3orf56-201ENST00000624688 C15orf56Q8N910 161 aa8.81□□□□□ -1
C3orf56-201ENST00000624688 CLEC2BQ92478 149 aa8.81□□□□□ -1
C3orf56-201ENST00000624688 C1orf43Q9BWL3 253 aa8.81□□□□□ -1
C3orf56-201ENST00000624688 DNAH9Q9NYC9 4486 aa8.81□□□□□ -1
C3orf56-201ENST00000624688 MGAM2Q2M2H8 2515 aa8.8□□□□□ -1
C3orf56-201ENST00000624688 GVQW2A0A096LPI5 108 aaPredicted RBP8.8□□□□□ -1
C3orf56-201ENST00000624688 COX6CP09669 75 aa8.8□□□□□ -1
C3orf56-201ENST00000624688 VPS25Q9BRG1 176 aa8.8□□□□□ -1
C3orf56-201ENST00000624688 ETDBQ3ZM63 59 aa8.8□□□□□ -1
C3orf56-201ENST00000624688 C6orf48Q9UBA6 75 aa8.8□□□□□ -1
C3orf56-201ENST00000624688 IGKV2D-24A0A075B6R9 120 aa8.79□□□□□ -1
C3orf56-201ENST00000624688 LINC01620Q4KN68 170 aa8.79□□□□□ -1
C3orf56-201ENST00000624688 HIGD2BQ4VC39 106 aa8.79□□□□□ -1
C3orf56-201ENST00000624688 UPK3BQ9BT76 320 aa8.79□□□□□ -1
C3orf56-201ENST00000624688 C9JAW5 83 aa8.78□□□□□ -1
C3orf56-201ENST00000624688 LST1O00453 97 aa8.78□□□□□ -1
C3orf56-201ENST00000624688 RPL28P46779 137 aaKnown RBP8.78□□□□□ -1
C3orf56-201ENST00000624688 Q9HAA7 133 aa8.78□□□□□ -1
C3orf56-201ENST00000624688 Q8NDZ9 215 aa8.77□□□□□ -1
C3orf56-201ENST00000624688 ZNF561-AS1K7EIQ3 104 aa8.77□□□□□ -1.01
C3orf56-201ENST00000624688 SLC25A20O43772 301 aa8.77□□□□□ -1.01
C3orf56-201ENST00000624688 NDUFC2O95298 119 aa8.77□□□□□ -1.01
C3orf56-201ENST00000624688 PRR3P79522 188 aaKnown RBP8.77□□□□□ -1.01
C3orf56-201ENST00000624688 MUC7Q8TAX7 377 aa8.77□□□□□ -1.01
C3orf56-201ENST00000624688 SMIM11BQ8TCY0 68 aa8.76□□□□□ -1.01
C3orf56-201ENST00000624688 M0QXV9 152 aa8.75□□□□□ -1.01
C3orf56-201ENST00000624688 C2orf48Q96LS8 159 aa8.75□□□□□ -1.01
C3orf56-201ENST00000624688 LINC01600Q96MT4 127 aa8.75□□□□□ -1.01
C3orf56-201ENST00000624688 CAMK2N2Q96S95 79 aa8.75□□□□□ -1.01
C3orf56-201ENST00000624688 APLNQ9ULZ1 77 aa8.75□□□□□ -1.01
C3orf56-201ENST00000624688 Q6ZRU5 148 aa8.74□□□□□ -1.01
C3orf56-201ENST00000624688 TRBV10-2A0A0K0K1G8 114 aa8.74□□□□□ -1.01
C3orf56-201ENST00000624688 NHLRC4P0CG21 123 aaPredicted RBP8.74□□□□□ -1.01
C3orf56-201ENST00000624688 C21orf62-AS1Q17RA5 79 aa8.74□□□□□ -1.01
C3orf56-201ENST00000624688 FAM218AQ96MZ4 157 aa8.74□□□□□ -1.01
C3orf56-201ENST00000624688 CASC10Q5T4H9 136 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms