RNA–Protein interactions for RNA: ENST00000617753.4

LTBP4-235, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-235ENST00000617753 CDKN2A-AS1Q9UH64 79 aa10.38□□□□□ -0.75
LTBP4-235ENST00000617753 LINC01549A6NIU2 74 aa10.37□□□□□ -0.75
LTBP4-235ENST00000617753 M0QXV9 152 aa10.37□□□□□ -0.75
LTBP4-235ENST00000617753 FA2HQ7L5A8 372 aa10.37□□□□□ -0.75
LTBP4-235ENST00000617753 MRPL18Q9H0U6 180 aaKnown RBP10.37□□□□□ -0.75
LTBP4-235ENST00000617753 SMCO4Q9NRQ5 59 aa10.37□□□□□ -0.75
LTBP4-235ENST00000617753 FABP9Q0Z7S8 132 aa10.36□□□□□ -0.75
LTBP4-235ENST00000617753 LINC00469Q8N7U9 141 aa10.36□□□□□ -0.75
LTBP4-235ENST00000617753 CARHSP1Q9Y2V2 147 aaKnown RBP10.36□□□□□ -0.75
LTBP4-235ENST00000617753 HMCN2Q8NDA2 5059 aa10.36□□□□□ -0.75
LTBP4-235ENST00000617753 UBE2BP63146 152 aa10.35□□□□□ -0.75
LTBP4-235ENST00000617753 C10orf91Q5T1B1 145 aa10.35□□□□□ -0.75
LTBP4-235ENST00000617753 LINC01546A6NGU7 62 aa10.34□□□□□ -0.75
LTBP4-235ENST00000617753 IGLV7-43P04211 117 aa10.34□□□□□ -0.75
LTBP4-235ENST00000617753 C9orf129Q5T035 196 aaKnown RBP10.34□□□□□ -0.75
LTBP4-235ENST00000617753 TINCRA0A1B0GVN0 87 aa10.33□□□□□ -0.76
LTBP4-235ENST00000617753 F8VRH5 84 aa10.33□□□□□ -0.76
LTBP4-235ENST00000617753 CXCL5P42830 114 aa10.33□□□□□ -0.76
LTBP4-235ENST00000617753 DIRC1Q969H9 104 aa10.33□□□□□ -0.76
LTBP4-235ENST00000617753 KRTAP10-8P60410 259 aa10.32□□□□□ -0.76
LTBP4-235ENST00000617753 KRTAP11-1Q8IUC1 163 aa10.32□□□□□ -0.76
LTBP4-235ENST00000617753 KRTAP7-1Q8IUC3 87 aa10.32□□□□□ -0.76
LTBP4-235ENST00000617753 CST9LQ9H4G1 147 aa10.32□□□□□ -0.76
LTBP4-235ENST00000617753 SMIM1B2RUZ4 78 aa10.31□□□□□ -0.76
LTBP4-235ENST00000617753 PMVKQ15126 192 aa10.31□□□□□ -0.76
LTBP4-235ENST00000617753 PDZD11Q5EBL8 140 aa10.31□□□□□ -0.76
LTBP4-235ENST00000617753 ODF1Q14990 250 aa10.3□□□□□ -0.76
LTBP4-235ENST00000617753 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
LTBP4-235ENST00000617753 TNXBP22105 4242 aa10.3□□□□□ -0.76
LTBP4-235ENST00000617753 IGLV5-45A0A087WSX0 123 aa10.29□□□□□ -0.76
LTBP4-235ENST00000617753 COX7B2Q8TF08 81 aa10.29□□□□□ -0.76
LTBP4-235ENST00000617753 TRAPPC1Q9Y5R8 145 aa10.29□□□□□ -0.76
LTBP4-235ENST00000617753 APOC3P02656 99 aa10.28□□□□□ -0.76
LTBP4-235ENST00000617753 SPINK8P0C7L1 97 aa10.28□□□□□ -0.76
LTBP4-235ENST00000617753 NDUFA5Q16718 116 aa10.28□□□□□ -0.76
LTBP4-235ENST00000617753 H0Y9J4 135 aa10.27□□□□□ -0.77
LTBP4-235ENST00000617753 H3BRM9 83 aa10.27□□□□□ -0.77
LTBP4-235ENST00000617753 NDUFA6P56556 154 aa10.26□□□□□ -0.77
LTBP4-235ENST00000617753 LBHQ53QV2 105 aaPredicted RBP10.26□□□□□ -0.77
LTBP4-235ENST00000617753 C22orf24Q9Y442 160 aa10.26□□□□□ -0.77
LTBP4-235ENST00000617753 SNAPINO95295 136 aa10.25□□□□□ -0.77
LTBP4-235ENST00000617753 SVBPQ8N300 66 aa10.25□□□□□ -0.77
LTBP4-235ENST00000617753 C18orf32Q8TCD1 76 aa10.25□□□□□ -0.77
LTBP4-235ENST00000617753 HBDP02042 147 aa10.24□□□□□ -0.77
LTBP4-235ENST00000617753 LINC00614P0C842 121 aa10.24□□□□□ -0.77
LTBP4-235ENST00000617753 IGLC3P0DOY3 106 aa10.23□□□□□ -0.77
LTBP4-235ENST00000617753 A0A096LNJ9 63 aa10.22□□□□□ -0.77
LTBP4-235ENST00000617753 RAB5BP61020 215 aa10.22□□□□□ -0.77
LTBP4-235ENST00000617753 PMCHL1Q16048 86 aa10.22□□□□□ -0.77
LTBP4-235ENST00000617753 MRPL55Q7Z7F7 128 aaKnown RBP10.22□□□□□ -0.77
LTBP4-235ENST00000617753 PRR26Q8N8Z3 221 aa10.22□□□□□ -0.77
LTBP4-235ENST00000617753 URB1-AS1Q96HZ7 61 aa10.22□□□□□ -0.77
LTBP4-235ENST00000617753 TP73-AS1Q9UF72 201 aa10.22□□□□□ -0.77
LTBP4-235ENST00000617753 NUPR1O60356 82 aa10.21□□□□□ -0.77
LTBP4-235ENST00000617753 ATP5LO75964 103 aa10.21□□□□□ -0.77
LTBP4-235ENST00000617753 IGLV1-50A0A075B6I6 118 aa10.18□□□□□ -0.78
LTBP4-235ENST00000617753 ZNF861PO60384 105 aa10.18□□□□□ -0.78
LTBP4-235ENST00000617753 ZNF22P17026 224 aaPredicted RBP10.18□□□□□ -0.78
LTBP4-235ENST00000617753 IGLV5-39A0A0G2JS06 123 aa10.17□□□□□ -0.78
LTBP4-235ENST00000617753 BAGE3Q86Y29 109 aa10.17□□□□□ -0.78
LTBP4-235ENST00000617753 NKAPP1Q8N9T2 125 aa10.17□□□□□ -0.78
LTBP4-235ENST00000617753 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
LTBP4-235ENST00000617753 PFN2P35080 140 aa10.16□□□□□ -0.78
LTBP4-235ENST00000617753 GAGE10A6NGK3 116 aa10.15□□□□□ -0.78
LTBP4-235ENST00000617753 RPL37AP8A6NKH3 93 aa10.15□□□□□ -0.78
LTBP4-235ENST00000617753 TMEM170BQ5T4T1 132 aa10.15□□□□□ -0.78
LTBP4-235ENST00000617753 LINC00167Q96N53 147 aa10.15□□□□□ -0.78
LTBP4-235ENST00000617753 UBR4Q5T4S7 5183 aa10.14□□□□□ -0.79
LTBP4-235ENST00000617753 C11orf86A6NJI1 115 aa10.14□□□□□ -0.79
LTBP4-235ENST00000617753 BCE1O60756 84 aa10.14□□□□□ -0.79
LTBP4-235ENST00000617753 RPL13AP40429 203 aaKnown RBP10.14□□□□□ -0.79
LTBP4-235ENST00000617753 RPL28P46779 137 aaKnown RBP10.14□□□□□ -0.79
LTBP4-235ENST00000617753 IGLV5-37A0A075B6J1 123 aa10.13□□□□□ -0.79
LTBP4-235ENST00000617753 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
LTBP4-235ENST00000617753 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
LTBP4-235ENST00000617753 CHCHD1Q96BP2 118 aaKnown RBP10.12□□□□□ -0.79
LTBP4-235ENST00000617753 YPEL4Q96NS1 127 aa10.12□□□□□ -0.79
LTBP4-235ENST00000617753 CHTOPQ9Y3Y2 248 aaKnown RBP10.12□□□□□ -0.79
LTBP4-235ENST00000617753 ZNF625Q96I27 306 aaPredicted RBP10.11□□□□□ -0.79
LTBP4-235ENST00000617753 LRP2P98164 4655 aa10.1□□□□□ -0.79
LTBP4-235ENST00000617753 COX17Q14061 63 aa10.1□□□□□ -0.79
LTBP4-235ENST00000617753 SND1-IT1Q9HBX3 110 aa10.1□□□□□ -0.79
LTBP4-235ENST00000617753 IFI27L1Q96BM0 104 aa10.09□□□□□ -0.79
LTBP4-235ENST00000617753 IGKV2-28A0A075B6P5 120 aa10.08□□□□□ -0.8
LTBP4-235ENST00000617753 SCO1O75880 301 aa10.08□□□□□ -0.8
LTBP4-235ENST00000617753 IGKV2D-28P01615 120 aa10.08□□□□□ -0.8
LTBP4-235ENST00000617753 UBE2AP49459 152 aa10.08□□□□□ -0.8
LTBP4-235ENST00000617753 CBLN2Q8IUK8 224 aa10.08□□□□□ -0.8
LTBP4-235ENST00000617753 TRAV12-1A0A0B4J245 112 aa10.07□□□□□ -0.8
LTBP4-235ENST00000617753 HSBP1O75506 76 aa10.07□□□□□ -0.8
LTBP4-235ENST00000617753 RPL24P83731 157 aaKnown RBP10.07□□□□□ -0.8
LTBP4-235ENST00000617753 VPREB1P12018 145 aa10.06□□□□□ -0.8
LTBP4-235ENST00000617753 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
LTBP4-235ENST00000617753 LINC00158P58513 81 aa10.04□□□□□ -0.8
LTBP4-235ENST00000617753 FAM19A2Q8N3H0 131 aa10.04□□□□□ -0.8
LTBP4-235ENST00000617753 TRGC2P03986 189 aa10.02□□□□□ -0.81
LTBP4-235ENST00000617753 CRYGAP11844 174 aa10.02□□□□□ -0.81
LTBP4-235ENST00000617753 KRTAP13-1Q8IUC0 172 aa10.02□□□□□ -0.81
LTBP4-235ENST00000617753 A0A0U1RRA0 63 aa10.01□□□□□ -0.81
LTBP4-235ENST00000617753 H0Y8G0 127 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms