RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.63□□□□□ -1.03
CIITA-212ENST00000618207 CIRBPQ14011 172 aaKnown RBP8.63□□□□□ -1.03
CIITA-212ENST00000618207 KRTAP24-1Q3LI83 254 aa8.63□□□□□ -1.03
CIITA-212ENST00000618207 LINC00612Q8N6U2 182 aa8.63□□□□□ -1.03
CIITA-212ENST00000618207 IGLV10-54A0A075B6I4 117 aa8.63□□□□□ -1.03
CIITA-212ENST00000618207 SPANXDQ9BXN6 97 aa8.62□□□□□ -1.03
CIITA-212ENST00000618207 SPANXCQ9NY87 97 aa8.62□□□□□ -1.03
CIITA-212ENST00000618207 A0A0B4J2C4 111 aa8.62□□□□□ -1.03
CIITA-212ENST00000618207 TEN1Q86WV5 123 aa8.62□□□□□ -1.03
CIITA-212ENST00000618207 LYRM9A8MSI8 78 aa8.62□□□□□ -1.03
CIITA-212ENST00000618207 Q8NAQ8 132 aa8.62□□□□□ -1.03
CIITA-212ENST00000618207 WFDC9Q8NEX5 89 aa8.62□□□□□ -1.03
CIITA-212ENST00000618207 TRIAP1O43715 76 aa8.61□□□□□ -1.03
CIITA-212ENST00000618207 SOSTDC1Q6X4U4 206 aa8.61□□□□□ -1.03
CIITA-212ENST00000618207 LINC00308Q8TCZ7 52 aa8.61□□□□□ -1.03
CIITA-212ENST00000618207 LINC00959A0A1B0GUT2 108 aa8.6□□□□□ -1.03
CIITA-212ENST00000618207 H7C423 109 aa8.6□□□□□ -1.03
CIITA-212ENST00000618207 LYRM7Q5U5X0 104 aa8.6□□□□□ -1.03
CIITA-212ENST00000618207 COX7B2Q8TF08 81 aa8.6□□□□□ -1.03
CIITA-212ENST00000618207 ATP5G1P05496 136 aa8.6□□□□□ -1.03
CIITA-212ENST00000618207 PFN2P35080 140 aa8.6□□□□□ -1.03
CIITA-212ENST00000618207 RPL13AP40429 203 aaKnown RBP8.6□□□□□ -1.03
CIITA-212ENST00000618207 KRTAP10-11P60412 298 aa8.6□□□□□ -1.03
CIITA-212ENST00000618207 LINC00269Q8N2A0 174 aa8.6□□□□□ -1.03
CIITA-212ENST00000618207 IGHV3OR16-9A0A0B4J2B5 98 aa8.59□□□□□ -1.03
CIITA-212ENST00000618207 FAM19A3Q7Z5A8 133 aa8.59□□□□□ -1.03
CIITA-212ENST00000618207 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.03
CIITA-212ENST00000618207 SPART-AS1P0CW21 52 aa8.58□□□□□ -1.04
CIITA-212ENST00000618207 CLEC2BQ92478 149 aa8.58□□□□□ -1.04
CIITA-212ENST00000618207 LINC00158P58513 81 aa8.58□□□□□ -1.04
CIITA-212ENST00000618207 CYSRT1A8MQ03 144 aa8.58□□□□□ -1.04
CIITA-212ENST00000618207 MIFP14174 115 aa8.58□□□□□ -1.04
CIITA-212ENST00000618207 ICOSQ9Y6W8 199 aa8.58□□□□□ -1.04
CIITA-212ENST00000618207 PRB2P02812 416 aaPredicted RBP8.57□□□□□ -1.04
CIITA-212ENST00000618207 MIR7-3HGQ8N6C7 128 aa8.57□□□□□ -1.04
CIITA-212ENST00000618207 C6orf226Q5I0X4 101 aa8.57□□□□□ -1.04
CIITA-212ENST00000618207 NBEAL1Q6ZS30 2694 aa8.56□□□□□ -1.04
CIITA-212ENST00000618207 ANK2Q01484 3957 aa8.56□□□□□ -1.04
CIITA-212ENST00000618207 TIMM17BO60830 172 aa8.56□□□□□ -1.04
CIITA-212ENST00000618207 SS18Q15532 418 aa8.56□□□□□ -1.04
CIITA-212ENST00000618207 C2orf82Q6UX34 121 aa8.56□□□□□ -1.04
CIITA-212ENST00000618207 C9orf153Q5TBE3 101 aa8.55□□□□□ -1.04
CIITA-212ENST00000618207 A0A087WZ39 114 aa8.55□□□□□ -1.04
CIITA-212ENST00000618207 SLC25A20O43772 301 aa8.55□□□□□ -1.04
CIITA-212ENST00000618207 HRCT1Q6UXD1 115 aa8.54□□□□□ -1.04
CIITA-212ENST00000618207 PRO0628Q9UI54 55 aa8.54□□□□□ -1.04
CIITA-212ENST00000618207 MGAM2Q2M2H8 2515 aa8.53□□□□□ -1.04
CIITA-212ENST00000618207 C4orf26Q17RF5 130 aa8.53□□□□□ -1.04
CIITA-212ENST00000618207 TRBV30A0A0K0K1B3 111 aa8.53□□□□□ -1.04
CIITA-212ENST00000618207 REG3AQ06141 175 aa8.53□□□□□ -1.04
CIITA-212ENST00000618207 ANKRD29Q8N6D5 301 aa8.53□□□□□ -1.04
CIITA-212ENST00000618207 LINC00526Q96FQ7 95 aa8.53□□□□□ -1.04
CIITA-212ENST00000618207 A0A1B0GUV1 79 aa8.53□□□□□ -1.04
CIITA-212ENST00000618207 COX6CP09669 75 aa8.53□□□□□ -1.04
CIITA-212ENST00000618207 MALP21145 153 aa8.53□□□□□ -1.04
CIITA-212ENST00000618207 ATXN8Q156A1 80 aa8.52□□□□□ -1.05
CIITA-212ENST00000618207 LINC01620Q4KN68 170 aa8.52□□□□□ -1.05
CIITA-212ENST00000618207 C3orf22Q8N5N4 141 aa8.52□□□□□ -1.05
CIITA-212ENST00000618207 C1orf43Q9BWL3 253 aa8.52□□□□□ -1.05
CIITA-212ENST00000618207 KLK12Q9UKR0 248 aa8.52□□□□□ -1.05
CIITA-212ENST00000618207 V9GYY9 64 aa8.52□□□□□ -1.05
CIITA-212ENST00000618207 CHCHD10Q8WYQ3 142 aaPredicted RBP8.52□□□□□ -1.05
CIITA-212ENST00000618207 Q6ZTC4 211 aa8.51□□□□□ -1.05
CIITA-212ENST00000618207 SND1-IT1Q9HBX3 110 aa8.51□□□□□ -1.05
CIITA-212ENST00000618207 C15orf53Q8NAA6 179 aa8.5□□□□□ -1.05
CIITA-212ENST00000618207 C9orf116Q5BN46 136 aaPredicted RBP8.5□□□□□ -1.05
CIITA-212ENST00000618207 KLK5Q9Y337 293 aaPredicted RBP8.5□□□□□ -1.05
CIITA-212ENST00000618207 UQCRQO14949 82 aa8.49□□□□□ -1.05
CIITA-212ENST00000618207 NTN5Q8WTR8 489 aaPredicted RBP8.49□□□□□ -1.05
CIITA-212ENST00000618207 CCL18P55774 89 aa8.48□□□□□ -1.05
CIITA-212ENST00000618207 Q5XG85 94 aa8.48□□□□□ -1.05
CIITA-212ENST00000618207 LINC00337Q8N6G1 96 aa8.48□□□□□ -1.05
CIITA-212ENST00000618207 A0A0J9YWU9 116 aa8.48□□□□□ -1.05
CIITA-212ENST00000618207 FAM236AA0A1B0GUQ0 79 aa8.48□□□□□ -1.05
CIITA-212ENST00000618207 FAM236BA0A1B0GV22 79 aa8.48□□□□□ -1.05
CIITA-212ENST00000618207 COX7A2LO14548 114 aa8.48□□□□□ -1.05
CIITA-212ENST00000618207 TEX49A0A1B0GTD5 131 aa8.47□□□□□ -1.05
CIITA-212ENST00000618207 NANOS2P60321 138 aaKnown RBP8.47□□□□□ -1.05
CIITA-212ENST00000618207 COPS9Q8WXC6 57 aa8.47□□□□□ -1.05
CIITA-212ENST00000618207 IGKV2-28A0A075B6P5 120 aa8.47□□□□□ -1.05
CIITA-212ENST00000618207 IGKV2D-28P01615 120 aa8.47□□□□□ -1.05
CIITA-212ENST00000618207 CRPP02741 224 aa8.47□□□□□ -1.05
CIITA-212ENST00000618207 PRR3P79522 188 aaKnown RBP8.47□□□□□ -1.05
CIITA-212ENST00000618207 KPRPQ5T749 579 aaPredicted RBP8.47□□□□□ -1.05
CIITA-212ENST00000618207 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
CIITA-212ENST00000618207 C6orf223Q8N319 242 aa8.47□□□□□ -1.05
CIITA-212ENST00000618207 UBE2WQ96B02 151 aa8.47□□□□□ -1.05
CIITA-212ENST00000618207 LELP1Q5T871 98 aa8.46□□□□□ -1.05
CIITA-212ENST00000618207 LYPD5Q6UWN5 251 aa8.46□□□□□ -1.05
CIITA-212ENST00000618207 WFDC10BQ8IUB3 73 aa8.46□□□□□ -1.06
CIITA-212ENST00000618207 IBA57-AS1B1ANH7 110 aa8.45□□□□□ -1.06
CIITA-212ENST00000618207 GAGE2AQ6NT46 116 aa8.45□□□□□ -1.06
CIITA-212ENST00000618207 LST1O00453 97 aa8.45□□□□□ -1.06
CIITA-212ENST00000618207 TRBV10-2A0A0K0K1G8 114 aa8.44□□□□□ -1.06
CIITA-212ENST00000618207 PKIGQ9Y2B9 76 aa8.44□□□□□ -1.06
CIITA-212ENST00000618207 Q8IZM0 81 aa8.44□□□□□ -1.06
CIITA-212ENST00000618207 DPH3Q96FX2 82 aa8.44□□□□□ -1.06
CIITA-212ENST00000618207 TRAV8-4A0A0B4J246 113 aa8.44□□□□□ -1.06
CIITA-212ENST00000618207 DEFB121Q5J5C9 76 aa8.44□□□□□ -1.06
CIITA-212ENST00000618207 TRBV7-7A0A0K0K1E9 115 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms