RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 FAM236BA0A1B0GV22 79 aa14.76□□□□□ -0.05
LIME1-210ENST00000621325 MAST4O15021 2626 aa14.76□□□□□ -0.05
LIME1-210ENST00000621325 A0A0U1RRA0 63 aa14.75□□□□□ -0.05
LIME1-210ENST00000621325 H7C2G1 150 aa14.74□□□□□ -0.05
LIME1-210ENST00000621325 HTN3P15516 51 aa14.74□□□□□ -0.05
LIME1-210ENST00000621325 A0A0B4J2C4 111 aa14.74□□□□□ -0.05
LIME1-210ENST00000621325 IGHV3-33P01772 117 aa14.74□□□□□ -0.05
LIME1-210ENST00000621325 C3orf22Q8N5N4 141 aa14.74□□□□□ -0.05
LIME1-210ENST00000621325 ATP5G1P05496 136 aa14.73□□□□□ -0.05
LIME1-210ENST00000621325 SPART-AS1P0CW21 52 aa14.73□□□□□ -0.05
LIME1-210ENST00000621325 TIMM17BO60830 172 aa14.73□□□□□ -0.05
LIME1-210ENST00000621325 RETNQ9HD89 108 aa14.73□□□□□ -0.05
LIME1-210ENST00000621325 RPL13AP40429 203 aaKnown RBP14.72□□□□□ -0.05
LIME1-210ENST00000621325 PRIMA1Q86XR5 153 aa14.72□□□□□ -0.05
LIME1-210ENST00000621325 CMYA5Q8N3K9 4069 aa14.72□□□□□ -0.05
LIME1-210ENST00000621325 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.72□□□□□ -0.05
LIME1-210ENST00000621325 IGHV3OR16-9A0A0B4J2B5 98 aa14.72□□□□□ -0.05
LIME1-210ENST00000621325 OR13C6PQ8NH95 151 aa14.72□□□□□ -0.05
LIME1-210ENST00000621325 LINC00959A0A1B0GUT2 108 aa14.71□□□□□ -0.05
LIME1-210ENST00000621325 CLPSL2Q6UWE3 100 aa14.71□□□□□ -0.05
LIME1-210ENST00000621325 BAHCC1Q9P281 2608 aa14.71□□□□□ -0.06
LIME1-210ENST00000621325 A0A1B0GX51 115 aa14.71□□□□□ -0.06
LIME1-210ENST00000621325 Q8N3U1 123 aa14.71□□□□□ -0.06
LIME1-210ENST00000621325 UBE2WQ96B02 151 aa14.71□□□□□ -0.06
LIME1-210ENST00000621325 TRBV7-7A0A0K0K1E9 115 aa14.7□□□□□ -0.06
LIME1-210ENST00000621325 LINC01620Q4KN68 170 aa14.7□□□□□ -0.06
LIME1-210ENST00000621325 C5orf38Q86SI9 138 aa14.7□□□□□ -0.06
LIME1-210ENST00000621325 A0A1B0GUV1 79 aa14.68□□□□□ -0.06
LIME1-210ENST00000621325 CIRBPQ14011 172 aaKnown RBP14.68□□□□□ -0.06
LIME1-210ENST00000621325 TOMM7Q9P0U1 55 aa14.68□□□□□ -0.06
LIME1-210ENST00000621325 ANK2Q01484 3957 aa14.68□□□□□ -0.06
LIME1-210ENST00000621325 EGFEM1PQ0D2K5 195 aa14.67□□□□□ -0.06
LIME1-210ENST00000621325 COX7B2Q8TF08 81 aa14.67□□□□□ -0.06
LIME1-210ENST00000621325 UQCRQO14949 82 aa14.66□□□□□ -0.06
LIME1-210ENST00000621325 XCL1P47992 114 aa14.66□□□□□ -0.06
LIME1-210ENST00000621325 LINC00308Q8TCZ7 52 aa14.66□□□□□ -0.06
LIME1-210ENST00000621325 LINC00526Q96FQ7 95 aa14.66□□□□□ -0.06
LIME1-210ENST00000621325 A0A087WZ39 114 aa14.65□□□□□ -0.06
LIME1-210ENST00000621325 Q1RN00 199 aa14.65□□□□□ -0.06
LIME1-210ENST00000621325 SOSTDC1Q6X4U4 206 aa14.65□□□□□ -0.06
LIME1-210ENST00000621325 COL6A5A8TX70 2615 aa14.65□□□□□ -0.06
LIME1-210ENST00000621325 C4orf26Q17RF5 130 aa14.65□□□□□ -0.06
LIME1-210ENST00000621325 TRBV10-2A0A0K0K1G8 114 aa14.63□□□□□ -0.07
LIME1-210ENST00000621325 ATXN8Q156A1 80 aa14.63□□□□□ -0.07
LIME1-210ENST00000621325 LINC00269Q8N2A0 174 aa14.63□□□□□ -0.07
LIME1-210ENST00000621325 RPS28P62857 69 aaKnown RBP14.61□□□□□ -0.07
LIME1-210ENST00000621325 SS18Q15532 418 aa14.61□□□□□ -0.07
LIME1-210ENST00000621325 C2orf82Q6UX34 121 aa14.61□□□□□ -0.07
LIME1-210ENST00000621325 NOTCH1P46531 2555 aa14.61□□□□□ -0.07
LIME1-210ENST00000621325 HRCT1Q6UXD1 115 aa14.61□□□□□ -0.07
LIME1-210ENST00000621325 TENM3Q9P273 2699 aa14.6□□□□□ -0.07
LIME1-210ENST00000621325 TRIAP1O43715 76 aa14.6□□□□□ -0.07
LIME1-210ENST00000621325 GAGE2AQ6NT46 116 aa14.6□□□□□ -0.07
LIME1-210ENST00000621325 CYSTM1Q9H1C7 97 aa14.6□□□□□ -0.07
LIME1-210ENST00000621325 ICOSQ9Y6W8 199 aa14.6□□□□□ -0.07
LIME1-210ENST00000621325 ANGP03950 147 aaKnown RBP14.59□□□□□ -0.07
LIME1-210ENST00000621325 LINC01600Q96MT4 127 aa14.59□□□□□ -0.07
LIME1-210ENST00000621325 OXTP01178 125 aa14.58□□□□□ -0.07
LIME1-210ENST00000621325 C11orf68Q9H3H3 251 aaKnown RBP14.58□□□□□ -0.08
LIME1-210ENST00000621325 IGLV10-54A0A075B6I4 117 aa14.57□□□□□ -0.08
LIME1-210ENST00000621325 FAM240AA0A1B0GVK7 77 aa14.56□□□□□ -0.08
LIME1-210ENST00000621325 TRBV30A0A0K0K1B3 111 aa14.56□□□□□ -0.08
LIME1-210ENST00000621325 REG3AQ06141 175 aa14.56□□□□□ -0.08
LIME1-210ENST00000621325 LELP1Q5T871 98 aa14.55□□□□□ -0.08
LIME1-210ENST00000621325 MIR7-3HGQ8N6C7 128 aa14.55□□□□□ -0.08
LIME1-210ENST00000621325 hADV29S1A0JD25 119 aa14.54□□□□□ -0.08
LIME1-210ENST00000621325 CHCHD10Q8WYQ3 142 aaPredicted RBP14.54□□□□□ -0.08
LIME1-210ENST00000621325 DNAH3Q8TD57 4116 aa14.54□□□□□ -0.08
LIME1-210ENST00000621325 Q6ZTC4 211 aa14.54□□□□□ -0.08
LIME1-210ENST00000621325 COX7CP15954 63 aa14.53□□□□□ -0.08
LIME1-210ENST00000621325 SMCR5Q8TEV8 140 aa14.53□□□□□ -0.08
LIME1-210ENST00000621325 C6orf226Q5I0X4 101 aa14.53□□□□□ -0.08
LIME1-210ENST00000621325 IMUPQ9GZP8 106 aa14.53□□□□□ -0.08
LIME1-210ENST00000621325 LINC00158P58513 81 aa14.52□□□□□ -0.08
LIME1-210ENST00000621325 Q5XG85 94 aa14.52□□□□□ -0.08
LIME1-210ENST00000621325 DPH3Q96FX2 82 aa14.52□□□□□ -0.08
LIME1-210ENST00000621325 C2orf48Q96LS8 159 aa14.52□□□□□ -0.08
LIME1-210ENST00000621325 PRB2P02812 416 aaPredicted RBP14.52□□□□□ -0.09
LIME1-210ENST00000621325 PFN2P35080 140 aa14.51□□□□□ -0.09
LIME1-210ENST00000621325 CD164L2Q6UWJ8 174 aa14.51□□□□□ -0.09
LIME1-210ENST00000621325 LYPD5Q6UWN5 251 aa14.51□□□□□ -0.09
LIME1-210ENST00000621325 CRYGAP11844 174 aa14.51□□□□□ -0.09
LIME1-210ENST00000621325 COPS9Q8WXC6 57 aa14.5□□□□□ -0.09
LIME1-210ENST00000621325 A0A0J9YWU9 116 aa14.5□□□□□ -0.09
LIME1-210ENST00000621325 DEFB121Q5J5C9 76 aa14.5□□□□□ -0.09
LIME1-210ENST00000621325 DSCR8Q96T75 97 aa14.5□□□□□ -0.09
LIME1-210ENST00000621325 KPRPQ5T749 579 aaPredicted RBP14.49□□□□□ -0.09
LIME1-210ENST00000621325 IBA57-AS1B1ANH7 110 aa14.48□□□□□ -0.09
LIME1-210ENST00000621325 COX7A2LO14548 114 aa14.48□□□□□ -0.09
LIME1-210ENST00000621325 Q8IZM0 81 aa14.48□□□□□ -0.09
LIME1-210ENST00000621325 MRAPQ8TCY5 172 aa14.48□□□□□ -0.09
LIME1-210ENST00000621325 CLEC2BQ92478 149 aa14.48□□□□□ -0.09
LIME1-210ENST00000621325 KLK12Q9UKR0 248 aa14.48□□□□□ -0.09
LIME1-210ENST00000621325 NBEAL1Q6ZS30 2694 aa14.47□□□□□ -0.09
LIME1-210ENST00000621325 NANOS2P60321 138 aaKnown RBP14.46□□□□□ -0.09
LIME1-210ENST00000621325 H3BT86 120 aa14.46□□□□□ -0.09
LIME1-210ENST00000621325 KIAA0087Q14695 138 aa14.46□□□□□ -0.09
LIME1-210ENST00000621325 CCL18P55774 89 aa14.45□□□□□ -0.1
LIME1-210ENST00000621325 LINC01561Q8N1V8 128 aa14.45□□□□□ -0.1
LIME1-210ENST00000621325 TRACP01848 142 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms