RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 TOMM7Q9P0U1 55 aa11.21□□□□□ -0.61
VCX3A-203ENST00000612369 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.61
VCX3A-203ENST00000612369 MRPL18Q9H0U6 180 aaKnown RBP11.2□□□□□ -0.62
VCX3A-203ENST00000612369 FAM168BA1KXE4 195 aa11.19□□□□□ -0.62
VCX3A-203ENST00000612369 FABP9Q0Z7S8 132 aa11.19□□□□□ -0.62
VCX3A-203ENST00000612369 C1orf137Q5JT78 98 aa11.19□□□□□ -0.62
VCX3A-203ENST00000612369 TINCRA0A1B0GVN0 87 aa11.18□□□□□ -0.62
VCX3A-203ENST00000612369 FA2HQ7L5A8 372 aa11.18□□□□□ -0.62
VCX3A-203ENST00000612369 FAM19A5Q7Z5A7 132 aaPredicted RBP11.18□□□□□ -0.62
VCX3A-203ENST00000612369 SMCO4Q9NRQ5 59 aa11.18□□□□□ -0.62
VCX3A-203ENST00000612369 TNXBP22105 4242 aa11.18□□□□□ -0.62
VCX3A-203ENST00000612369 CXCL5P42830 114 aa11.17□□□□□ -0.62
VCX3A-203ENST00000612369 KRTAP10-8P60410 259 aa11.17□□□□□ -0.62
VCX3A-203ENST00000612369 C9orf129Q5T035 196 aaKnown RBP11.16□□□□□ -0.62
VCX3A-203ENST00000612369 LINC00469Q8N7U9 141 aa11.16□□□□□ -0.62
VCX3A-203ENST00000612369 IGLV5-45A0A087WSX0 123 aa11.15□□□□□ -0.62
VCX3A-203ENST00000612369 F8VRH5 84 aa11.15□□□□□ -0.62
VCX3A-203ENST00000612369 M0QXV9 152 aa11.15□□□□□ -0.62
VCX3A-203ENST00000612369 IGLV7-43P04211 117 aa11.15□□□□□ -0.62
VCX3A-203ENST00000612369 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.62
VCX3A-203ENST00000612369 KRTAP7-1Q8IUC3 87 aa11.15□□□□□ -0.62
VCX3A-203ENST00000612369 CST9LQ9H4G1 147 aa11.15□□□□□ -0.62
VCX3A-203ENST00000612369 PMVKQ15126 192 aa11.14□□□□□ -0.63
VCX3A-203ENST00000612369 SMIM1B2RUZ4 78 aa11.13□□□□□ -0.63
VCX3A-203ENST00000612369 ODF1Q14990 250 aa11.13□□□□□ -0.63
VCX3A-203ENST00000612369 TRAPPC1Q9Y5R8 145 aa11.13□□□□□ -0.63
VCX3A-203ENST00000612369 UBE2BP63146 152 aa11.12□□□□□ -0.63
VCX3A-203ENST00000612369 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
VCX3A-203ENST00000612369 DIRC1Q969H9 104 aa11.12□□□□□ -0.63
VCX3A-203ENST00000612369 SNAPINO95295 136 aa11.11□□□□□ -0.63
VCX3A-203ENST00000612369 APOC3P02656 99 aa11.11□□□□□ -0.63
VCX3A-203ENST00000612369 KRTAP11-1Q8IUC1 163 aa11.11□□□□□ -0.63
VCX3A-203ENST00000612369 COX7B2Q8TF08 81 aa11.11□□□□□ -0.63
VCX3A-203ENST00000612369 LINC00614P0C842 121 aa11.1□□□□□ -0.63
VCX3A-203ENST00000612369 SVBPQ8N300 66 aa11.1□□□□□ -0.63
VCX3A-203ENST00000612369 H3BRM9 83 aa11.09□□□□□ -0.63
VCX3A-203ENST00000612369 C18orf32Q8TCD1 76 aa11.09□□□□□ -0.63
VCX3A-203ENST00000612369 LBHQ53QV2 105 aaPredicted RBP11.08□□□□□ -0.64
VCX3A-203ENST00000612369 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
VCX3A-203ENST00000612369 H0Y9J4 135 aa11.07□□□□□ -0.64
VCX3A-203ENST00000612369 RAB5BP61020 215 aa11.07□□□□□ -0.64
VCX3A-203ENST00000612369 URB1-AS1Q96HZ7 61 aa11.07□□□□□ -0.64
VCX3A-203ENST00000612369 C22orf24Q9Y442 160 aa11.07□□□□□ -0.64
VCX3A-203ENST00000612369 A0A096LNJ9 63 aa11.06□□□□□ -0.64
VCX3A-203ENST00000612369 HBDP02042 147 aa11.06□□□□□ -0.64
VCX3A-203ENST00000612369 SPINK8P0C7L1 97 aa11.06□□□□□ -0.64
VCX3A-203ENST00000612369 IGLC3P0DOY3 106 aa11.06□□□□□ -0.64
VCX3A-203ENST00000612369 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
VCX3A-203ENST00000612369 NUPR1O60356 82 aa11.04□□□□□ -0.64
VCX3A-203ENST00000612369 ATP5LO75964 103 aa11.03□□□□□ -0.64
VCX3A-203ENST00000612369 NDUFA6P56556 154 aa11.03□□□□□ -0.64
VCX3A-203ENST00000612369 IGLV5-39A0A0G2JS06 123 aa11.01□□□□□ -0.65
VCX3A-203ENST00000612369 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
VCX3A-203ENST00000612369 ZNF861PO60384 105 aa11□□□□□ -0.65
VCX3A-203ENST00000612369 ZNF22P17026 224 aaPredicted RBP11□□□□□ -0.65
VCX3A-203ENST00000612369 IGLV1-50A0A075B6I6 118 aa10.99□□□□□ -0.65
VCX3A-203ENST00000612369 PMCHL1Q16048 86 aa10.99□□□□□ -0.65
VCX3A-203ENST00000612369 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
VCX3A-203ENST00000612369 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
VCX3A-203ENST00000612369 PRR26Q8N8Z3 221 aa10.98□□□□□ -0.65
VCX3A-203ENST00000612369 YPEL4Q96NS1 127 aa10.98□□□□□ -0.65
VCX3A-203ENST00000612369 IGLV5-37A0A075B6J1 123 aa10.97□□□□□ -0.65
VCX3A-203ENST00000612369 KRTAP1-4P0C5Y4 121 aa10.97□□□□□ -0.65
VCX3A-203ENST00000612369 CHCHD1Q96BP2 118 aaKnown RBP10.97□□□□□ -0.65
VCX3A-203ENST00000612369 SFTA2Q6UW10 78 aa10.96□□□□□ -0.65
VCX3A-203ENST00000612369 COX17Q14061 63 aa10.95□□□□□ -0.66
VCX3A-203ENST00000612369 LINC00167Q96N53 147 aa10.95□□□□□ -0.66
VCX3A-203ENST00000612369 C11orf86A6NJI1 115 aa10.94□□□□□ -0.66
VCX3A-203ENST00000612369 BCE1O60756 84 aa10.94□□□□□ -0.66
VCX3A-203ENST00000612369 RPL13AP40429 203 aaKnown RBP10.94□□□□□ -0.66
VCX3A-203ENST00000612369 TMEM170BQ5T4T1 132 aa10.94□□□□□ -0.66
VCX3A-203ENST00000612369 NKAPP1Q8N9T2 125 aa10.94□□□□□ -0.66
VCX3A-203ENST00000612369 PFN2P35080 140 aa10.93□□□□□ -0.66
VCX3A-203ENST00000612369 RPL28P46779 137 aaKnown RBP10.93□□□□□ -0.66
VCX3A-203ENST00000612369 ERG28Q9UKR5 140 aa10.93□□□□□ -0.66
VCX3A-203ENST00000612369 CHTOPQ9Y3Y2 248 aaKnown RBP10.93□□□□□ -0.66
VCX3A-203ENST00000612369 TRAV12-1A0A0B4J245 112 aa10.92□□□□□ -0.66
VCX3A-203ENST00000612369 LRP2P98164 4655 aa10.91□□□□□ -0.66
VCX3A-203ENST00000612369 RPL37AP8A6NKH3 93 aa10.91□□□□□ -0.66
VCX3A-203ENST00000612369 IFI27L1Q96BM0 104 aa10.91□□□□□ -0.66
VCX3A-203ENST00000612369 GAGE10A6NGK3 116 aa10.89□□□□□ -0.67
VCX3A-203ENST00000612369 SND1-IT1Q9HBX3 110 aa10.89□□□□□ -0.67
VCX3A-203ENST00000612369 HSBP1O75506 76 aa10.88□□□□□ -0.67
VCX3A-203ENST00000612369 RPL24P83731 157 aaKnown RBP10.88□□□□□ -0.67
VCX3A-203ENST00000612369 CBLN2Q8IUK8 224 aa10.88□□□□□ -0.67
VCX3A-203ENST00000612369 ZNF625Q96I27 306 aaPredicted RBP10.88□□□□□ -0.67
VCX3A-203ENST00000612369 TMEM223A0PJW6 202 aa10.87□□□□□ -0.67
VCX3A-203ENST00000612369 VPREB1P12018 145 aa10.86□□□□□ -0.67
VCX3A-203ENST00000612369 IGKV2-28A0A075B6P5 120 aa10.83□□□□□ -0.68
VCX3A-203ENST00000612369 IGKV2D-28P01615 120 aa10.83□□□□□ -0.68
VCX3A-203ENST00000612369 TRGC2P03986 189 aa10.83□□□□□ -0.68
VCX3A-203ENST00000612369 UBE2AP49459 152 aa10.83□□□□□ -0.68
VCX3A-203ENST00000612369 KRTAP13-1Q8IUC0 172 aa10.83□□□□□ -0.68
VCX3A-203ENST00000612369 FAM19A2Q8N3H0 131 aa10.83□□□□□ -0.68
VCX3A-203ENST00000612369 SCO1O75880 301 aa10.82□□□□□ -0.68
VCX3A-203ENST00000612369 LINC00158P58513 81 aa10.82□□□□□ -0.68
VCX3A-203ENST00000612369 CRYGAP11844 174 aa10.81□□□□□ -0.68
VCX3A-203ENST00000612369 TMEM126AQ9H061 195 aa10.8□□□□□ -0.68
VCX3A-203ENST00000612369 LINC00587B1AMM8 73 aa10.79□□□□□ -0.68
VCX3A-203ENST00000612369 LEPROTL1O95214 131 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms