RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 RETNQ9HD89 108 aa14.85□□□□□ -0.03
GRAMD1A-212ENST00000600231 PPDPFQ9H3Y8 114 aa14.84□□□□□ -0.03
GRAMD1A-212ENST00000600231 IGLV10-54A0A075B6I4 117 aa14.83□□□□□ -0.04
GRAMD1A-212ENST00000600231 IBA57-AS1B1ANH7 110 aa14.83□□□□□ -0.04
GRAMD1A-212ENST00000600231 PFN2P35080 140 aa14.83□□□□□ -0.04
GRAMD1A-212ENST00000600231 REG3AQ06141 175 aa14.83□□□□□ -0.04
GRAMD1A-212ENST00000600231 PPDPFLQ8WWR9 84 aa14.83□□□□□ -0.04
GRAMD1A-212ENST00000600231 ANK2Q01484 3957 aa14.82□□□□□ -0.04
GRAMD1A-212ENST00000600231 EGFEM1PQ0D2K5 195 aa14.81□□□□□ -0.04
GRAMD1A-212ENST00000600231 C21orf62-AS1Q17RA5 79 aa14.81□□□□□ -0.04
GRAMD1A-212ENST00000600231 CD164L2Q6UWJ8 174 aa14.81□□□□□ -0.04
GRAMD1A-212ENST00000600231 CHCHD10Q8WYQ3 142 aaPredicted RBP14.81□□□□□ -0.04
GRAMD1A-212ENST00000600231 GAGE12HA6NDE8 117 aa14.81□□□□□ -0.04
GRAMD1A-212ENST00000600231 M0QXV9 152 aa14.81□□□□□ -0.04
GRAMD1A-212ENST00000600231 LST1O00453 97 aa14.8□□□□□ -0.04
GRAMD1A-212ENST00000600231 LELP1Q5T871 98 aa14.8□□□□□ -0.04
GRAMD1A-212ENST00000600231 Q8IZM0 81 aa14.8□□□□□ -0.04
GRAMD1A-212ENST00000600231 SND1-IT1Q9HBX3 110 aa14.8□□□□□ -0.04
GRAMD1A-212ENST00000600231 TRBV10-2A0A0K0K1G8 114 aa14.8□□□□□ -0.04
GRAMD1A-212ENST00000600231 C2orf82Q6UX34 121 aa14.8□□□□□ -0.04
GRAMD1A-212ENST00000600231 CCL18P55774 89 aa14.79□□□□□ -0.04
GRAMD1A-212ENST00000600231 LINC01561Q8N1V8 128 aa14.78□□□□□ -0.04
GRAMD1A-212ENST00000600231 IGKV2-28A0A075B6P5 120 aa14.77□□□□□ -0.04
GRAMD1A-212ENST00000600231 COX7A2LO14548 114 aa14.77□□□□□ -0.04
GRAMD1A-212ENST00000600231 IGKV2D-28P01615 120 aa14.77□□□□□ -0.04
GRAMD1A-212ENST00000600231 LINC00337Q8N6G1 96 aa14.76□□□□□ -0.05
GRAMD1A-212ENST00000600231 SPATA25Q9BR10 227 aa14.76□□□□□ -0.05
GRAMD1A-212ENST00000600231 CMYA5Q8N3K9 4069 aa14.76□□□□□ -0.05
GRAMD1A-212ENST00000600231 LINC01600Q96MT4 127 aa14.75□□□□□ -0.05
GRAMD1A-212ENST00000600231 TENM3Q9P273 2699 aa14.75□□□□□ -0.05
GRAMD1A-212ENST00000600231 KIAA0087Q14695 138 aa14.75□□□□□ -0.05
GRAMD1A-212ENST00000600231 NTN5Q8WTR8 489 aaPredicted RBP14.75□□□□□ -0.05
GRAMD1A-212ENST00000600231 TRAV13-2A0A0B4J235 113 aa14.74□□□□□ -0.05
GRAMD1A-212ENST00000600231 LYPD5Q6UWN5 251 aa14.74□□□□□ -0.05
GRAMD1A-212ENST00000600231 COL6A5A8TX70 2615 aa14.74□□□□□ -0.05
GRAMD1A-212ENST00000600231 CRPP02741 224 aa14.73□□□□□ -0.05
GRAMD1A-212ENST00000600231 CKS1BP61024 79 aa14.73□□□□□ -0.05
GRAMD1A-212ENST00000600231 NOTCH1P46531 2555 aa14.73□□□□□ -0.05
GRAMD1A-212ENST00000600231 MALP21145 153 aa14.73□□□□□ -0.05
GRAMD1A-212ENST00000600231 KLK12Q9UKR0 248 aa14.72□□□□□ -0.05
GRAMD1A-212ENST00000600231 Q6ZTC4 211 aa14.71□□□□□ -0.05
GRAMD1A-212ENST00000600231 SIGMAR1Q99720 223 aa14.71□□□□□ -0.05
GRAMD1A-212ENST00000600231 TEX49A0A1B0GTD5 131 aa14.7□□□□□ -0.06
GRAMD1A-212ENST00000600231 H3BT86 120 aa14.7□□□□□ -0.06
GRAMD1A-212ENST00000600231 KPRPQ5T749 579 aaPredicted RBP14.69□□□□□ -0.06
GRAMD1A-212ENST00000600231 CFAP161Q6P656 301 aa14.69□□□□□ -0.06
GRAMD1A-212ENST00000600231 CDIP1Q9H305 208 aa14.69□□□□□ -0.06
GRAMD1A-212ENST00000600231 PRR34Q9NV39 138 aa14.69□□□□□ -0.06
GRAMD1A-212ENST00000600231 RPL28P46779 137 aaKnown RBP14.68□□□□□ -0.06
GRAMD1A-212ENST00000600231 ENHOQ6UWT2 76 aa14.67□□□□□ -0.06
GRAMD1A-212ENST00000600231 CYSRT1A8MQ03 144 aa14.66□□□□□ -0.06
GRAMD1A-212ENST00000600231 CXCL5P42830 114 aa14.66□□□□□ -0.06
GRAMD1A-212ENST00000600231 FAM218AQ96MZ4 157 aa14.66□□□□□ -0.06
GRAMD1A-212ENST00000600231 H3BNG1 76 aa14.65□□□□□ -0.06
GRAMD1A-212ENST00000600231 C9orf116Q5BN46 136 aaPredicted RBP14.65□□□□□ -0.06
GRAMD1A-212ENST00000600231 SMIM11BQ8TCY0 68 aa14.65□□□□□ -0.06
GRAMD1A-212ENST00000600231 A0A0J9YWU9 116 aa14.65□□□□□ -0.06
GRAMD1A-212ENST00000600231 UBE2WQ96B02 151 aa14.65□□□□□ -0.06
GRAMD1A-212ENST00000600231 BAHCC1Q9P281 2608 aa14.64□□□□□ -0.07
GRAMD1A-212ENST00000600231 WFDC10BQ8IUB3 73 aa14.64□□□□□ -0.07
GRAMD1A-212ENST00000600231 KLK5Q9Y337 293 aaPredicted RBP14.63□□□□□ -0.07
GRAMD1A-212ENST00000600231 C6orf223Q8N319 242 aa14.62□□□□□ -0.07
GRAMD1A-212ENST00000600231 LINC00526Q96FQ7 95 aa14.62□□□□□ -0.07
GRAMD1A-212ENST00000600231 NANOS2P60321 138 aaKnown RBP14.62□□□□□ -0.07
GRAMD1A-212ENST00000600231 COX17Q14061 63 aa14.62□□□□□ -0.07
GRAMD1A-212ENST00000600231 OR13C6PQ8NH95 151 aa14.62□□□□□ -0.07
GRAMD1A-212ENST00000600231 TRACP01848 142 aa14.61□□□□□ -0.07
GRAMD1A-212ENST00000600231 DNAH3Q8TD57 4116 aa14.61□□□□□ -0.07
GRAMD1A-212ENST00000600231 TRAV8-4A0A0B4J246 113 aa14.61□□□□□ -0.07
GRAMD1A-212ENST00000600231 SPAG11BQ08648 103 aa14.6□□□□□ -0.07
GRAMD1A-212ENST00000600231 C10orf25Q5T742 122 aa14.6□□□□□ -0.07
GRAMD1A-212ENST00000600231 NBEAL1Q6ZS30 2694 aa14.6□□□□□ -0.07
GRAMD1A-212ENST00000600231 PRR3P79522 188 aaKnown RBP14.59□□□□□ -0.07
GRAMD1A-212ENST00000600231 UNQ6190/PRO20217Q6UXQ8 127 aa14.59□□□□□ -0.07
GRAMD1A-212ENST00000600231 ESRGQ1W209 222 aa14.58□□□□□ -0.08
GRAMD1A-212ENST00000600231 C11orf45Q8TAV5 145 aa14.58□□□□□ -0.08
GRAMD1A-212ENST00000600231 PRB2P02812 416 aaPredicted RBP14.57□□□□□ -0.08
GRAMD1A-212ENST00000600231 DEFB131BA0A096LNP1 70 aa14.57□□□□□ -0.08
GRAMD1A-212ENST00000600231 XGP55808 180 aa14.57□□□□□ -0.08
GRAMD1A-212ENST00000600231 Q9HAA7 133 aa14.56□□□□□ -0.08
GRAMD1A-212ENST00000600231 BAALC-AS2P0C853 105 aa14.55□□□□□ -0.08
GRAMD1A-212ENST00000600231 A0A087WYN8 130 aa14.54□□□□□ -0.08
GRAMD1A-212ENST00000600231 MT-ATP8P03928 68 aa14.54□□□□□ -0.08
GRAMD1A-212ENST00000600231 H0YGX0 51 aa14.53□□□□□ -0.08
GRAMD1A-212ENST00000600231 NDUFC2O95298 119 aa14.53□□□□□ -0.08
GRAMD1A-212ENST00000600231 Q8NDZ9 215 aa14.52□□□□□ -0.08
GRAMD1A-212ENST00000600231 DEFB121Q5J5C9 76 aa14.52□□□□□ -0.09
GRAMD1A-212ENST00000600231 C22orf24Q9Y442 160 aa14.51□□□□□ -0.09
GRAMD1A-212ENST00000600231 SCGB1A1P11684 91 aa14.49□□□□□ -0.09
GRAMD1A-212ENST00000600231 KRTAP26-1Q6PEX3 210 aa14.49□□□□□ -0.09
GRAMD1A-212ENST00000600231 DNAL4O96015 105 aa14.48□□□□□ -0.09
GRAMD1A-212ENST00000600231 MGAM2Q2M2H8 2515 aa14.47□□□□□ -0.09
GRAMD1A-212ENST00000600231 C6orf48Q9UBA6 75 aa14.47□□□□□ -0.09
GRAMD1A-212ENST00000600231 NCR3O14931 201 aa14.46□□□□□ -0.09
GRAMD1A-212ENST00000600231 LECT2O14960 151 aa14.46□□□□□ -0.09
GRAMD1A-212ENST00000600231 TMEM126AQ9H061 195 aa14.46□□□□□ -0.09
GRAMD1A-212ENST00000600231 GVQW2A0A096LPI5 108 aaPredicted RBP14.45□□□□□ -0.1
GRAMD1A-212ENST00000600231 HIGD2BQ4VC39 106 aa14.45□□□□□ -0.1
GRAMD1A-212ENST00000600231 MRAPQ8TCY5 172 aa14.45□□□□□ -0.1
GRAMD1A-212ENST00000600231 MUC7Q8TAX7 377 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms