RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 A0A1B0GVG6 124 aa8.75□□□□□ -1.01
EBI3-202ENST00000599339 PRR4Q16378 134 aa8.75□□□□□ -1.01
EBI3-202ENST00000599339 FAM19A3Q7Z5A8 133 aa8.75□□□□□ -1.01
EBI3-202ENST00000599339 LINC00469Q8N7U9 141 aa8.75□□□□□ -1.01
EBI3-202ENST00000599339 GEMIN7Q9H840 131 aaKnown RBP8.75□□□□□ -1.01
EBI3-202ENST00000599339 C22orf24Q9Y442 160 aa8.75□□□□□ -1.01
EBI3-202ENST00000599339 IGIPA6NJ69 53 aa8.74□□□□□ -1.01
EBI3-202ENST00000599339 F8VRH5 84 aa8.74□□□□□ -1.01
EBI3-202ENST00000599339 CXCL5P42830 114 aa8.74□□□□□ -1.01
EBI3-202ENST00000599339 XAGE1AQ9HD64 81 aa8.74□□□□□ -1.01
EBI3-202ENST00000599339 CTDSP1Q9GZU7 261 aa8.73□□□□□ -1.01
EBI3-202ENST00000599339 TP73-AS1Q9UF72 201 aa8.73□□□□□ -1.01
EBI3-202ENST00000599339 RPL28P46779 137 aaKnown RBP8.72□□□□□ -1.01
EBI3-202ENST00000599339 TIMM17AQ99595 171 aa8.72□□□□□ -1.01
EBI3-202ENST00000599339 CDKN2A-AS1Q9UH64 79 aa8.72□□□□□ -1.01
EBI3-202ENST00000599339 MRPL55Q7Z7F7 128 aaKnown RBP8.71□□□□□ -1.02
EBI3-202ENST00000599339 RAB14P61106 215 aa8.69□□□□□ -1.02
EBI3-202ENST00000599339 TOMM6Q96B49 74 aa8.69□□□□□ -1.02
EBI3-202ENST00000599339 BCE1O60756 84 aa8.68□□□□□ -1.02
EBI3-202ENST00000599339 ERASQ7Z444 233 aa8.68□□□□□ -1.02
EBI3-202ENST00000599339 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
EBI3-202ENST00000599339 LINC01549A6NIU2 74 aa8.67□□□□□ -1.02
EBI3-202ENST00000599339 CRYGAP11844 174 aa8.67□□□□□ -1.02
EBI3-202ENST00000599339 PDZD11Q5EBL8 140 aa8.67□□□□□ -1.02
EBI3-202ENST00000599339 COX7B2Q8TF08 81 aa8.67□□□□□ -1.02
EBI3-202ENST00000599339 SMIM1B2RUZ4 78 aa8.66□□□□□ -1.02
EBI3-202ENST00000599339 A0A0U1RQV1 116 aa8.65□□□□□ -1.02
EBI3-202ENST00000599339 TINCRA0A1B0GVN0 87 aa8.65□□□□□ -1.02
EBI3-202ENST00000599339 TSPAN13O95857 204 aa8.65□□□□□ -1.02
EBI3-202ENST00000599339 LINC00167Q96N53 147 aa8.65□□□□□ -1.02
EBI3-202ENST00000599339 RPL37AP8A6NKH3 93 aa8.64□□□□□ -1.03
EBI3-202ENST00000599339 KIAA1644Q3SXP7 199 aa8.64□□□□□ -1.03
EBI3-202ENST00000599339 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
EBI3-202ENST00000599339 TYMSOSQ8TAI1 123 aa8.64□□□□□ -1.03
EBI3-202ENST00000599339 TRAV9-1A0A075B6T8 112 aa8.63□□□□□ -1.03
EBI3-202ENST00000599339 IGLV5-45A0A087WSX0 123 aa8.63□□□□□ -1.03
EBI3-202ENST00000599339 A0A087X002 238 aa8.62□□□□□ -1.03
EBI3-202ENST00000599339 GAGE10A6NGK3 116 aa8.62□□□□□ -1.03
EBI3-202ENST00000599339 UBE2AP49459 152 aa8.62□□□□□ -1.03
EBI3-202ENST00000599339 IGLV5-37A0A075B6J1 123 aa8.61□□□□□ -1.03
EBI3-202ENST00000599339 H3BRM9 83 aa8.61□□□□□ -1.03
EBI3-202ENST00000599339 ADCYAP1P18509 176 aa8.61□□□□□ -1.03
EBI3-202ENST00000599339 RAB5BP61020 215 aa8.61□□□□□ -1.03
EBI3-202ENST00000599339 MRPL18Q9H0U6 180 aaKnown RBP8.61□□□□□ -1.03
EBI3-202ENST00000599339 CST9LQ9H4G1 147 aa8.61□□□□□ -1.03
EBI3-202ENST00000599339 ATP5LO75964 103 aa8.6□□□□□ -1.03
EBI3-202ENST00000599339 PMVKQ15126 192 aa8.6□□□□□ -1.03
EBI3-202ENST00000599339 SPINK8P0C7L1 97 aa8.59□□□□□ -1.03
EBI3-202ENST00000599339 S100PP25815 95 aa8.59□□□□□ -1.03
EBI3-202ENST00000599339 GNB1LQ9BYB4 327 aa8.59□□□□□ -1.03
EBI3-202ENST00000599339 LINC01546A6NGU7 62 aa8.58□□□□□ -1.04
EBI3-202ENST00000599339 FAM229BQ4G0N7 80 aa8.58□□□□□ -1.04
EBI3-202ENST00000599339 FA2HQ7L5A8 372 aa8.58□□□□□ -1.04
EBI3-202ENST00000599339 SMCO4Q9NRQ5 59 aa8.58□□□□□ -1.04
EBI3-202ENST00000599339 COX19Q49B96 90 aa8.57□□□□□ -1.04
EBI3-202ENST00000599339 KRTAP13-1Q8IUC0 172 aa8.57□□□□□ -1.04
EBI3-202ENST00000599339 CLLU1Q5K131 121 aa8.56□□□□□ -1.04
EBI3-202ENST00000599339 UQCC3Q6UW78 93 aa8.56□□□□□ -1.04
EBI3-202ENST00000599339 ANAPC11Q9NYG5 84 aa8.56□□□□□ -1.04
EBI3-202ENST00000599339 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
EBI3-202ENST00000599339 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
EBI3-202ENST00000599339 PFN2P35080 140 aa8.55□□□□□ -1.04
EBI3-202ENST00000599339 LINC00304Q8N9R0 145 aa8.55□□□□□ -1.04
EBI3-202ENST00000599339 IGKV2D-26A0A0A0MRZ7 120 aa8.54□□□□□ -1.04
EBI3-202ENST00000599339 TMEM218A2RU14 115 aa8.54□□□□□ -1.04
EBI3-202ENST00000599339 RPL24P83731 157 aaKnown RBP8.54□□□□□ -1.04
EBI3-202ENST00000599339 KRTAP13-2Q52LG2 175 aa8.54□□□□□ -1.04
EBI3-202ENST00000599339 MUC2Q02817 5179 aa8.54□□□□□ -1.04
EBI3-202ENST00000599339 IGLC3P0DOY3 106 aa8.53□□□□□ -1.04
EBI3-202ENST00000599339 FABP9Q0Z7S8 132 aa8.53□□□□□ -1.04
EBI3-202ENST00000599339 FAM19A1Q7Z5A9 133 aa8.53□□□□□ -1.04
EBI3-202ENST00000599339 IGLV5-39A0A0G2JS06 123 aa8.52□□□□□ -1.05
EBI3-202ENST00000599339 SCO1O75880 301 aa8.52□□□□□ -1.05
EBI3-202ENST00000599339 NDUFA6P56556 154 aa8.52□□□□□ -1.05
EBI3-202ENST00000599339 COX17Q14061 63 aa8.52□□□□□ -1.05
EBI3-202ENST00000599339 ERG28Q9UKR5 140 aa8.52□□□□□ -1.05
EBI3-202ENST00000599339 VPREB1P12018 145 aa8.51□□□□□ -1.05
EBI3-202ENST00000599339 CTAG1AP78358 180 aa8.51□□□□□ -1.05
EBI3-202ENST00000599339 PRLHP81277 87 aa8.51□□□□□ -1.05
EBI3-202ENST00000599339 SFTA2Q6UW10 78 aa8.51□□□□□ -1.05
EBI3-202ENST00000599339 SEC11CQ9BY50 192 aa8.51□□□□□ -1.05
EBI3-202ENST00000599339 TMEM126AQ9H061 195 aa8.51□□□□□ -1.05
EBI3-202ENST00000599339 SND1-IT1Q9HBX3 110 aa8.51□□□□□ -1.05
EBI3-202ENST00000599339 RETNLBQ9BQ08 111 aa8.5□□□□□ -1.05
EBI3-202ENST00000599339 ZNF22P17026 224 aaPredicted RBP8.49□□□□□ -1.05
EBI3-202ENST00000599339 CDIP1Q9H305 208 aa8.49□□□□□ -1.05
EBI3-202ENST00000599339 TMEM238C9JI98 176 aa8.48□□□□□ -1.05
EBI3-202ENST00000599339 M0R378 163 aa8.47□□□□□ -1.05
EBI3-202ENST00000599339 HBDP02042 147 aa8.47□□□□□ -1.05
EBI3-202ENST00000599339 TPRXLQ17RH7 258 aa8.47□□□□□ -1.05
EBI3-202ENST00000599339 CBLN2Q8IUK8 224 aa8.47□□□□□ -1.05
EBI3-202ENST00000599339 ZNF625Q96I27 306 aaPredicted RBP8.47□□□□□ -1.05
EBI3-202ENST00000599339 IGLV7-46A0A075B6I9 117 aa8.46□□□□□ -1.06
EBI3-202ENST00000599339 LINC00614P0C842 121 aa8.46□□□□□ -1.06
EBI3-202ENST00000599339 A0A096LNJ9 63 aa8.45□□□□□ -1.06
EBI3-202ENST00000599339 RHEBQ15382 184 aa8.45□□□□□ -1.06
EBI3-202ENST00000599339 TMEM170BQ5T4T1 132 aa8.45□□□□□ -1.06
EBI3-202ENST00000599339 BAGE3Q86Y29 109 aa8.45□□□□□ -1.06
EBI3-202ENST00000599339 PLEKHB2Q96CS7 222 aa8.45□□□□□ -1.06
EBI3-202ENST00000599339 HIGD2AQ9BW72 106 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms