RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SNAPINO95295 136 aa8.95□□□□□ -0.98
PNKP-202ENST00000593706 C2orf82Q6UX34 121 aa8.95□□□□□ -0.98
PNKP-202ENST00000593706 FAM19A5Q7Z5A7 132 aaPredicted RBP8.95□□□□□ -0.98
PNKP-202ENST00000593706 SLC7A5P1Q8MH63 180 aa8.95□□□□□ -0.98
PNKP-202ENST00000593706 FAM168BA1KXE4 195 aa8.94□□□□□ -0.98
PNKP-202ENST00000593706 PAPPA-AS1Q5QFB9 102 aa8.94□□□□□ -0.98
PNKP-202ENST00000593706 YPEL4Q96NS1 127 aa8.94□□□□□ -0.98
PNKP-202ENST00000593706 CDKN2A-AS1Q9UH64 79 aa8.94□□□□□ -0.98
PNKP-202ENST00000593706 TRBV30A0A0K0K1B3 111 aa8.93□□□□□ -0.98
PNKP-202ENST00000593706 HERVK_113P63121 156 aa8.93□□□□□ -0.98
PNKP-202ENST00000593706 FABP9Q0Z7S8 132 aa8.93□□□□□ -0.98
PNKP-202ENST00000593706 NDUFA5Q16718 116 aa8.93□□□□□ -0.98
PNKP-202ENST00000593706 KRTAP7-1Q8IUC3 87 aa8.93□□□□□ -0.98
PNKP-202ENST00000593706 URB1-AS1Q96HZ7 61 aa8.93□□□□□ -0.98
PNKP-202ENST00000593706 SCGB3A1Q96QR1 104 aa8.93□□□□□ -0.98
PNKP-202ENST00000593706 MUC2Q02817 5179 aa8.92□□□□□ -0.98
PNKP-202ENST00000593706 IGLV5-45A0A087WSX0 123 aa8.92□□□□□ -0.98
PNKP-202ENST00000593706 A0A096LNJ9 63 aa8.92□□□□□ -0.98
PNKP-202ENST00000593706 GAGE2EQ4V326 116 aa8.92□□□□□ -0.98
PNKP-202ENST00000593706 Q8IZM0 81 aa8.92□□□□□ -0.98
PNKP-202ENST00000593706 GAGE2DQ9UEU5 116 aa8.92□□□□□ -0.98
PNKP-202ENST00000593706 IGLV1-50A0A075B6I6 118 aa8.91□□□□□ -0.98
PNKP-202ENST00000593706 LINC01549A6NIU2 74 aa8.91□□□□□ -0.98
PNKP-202ENST00000593706 UBE2BP63146 152 aa8.91□□□□□ -0.98
PNKP-202ENST00000593706 SEC11AP67812 179 aa8.91□□□□□ -0.98
PNKP-202ENST00000593706 CST9LQ9H4G1 147 aa8.91□□□□□ -0.98
PNKP-202ENST00000593706 TINCRA0A1B0GVN0 87 aa8.9□□□□□ -0.98
PNKP-202ENST00000593706 NDUFC2-KCTD14E9PQ53 114 aa8.9□□□□□ -0.98
PNKP-202ENST00000593706 M0QXV9 152 aa8.9□□□□□ -0.98
PNKP-202ENST00000593706 KRTAP11-1Q8IUC1 163 aa8.9□□□□□ -0.98
PNKP-202ENST00000593706 C18orf32Q8TCD1 76 aa8.9□□□□□ -0.98
PNKP-202ENST00000593706 SMIM1B2RUZ4 78 aa8.89□□□□□ -0.99
PNKP-202ENST00000593706 C9orf129Q5T035 196 aaKnown RBP8.89□□□□□ -0.99
PNKP-202ENST00000593706 FA2HQ7L5A8 372 aa8.89□□□□□ -0.99
PNKP-202ENST00000593706 CBLN2Q8IUK8 224 aa8.89□□□□□ -0.99
PNKP-202ENST00000593706 GEMIN7Q9H840 131 aaKnown RBP8.89□□□□□ -0.99
PNKP-202ENST00000593706 TRAPPC1Q9Y5R8 145 aa8.89□□□□□ -0.99
PNKP-202ENST00000593706 RPL13AP40429 203 aaKnown RBP8.87□□□□□ -0.99
PNKP-202ENST00000593706 PMVKQ15126 192 aa8.87□□□□□ -0.99
PNKP-202ENST00000593706 PRR4Q16378 134 aa8.87□□□□□ -0.99
PNKP-202ENST00000593706 LINC00469Q8N7U9 141 aa8.87□□□□□ -0.99
PNKP-202ENST00000593706 PACRGQ96M98 296 aaPredicted RBP8.87□□□□□ -0.99
PNKP-202ENST00000593706 TOMM7Q9P0U1 55 aa8.87□□□□□ -0.99
PNKP-202ENST00000593706 PRSS2P07478 247 aa8.86□□□□□ -0.99
PNKP-202ENST00000593706 KRTAP1-4P0C5Y4 121 aa8.86□□□□□ -0.99
PNKP-202ENST00000593706 C6orf226Q5I0X4 101 aa8.86□□□□□ -0.99
PNKP-202ENST00000593706 SMCO4Q9NRQ5 59 aa8.86□□□□□ -0.99
PNKP-202ENST00000593706 F8VRH5 84 aa8.85□□□□□ -0.99
PNKP-202ENST00000593706 CKS1BP61024 79 aa8.85□□□□□ -0.99
PNKP-202ENST00000593706 PDZD11Q5EBL8 140 aa8.85□□□□□ -0.99
PNKP-202ENST00000593706 LINC00614P0C842 121 aa8.84□□□□□ -0.99
PNKP-202ENST00000593706 IGLC3P0DOY3 106 aa8.84□□□□□ -0.99
PNKP-202ENST00000593706 CXCL5P42830 114 aa8.83□□□□□ -1
PNKP-202ENST00000593706 PMCHL1Q16048 86 aa8.83□□□□□ -1
PNKP-202ENST00000593706 IGLV5-39A0A0G2JS06 123 aa8.82□□□□□ -1
PNKP-202ENST00000593706 HBDP02042 147 aa8.82□□□□□ -1
PNKP-202ENST00000593706 SPINK8P0C7L1 97 aa8.82□□□□□ -1
PNKP-202ENST00000593706 COX7B2Q8TF08 81 aa8.82□□□□□ -1
PNKP-202ENST00000593706 A0A0U1RQV1 116 aa8.8□□□□□ -1
PNKP-202ENST00000593706 ZNF22P17026 224 aaPredicted RBP8.8□□□□□ -1
PNKP-202ENST00000593706 XAGE1AQ9HD64 81 aa8.8□□□□□ -1
PNKP-202ENST00000593706 ZNF861PO60384 105 aa8.78□□□□□ -1
PNKP-202ENST00000593706 RAB5BP61020 215 aa8.78□□□□□ -1
PNKP-202ENST00000593706 H3BRM9 83 aa8.77□□□□□ -1.01
PNKP-202ENST00000593706 NUPR1O60356 82 aa8.77□□□□□ -1.01
PNKP-202ENST00000593706 ATP5LO75964 103 aa8.77□□□□□ -1.01
PNKP-202ENST00000593706 C11orf86A6NJI1 115 aa8.76□□□□□ -1.01
PNKP-202ENST00000593706 COLCA2A8K830 154 aa8.76□□□□□ -1.01
PNKP-202ENST00000593706 TSPAN13O95857 204 aa8.76□□□□□ -1.01
PNKP-202ENST00000593706 TRGC2P03986 189 aa8.76□□□□□ -1.01
PNKP-202ENST00000593706 CHCHD1Q96BP2 118 aaKnown RBP8.76□□□□□ -1.01
PNKP-202ENST00000593706 TP73-AS1Q9UF72 201 aa8.76□□□□□ -1.01
PNKP-202ENST00000593706 C22orf24Q9Y442 160 aa8.76□□□□□ -1.01
PNKP-202ENST00000593706 NDUFA6P56556 154 aa8.75□□□□□ -1.01
PNKP-202ENST00000593706 LBHQ53QV2 105 aaPredicted RBP8.75□□□□□ -1.01
PNKP-202ENST00000593706 SCO1O75880 301 aa8.74□□□□□ -1.01
PNKP-202ENST00000593706 LINC00310P59036 64 aa8.74□□□□□ -1.01
PNKP-202ENST00000593706 BAGE3Q86Y29 109 aa8.74□□□□□ -1.01
PNKP-202ENST00000593706 IGLV5-37A0A075B6J1 123 aa8.73□□□□□ -1.01
PNKP-202ENST00000593706 RPL28P46779 137 aaKnown RBP8.73□□□□□ -1.01
PNKP-202ENST00000593706 TRAV12-1A0A0B4J245 112 aa8.72□□□□□ -1.01
PNKP-202ENST00000593706 MRPL55Q7Z7F7 128 aaKnown RBP8.72□□□□□ -1.01
PNKP-202ENST00000593706 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.02
PNKP-202ENST00000593706 TMA7Q9Y2S6 64 aaKnown RBP8.71□□□□□ -1.02
PNKP-202ENST00000593706 A0A087X002 238 aa8.7□□□□□ -1.02
PNKP-202ENST00000593706 BCE1O60756 84 aa8.7□□□□□ -1.02
PNKP-202ENST00000593706 CRYGAP11844 174 aa8.7□□□□□ -1.02
PNKP-202ENST00000593706 FAM19A2Q8N3H0 131 aa8.7□□□□□ -1.02
PNKP-202ENST00000593706 TYMSOSQ8TAI1 123 aa8.7□□□□□ -1.02
PNKP-202ENST00000593706 IFI27L1Q96BM0 104 aa8.7□□□□□ -1.02
PNKP-202ENST00000593706 CHTOPQ9Y3Y2 248 aaKnown RBP8.7□□□□□ -1.02
PNKP-202ENST00000593706 TMEM170BQ5T4T1 132 aa8.69□□□□□ -1.02
PNKP-202ENST00000593706 TMEM223A0PJW6 202 aa8.68□□□□□ -1.02
PNKP-202ENST00000593706 SERF1AO75920 110 aa8.68□□□□□ -1.02
PNKP-202ENST00000593706 LINC00167Q96N53 147 aa8.68□□□□□ -1.02
PNKP-202ENST00000593706 ERG28Q9UKR5 140 aa8.68□□□□□ -1.02
PNKP-202ENST00000593706 RPL37AP8A6NKH3 93 aa8.67□□□□□ -1.02
PNKP-202ENST00000593706 HSBP1O75506 76 aa8.67□□□□□ -1.02
PNKP-202ENST00000593706 PFN2P35080 140 aa8.67□□□□□ -1.02
PNKP-202ENST00000593706 COX17Q14061 63 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms